RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 MRPL20Q9BYC9 149 aaKnown RBP2.68□□□□□ -1.98
PTPRC-213ENST00000529828 RIBC2Q9H4K1 309 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 LINC00574Q9H8X3 128 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 PLCXD1Q9NUJ7 323 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 GFOD1Q9NXC2 390 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 H2AFY2Q9P0M6 372 aaPredicted RBP2.68□□□□□ -1.98
PTPRC-213ENST00000529828 GNG12Q9UBI6 72 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 FOXA2Q9Y261 457 aaPredicted RBP2.68□□□□□ -1.98
PTPRC-213ENST00000529828 MRPS28Q9Y2Q9 187 aaKnown RBP2.68□□□□□ -1.98
PTPRC-213ENST00000529828 TMEM30CPA0ZSE6 113 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 GABRPO00591 440 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 NBR2O15453 112 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 OR7C1O76099 320 aaPredicted RBP2.68□□□□□ -1.98
PTPRC-213ENST00000529828 RGS11O94810 467 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 HLA-DRB1P01911 266 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 APOA1P02647 267 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 CAPGP40121 348 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 OR3A3P47888 321 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 SYNJ2BPP57105 145 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 CD81P60033 236 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 VAMP2P63027 116 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 GNGT1P63211 74 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 ZNF85Q03923 595 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 PLGLAQ15195 96 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 KISS1Q15726 138 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 C5orf64Q2M2E5 130 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 C19orf54Q5BKX5 351 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 ZNF691Q5VV52 312 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 TMEM244Q5VVB8 128 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 NXNL2Q5VZ03 156 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 SLC25A48Q6ZT89 311 aaKnown RBP2.68□□□□□ -1.98
PTPRC-213ENST00000529828 LINC00311Q8N616 119 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 ZNF439Q8NDP4 499 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 OR10A7Q8NGE5 316 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 OR51A2Q8NGJ7 313 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 NEK7Q8TDX7 302 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 GATAD1Q8WUU5 269 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 FLYWCH2Q96CP2 140 aaKnown RBP2.68□□□□□ -1.98
PTPRC-213ENST00000529828 C10orf35Q96D05 121 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 GPER1Q99527 375 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 THAP7Q9BT49 309 aaPredicted RBP2.68□□□□□ -1.98
PTPRC-213ENST00000529828 FBXL15Q9H469 300 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 ZNF580Q9UK33 172 aa2.68□□□□□ -1.98
PTPRC-213ENST00000529828 A0A075B6Q4 140 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 A0A1W2PP11 408 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 RAB19A4D1S5 217 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 AIPO00170 330 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 FCN1O00602 326 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 GEMIN2O14893 280 aaKnown RBP2.67□□□□□ -1.98
PTPRC-213ENST00000529828 SNX3O60493 162 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 CDRT1O95170 752 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 HTR3BO95264 441 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 TRBV12-3P01733 135 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 TRGV3P03979 118 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 CD7P09564 240 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 EGR2P11161 476 aaPredicted RBP2.67□□□□□ -1.98
PTPRC-213ENST00000529828 FHITP49789 147 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 DAPP51397 102 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 CX3CL1P78423 397 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 ADARB1P78563 741 aaKnown RBP2.67□□□□□ -1.98
PTPRC-213ENST00000529828 FLOT2Q14254 428 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 IL13RA2Q14627 380 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 RSU1Q15404 277 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 ACTBL2Q562R1 376 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 ATAD3CQ5T2N8 411 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 STEAP3Q658P3 488 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 UNQ5815/PRO19632Q6UWF5 114 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 FAM131AQ6UXB0 335 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 IL34Q6ZMJ4 242 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 Q6ZNX1 250 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 SLC16A12Q6ZSM3 486 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 LHFPL3Q86UP9 236 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 PPP1R27Q86WC6 154 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 GID4Q8IVV7 300 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 SAXO1Q8IYX7 474 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 ZBTB34Q8NCN2 500 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 CCDC54Q8NEL0 328 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 LFNGQ8NES3 379 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 OR52L2PQ8NGH6 319 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 OR9G4Q8NGQ1 327 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 OR4K15Q8NH41 348 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 CANT1Q8WVQ1 401 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 RHOVQ96L33 236 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 RDH12Q96NR8 316 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 SRD5A3Q9H8P0 318 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 ZC4H2Q9NQZ6 224 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 ZNF355PQ9NSJ1 428 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 CNOT2Q9NZN8 540 aaKnown RBP2.67□□□□□ -1.98
PTPRC-213ENST00000529828 ST3GAL6Q9Y274 331 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 LRRC42Q9Y546 428 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 SHISA3A0PJX4 238 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 A4D1N5 150 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 B2RBV5 119 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 ANKRD65E5RJM6 399 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 H0Y980 276 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 SULT1C4O75897 302 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 HBZP02008 142 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 MT-ND2P03891 347 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 TFAP2AP05549 437 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 HTR1AP08908 422 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms