RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.75□□□□□ -0.37
TSPAN4-218ENST00000529566 OR8U1Q8NH10 309 aa12.75□□□□□ -0.37
TSPAN4-218ENST00000529566 LIN7CQ9NUP9 197 aaKnown RBP12.75□□□□□ -0.37
TSPAN4-218ENST00000529566 ANXA10Q9UJ72 324 aa12.75□□□□□ -0.37
TSPAN4-218ENST00000529566 ZNF221Q9UK13 617 aa12.75□□□□□ -0.37
TSPAN4-218ENST00000529566 OR5H14A6NHG9 310 aa12.74□□□□□ -0.37
TSPAN4-218ENST00000529566 ADARB2-AS1A8MUL3 147 aa12.74□□□□□ -0.37
TSPAN4-218ENST00000529566 M0QZ24 198 aa12.74□□□□□ -0.37
TSPAN4-218ENST00000529566 FBXO24O75426 580 aa12.74□□□□□ -0.37
TSPAN4-218ENST00000529566 CTXN2P0C2S0 81 aa12.74□□□□□ -0.37
TSPAN4-218ENST00000529566 CNTFRP26992 372 aa12.74□□□□□ -0.37
TSPAN4-218ENST00000529566 C10orf99Q6UWK7 81 aa12.74□□□□□ -0.37
TSPAN4-218ENST00000529566 FAM131AQ6UXB0 335 aa12.74□□□□□ -0.37
TSPAN4-218ENST00000529566 DRAXINQ8NBI3 349 aaPredicted RBP12.74□□□□□ -0.37
TSPAN4-218ENST00000529566 NPBQ8NG41 125 aa12.74□□□□□ -0.37
TSPAN4-218ENST00000529566 OR5AU1Q8NGC0 362 aa12.74□□□□□ -0.37
TSPAN4-218ENST00000529566 ACOT12Q8WYK0 555 aa12.74□□□□□ -0.37
TSPAN4-218ENST00000529566 CMTM3Q96MX0 182 aa12.74□□□□□ -0.37
TSPAN4-218ENST00000529566 GINS4Q9BRT9 223 aa12.74□□□□□ -0.37
TSPAN4-218ENST00000529566 SDHAF2Q9NX18 166 aa12.74□□□□□ -0.37
TSPAN4-218ENST00000529566 COMMD3Q9UBI1 195 aa12.74□□□□□ -0.37
TSPAN4-218ENST00000529566 PEX14O75381 377 aa12.73□□□□□ -0.37
TSPAN4-218ENST00000529566 APOA1P02647 267 aa12.73□□□□□ -0.37
TSPAN4-218ENST00000529566 MC5RP33032 325 aa12.73□□□□□ -0.37
TSPAN4-218ENST00000529566 RPL5P46777 297 aaKnown RBP12.73□□□□□ -0.37
TSPAN4-218ENST00000529566 TAS2R20P59543 309 aa12.73□□□□□ -0.37
TSPAN4-218ENST00000529566 CD83Q01151 205 aa12.73□□□□□ -0.37
TSPAN4-218ENST00000529566 SPCS2Q15005 226 aa12.73□□□□□ -0.37
TSPAN4-218ENST00000529566 TREML4Q6UXN2 200 aa12.73□□□□□ -0.37
TSPAN4-218ENST00000529566 CENPVQ7Z7K6 275 aaPredicted RBP12.73□□□□□ -0.37
TSPAN4-218ENST00000529566 SNAPC3Q92966 411 aa12.73□□□□□ -0.37
TSPAN4-218ENST00000529566 NOL4LQ96MY1 436 aaPredicted RBP12.73□□□□□ -0.37
TSPAN4-218ENST00000529566 CITED2Q99967 270 aaPredicted RBP12.73□□□□□ -0.37
TSPAN4-218ENST00000529566 HSPB9Q9BQS6 159 aa12.73□□□□□ -0.37
TSPAN4-218ENST00000529566 OR2D2Q9H210 308 aa12.73□□□□□ -0.37
TSPAN4-218ENST00000529566 TET2Q6N021 2002 aaPredicted RBP12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 M0R1X1 148 aa12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 TUSC2O75896 110 aa12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 NDUFA3O95167 84 aa12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 TSPAN15O95858 294 aa12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 HLA-DQB1P01920 261 aa12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 ZNF182P17025 639 aaPredicted RBP12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 ELK1P19419 428 aa12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 NFYAP23511 347 aaPredicted RBP12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 MMDQ15546 238 aa12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 TMEM69Q5SWH9 247 aa12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 SLC35E3Q7Z769 313 aa12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 BEST4Q8NFU0 473 aa12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 RASL11BQ9BPW5 248 aa12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 ZNF107Q9UII5 783 aaPredicted RBP12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 ANAPC10Q9UM13 185 aa12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 WASHC3Q9Y3C0 194 aa12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 OR2W1Q9Y3N9 320 aa12.72□□□□□ -0.37
TSPAN4-218ENST00000529566 IGKV1D-13A0A0B4J2D9 117 aa12.71□□□□□ -0.37
TSPAN4-218ENST00000529566 NBR2O15453 112 aa12.71□□□□□ -0.37
TSPAN4-218ENST00000529566 HPGDSO60760 199 aa12.71□□□□□ -0.37
TSPAN4-218ENST00000529566 IGLV2-14P01704 120 aa12.71□□□□□ -0.37
TSPAN4-218ENST00000529566 IGKV1-16P04430 117 aa12.71□□□□□ -0.37
TSPAN4-218ENST00000529566 IGKV1-13P0DP09 117 aa12.71□□□□□ -0.37
TSPAN4-218ENST00000529566 CBX5P45973 191 aa12.71□□□□□ -0.37
TSPAN4-218ENST00000529566 TMBIM6P55061 237 aa12.71□□□□□ -0.37
TSPAN4-218ENST00000529566 C5orf64Q2M2E5 130 aa12.71□□□□□ -0.37
TSPAN4-218ENST00000529566 CLVS1Q8IUQ0 354 aaPredicted RBP12.71□□□□□ -0.37
TSPAN4-218ENST00000529566 RNF5Q99942 180 aa12.71□□□□□ -0.37
TSPAN4-218ENST00000529566 LINC00527Q9UJ94 153 aa12.71□□□□□ -0.37
TSPAN4-218ENST00000529566 RBBP9O75884 186 aa12.7□□□□□ -0.38
TSPAN4-218ENST00000529566 NAT1P18440 290 aa12.7□□□□□ -0.38
TSPAN4-218ENST00000529566 SOX6P35712 828 aa12.7□□□□□ -0.38
TSPAN4-218ENST00000529566 C2orf68Q2NKX9 166 aa12.7□□□□□ -0.38
TSPAN4-218ENST00000529566 ZNF329Q86UD4 541 aa12.7□□□□□ -0.38
TSPAN4-218ENST00000529566 NDUFA11Q86Y39 141 aa12.7□□□□□ -0.38
TSPAN4-218ENST00000529566 STPG2Q8N412 459 aa12.7□□□□□ -0.38
TSPAN4-218ENST00000529566 RAB2BQ8WUD1 216 aa12.7□□□□□ -0.38
TSPAN4-218ENST00000529566 CHPT1Q8WUD6 406 aa12.7□□□□□ -0.38
TSPAN4-218ENST00000529566 BCL7BQ9BQE9 202 aa12.7□□□□□ -0.38
TSPAN4-218ENST00000529566 MMP27Q9H306 513 aa12.7□□□□□ -0.38
TSPAN4-218ENST00000529566 PSMB11A5LHX3 300 aa12.69□□□□□ -0.38
TSPAN4-218ENST00000529566 MEIS3P1A6NDR6 274 aa12.69□□□□□ -0.38
TSPAN4-218ENST00000529566 H7C2Y5 167 aa12.69□□□□□ -0.38
TSPAN4-218ENST00000529566 AP4M1O00189 453 aa12.69□□□□□ -0.38
TSPAN4-218ENST00000529566 HLA-DRB1P01911 266 aa12.69□□□□□ -0.38
TSPAN4-218ENST00000529566 FCER2P06734 321 aa12.69□□□□□ -0.38
TSPAN4-218ENST00000529566 CSF1P09603 554 aa12.69□□□□□ -0.38
TSPAN4-218ENST00000529566 LUMP51884 338 aaPredicted RBP12.69□□□□□ -0.38
TSPAN4-218ENST00000529566 DDB2Q92466 427 aa12.69□□□□□ -0.38
TSPAN4-218ENST00000529566 AP3S1Q92572 193 aa12.69□□□□□ -0.38
TSPAN4-218ENST00000529566 ZNF580Q9UK33 172 aa12.69□□□□□ -0.38
TSPAN4-218ENST00000529566 PLXNB1O43157 2135 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 IGHV7-81A0A0B4J1V7 117 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 LINC00473A8K010 186 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 J3QRK9 145 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 FCN1O00602 326 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 RRHO14718 337 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 KCNAB3O43448 404 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 IGF1P05019 195 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 DUTP33316 252 aaKnown RBP12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 PRSS3P35030 304 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 ARPC4P59998 168 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 CFHR3Q02985 330 aa12.68□□□□□ -0.38
TSPAN4-218ENST00000529566 EIF4EBP1Q13541 118 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms