RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 OR5H14A6NHG9 310 aa12.19□□□□□ -0.46
CAPN1-213ENST00000527897 H0YJW9 148 aa12.19□□□□□ -0.46
CAPN1-213ENST00000527897 ITGB1BP1O14713 200 aa12.19□□□□□ -0.46
CAPN1-213ENST00000527897 ATP6V0E1O15342 81 aa12.19□□□□□ -0.46
CAPN1-213ENST00000527897 SDC2P34741 201 aa12.19□□□□□ -0.46
CAPN1-213ENST00000527897 LINC00205P59089 165 aa12.19□□□□□ -0.46
CAPN1-213ENST00000527897 KIR2DS1Q14954 304 aa12.19□□□□□ -0.46
CAPN1-213ENST00000527897 FOXB2Q5VYV0 432 aa12.19□□□□□ -0.46
CAPN1-213ENST00000527897 LIN54Q6MZP7 749 aa12.19□□□□□ -0.46
CAPN1-213ENST00000527897 ETV3LQ6ZN32 361 aa12.19□□□□□ -0.46
CAPN1-213ENST00000527897 MRPL41Q8IXM3 137 aaKnown RBP12.19□□□□□ -0.46
CAPN1-213ENST00000527897 OR10J5Q8NHC4 309 aa12.19□□□□□ -0.46
CAPN1-213ENST00000527897 ABHD5Q8WTS1 349 aa12.19□□□□□ -0.46
CAPN1-213ENST00000527897 CLCC1Q96S66 551 aa12.19□□□□□ -0.46
CAPN1-213ENST00000527897 GINS4Q9BRT9 223 aa12.19□□□□□ -0.46
CAPN1-213ENST00000527897 NECAP2Q9NVZ3 263 aa12.19□□□□□ -0.46
CAPN1-213ENST00000527897 ELF5Q9UKW6 265 aaPredicted RBP12.19□□□□□ -0.46
CAPN1-213ENST00000527897 WASHC3Q9Y3C0 194 aa12.19□□□□□ -0.46
CAPN1-213ENST00000527897 A3GALT2U3KPV4 340 aa12.19□□□□□ -0.46
CAPN1-213ENST00000527897 G3V318 75 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 M0R1X1 148 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 HLA-DRB1P01911 266 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 CLEC2LP0C7M8 214 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 OR8U9P0C7N5 309 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 CD36P16671 472 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 MC5RP33032 325 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 SERPINB10P48595 397 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 THBS3P49746 956 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 FOXE3Q13461 319 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 DEFB136Q30KP8 78 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 CDNFQ49AH0 187 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 SFXN4Q6P4A7 337 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 TPRA1Q86W33 373 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 LINC00482Q8N8I6 264 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 NPBQ8NG41 125 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 OR8U1Q8NH10 309 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 LGALS14Q8TCE9 139 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 MRAPQ8TCY5 172 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 PTX4Q96A99 478 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 RCC1LQ96I51 464 aaKnown RBP12.18□□□□□ -0.46
CAPN1-213ENST00000527897 OR2D2Q9H210 308 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 OR51J1Q9H342 316 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 GHITMQ9H3K2 345 aa12.18□□□□□ -0.46
CAPN1-213ENST00000527897 IGHV7-81A0A0B4J1V7 117 aa12.17□□□□□ -0.46
CAPN1-213ENST00000527897 RRHO14718 337 aa12.17□□□□□ -0.46
CAPN1-213ENST00000527897 NDUFA3O95167 84 aa12.17□□□□□ -0.46
CAPN1-213ENST00000527897 APOA2P02652 100 aa12.17□□□□□ -0.46
CAPN1-213ENST00000527897 IGF1P05019 195 aa12.17□□□□□ -0.46
CAPN1-213ENST00000527897 TFAP2AP05549 437 aa12.17□□□□□ -0.46
CAPN1-213ENST00000527897 ELANEP08246 267 aa12.17□□□□□ -0.46
CAPN1-213ENST00000527897 OR5H8P0DN80 308 aa12.17□□□□□ -0.46
CAPN1-213ENST00000527897 RPS16P62249 146 aaKnown RBP12.17□□□□□ -0.46
CAPN1-213ENST00000527897 ECSCRQ19T08 205 aa12.17□□□□□ -0.46
CAPN1-213ENST00000527897 KCTD21Q4G0X4 260 aa12.17□□□□□ -0.46
CAPN1-213ENST00000527897 TMEM65Q6PI78 240 aa12.17□□□□□ -0.46
CAPN1-213ENST00000527897 AURKAIP1Q9NWT8 199 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-213ENST00000527897 TRAV41A0A0B4J266 112 aa12.16□□□□□ -0.46
CAPN1-213ENST00000527897 J3QRK9 145 aa12.16□□□□□ -0.46
CAPN1-213ENST00000527897 CCL24O00175 119 aa12.16□□□□□ -0.46
CAPN1-213ENST00000527897 IGHG4P01861 327 aa12.16□□□□□ -0.46
CAPN1-213ENST00000527897 SLC6A1P30531 599 aa12.16□□□□□ -0.46
CAPN1-213ENST00000527897 HOXD3P31249 432 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-213ENST00000527897 MYCNOSP40205 109 aa12.16□□□□□ -0.46
CAPN1-213ENST00000527897 CFHR3Q02985 330 aa12.16□□□□□ -0.46
CAPN1-213ENST00000527897 IDNKQ5T6J7 187 aa12.16□□□□□ -0.46
CAPN1-213ENST00000527897 REC114Q7Z4M0 266 aa12.16□□□□□ -0.46
CAPN1-213ENST00000527897 ZNF383Q8NA42 475 aa12.16□□□□□ -0.46
CAPN1-213ENST00000527897 OR5AN1Q8NGI8 311 aa12.16□□□□□ -0.46
CAPN1-213ENST00000527897 RAX2Q96IS3 184 aa12.16□□□□□ -0.46
CAPN1-213ENST00000527897 CABLES2Q9BTV7 478 aa12.16□□□□□ -0.46
CAPN1-213ENST00000527897 ST6GALNAC5Q9BVH7 336 aa12.16□□□□□ -0.46
CAPN1-213ENST00000527897 SLC35D1Q9NTN3 355 aa12.16□□□□□ -0.46
CAPN1-213ENST00000527897 METTL1Q9UBP6 276 aaKnown RBP12.16□□□□□ -0.46
CAPN1-213ENST00000527897 DNAH3Q8TD57 4116 aa12.15□□□□□ -0.46
CAPN1-213ENST00000527897 IGKV1D-8A0A087WSZ0 117 aa12.15□□□□□ -0.46
CAPN1-213ENST00000527897 TRBV6-7A0A0A0MS04 114 aa12.15□□□□□ -0.46
CAPN1-213ENST00000527897 TMEM235A6NFC5 223 aa12.15□□□□□ -0.46
CAPN1-213ENST00000527897 FCN1O00602 326 aa12.15□□□□□ -0.46
CAPN1-213ENST00000527897 PROP1O75360 226 aa12.15□□□□□ -0.46
CAPN1-213ENST00000527897 RBBP9O75884 186 aa12.15□□□□□ -0.46
CAPN1-213ENST00000527897 DUS4LO95620 317 aaKnown RBP12.15□□□□□ -0.46
CAPN1-213ENST00000527897 IGKV1-16P04430 117 aa12.15□□□□□ -0.46
CAPN1-213ENST00000527897 NDPQ00604 133 aa12.15□□□□□ -0.46
CAPN1-213ENST00000527897 ARL6IP1Q15041 203 aa12.15□□□□□ -0.46
CAPN1-213ENST00000527897 NUDCD2Q8WVJ2 157 aa12.15□□□□□ -0.46
CAPN1-213ENST00000527897 DPF1Q92782 380 aa12.15□□□□□ -0.46
CAPN1-213ENST00000527897 OR5B12Q96R08 314 aa12.15□□□□□ -0.46
CAPN1-213ENST00000527897 CENPOQ9BU64 300 aa12.15□□□□□ -0.46
CAPN1-213ENST00000527897 KLK15Q9H2R5 256 aa12.15□□□□□ -0.46
CAPN1-213ENST00000527897 A0A1W2PN81 502 aa12.14□□□□□ -0.47
CAPN1-213ENST00000527897 PSMB8P28062 276 aa12.14□□□□□ -0.47
CAPN1-213ENST00000527897 CHRNA7P36544 502 aa12.14□□□□□ -0.47
CAPN1-213ENST00000527897 CDX1P47902 265 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-213ENST00000527897 GNG2P59768 71 aa12.14□□□□□ -0.47
CAPN1-213ENST00000527897 CX3CL1P78423 397 aa12.14□□□□□ -0.47
CAPN1-213ENST00000527897 PSG5Q15238 335 aa12.14□□□□□ -0.47
CAPN1-213ENST00000527897 HACD4Q5VWC8 232 aa12.14□□□□□ -0.47
CAPN1-213ENST00000527897 PDPNQ86YL7 162 aa12.14□□□□□ -0.47
CAPN1-213ENST00000527897 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-213ENST00000527897 CASTOR1Q8WTX7 329 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms