RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 CT45A3Q8NHU0 189 aa7.99□□□□□ -1.13
SPARC-205ENST00000522348 SCARB1Q8WTV0 552 aa7.99□□□□□ -1.13
SPARC-205ENST00000522348 ADTRPQ96IZ2 230 aa7.99□□□□□ -1.13
SPARC-205ENST00000522348 S1PR3Q99500 378 aa7.99□□□□□ -1.13
SPARC-205ENST00000522348 ABHD14AQ9BUJ0 271 aa7.99□□□□□ -1.13
SPARC-205ENST00000522348 GSX2Q9BZM3 304 aa7.99□□□□□ -1.13
SPARC-205ENST00000522348 C19orf12Q9NSK7 152 aa7.99□□□□□ -1.13
SPARC-205ENST00000522348 COA4Q9NYJ1 87 aa7.99□□□□□ -1.13
SPARC-205ENST00000522348 MMP24Q9Y5R2 645 aa7.99□□□□□ -1.13
SPARC-205ENST00000522348 DYSFO75923 2080 aa7.99□□□□□ -1.13
SPARC-205ENST00000522348 CHD3Q12873 2000 aaKnown RBP7.98□□□□□ -1.13
SPARC-205ENST00000522348 C17orf98A8MV24 154 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 WRBO00258 174 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 RBFOX2O43251 390 aaKnown RBP eCLIP7.98□□□□□ -1.13
SPARC-205ENST00000522348 HPRT1P00492 218 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 CFDP00746 253 aaPredicted RBP7.98□□□□□ -1.13
SPARC-205ENST00000522348 F12P00748 615 aaPredicted RBP7.98□□□□□ -1.13
SPARC-205ENST00000522348 IGKV1-39P01597 117 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 IGKV1D-39P04432 117 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 HTR2BP41595 481 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 THBS3P49746 956 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 AKR1C2P52895 323 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 VAMP2P63027 116 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 CXorf66Q5JRM2 361 aaPredicted RBP7.98□□□□□ -1.13
SPARC-205ENST00000522348 CLLU1Q5K131 121 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 BTNL3Q6UXE8 466 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 SLC25A48Q6ZT89 311 aaKnown RBP7.98□□□□□ -1.13
SPARC-205ENST00000522348 ZNF439Q8NDP4 499 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 OR8B3Q8NGG8 313 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 ST8SIA2Q92186 375 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 PHYHIPLQ96FC7 376 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 NEIL1Q96FI4 390 aaPredicted RBP7.98□□□□□ -1.13
SPARC-205ENST00000522348 C5orf30Q96GV9 206 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 OR8B2Q96RD0 313 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 SPOCK3Q9BQ16 436 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 ZNF471Q9BX82 626 aaPredicted RBP7.98□□□□□ -1.13
SPARC-205ENST00000522348 SLC25A31Q9H0C2 315 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 IFI27L2Q9H2X8 130 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 CHODLQ9H9P2 273 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 CTSZQ9UBR2 303 aa7.98□□□□□ -1.13
SPARC-205ENST00000522348 RCL1Q9Y2P8 373 aaKnown RBP7.98□□□□□ -1.13
SPARC-205ENST00000522348 KLF2Q9Y5W3 355 aaPredicted RBP7.98□□□□□ -1.13
SPARC-205ENST00000522348 PCNX1Q96RV3 2341 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 NBEAQ8NFP9 2946 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 hCG_1809904A0A1W2PP81 198 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 A0A1W2PPE2 198 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 A0A1W2PR64 198 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 A0A1W2PRV1 198 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 LINC00473A8K010 186 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 FAM90A26D6RGX4 464 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 M0R1X1 148 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 PPIHO43447 177 aaKnown RBP7.97□□□□□ -1.13
SPARC-205ENST00000522348 KCNAB3O43448 404 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 CHST1O43916 411 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 ATP6V1G1O75348 118 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 PROP1O75360 226 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 IGKV1-5P01602 117 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 TPT1P13693 172 aaKnown RBP7.97□□□□□ -1.13
SPARC-205ENST00000522348 EFNA4P52798 201 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 BRWD1-AS2P59051 145 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 POLR2GP62487 172 aaKnown RBP eCLIP7.97□□□□□ -1.13
SPARC-205ENST00000522348 TAGLNQ01995 201 aaKnown RBP7.97□□□□□ -1.13
SPARC-205ENST00000522348 ZNF816Q0VGE8 651 aaPredicted RBP7.97□□□□□ -1.13
SPARC-205ENST00000522348 ZNF273Q14593 569 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 PRAMEF5Q5TYX0 476 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 NCR3LG1Q68D85 454 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 ZNF841Q6ZN19 808 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 SLC7A5P1Q8MH63 180 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 LINC00311Q8N616 119 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 DMBX1Q8NFW5 382 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 RAB40CQ96S21 281 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 C11orf1Q9H5F2 150 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 UBTD1Q9HAC8 227 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.97□□□□□ -1.13
SPARC-205ENST00000522348 CACFD1Q9UGQ2 172 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 ATRXP46100 2492 aa7.97□□□□□ -1.13
SPARC-205ENST00000522348 A0A087X0M5 115 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 A0A0G2JRQ6 117 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 A0A1B0GX30 115 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 MSGN1A6NI15 193 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 FAM90A9PA6NNJ1 464 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 KIAA1324LA8MWY0 1029 aaPredicted RBP7.96□□□□□ -1.14
SPARC-205ENST00000522348 TOR1AO14656 332 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 SLC31A2O15432 143 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 RAMP3O60896 148 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 MED6O75586 246 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 FCN3O75636 299 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 MMP23AO75900 390 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 JTBO76095 146 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 SPDEFO95238 335 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 KRASP01116 189 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 IGHV3-7P01780 117 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 EPHA1P21709 976 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 S100A1P23297 94 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 DLX6P56179 175 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 TAS2R30P59541 319 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 RPL23AP62750 156 aaKnown RBP7.96□□□□□ -1.14
SPARC-205ENST00000522348 TLE4Q04727 773 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 RPL39P5Q59GN2 51 aa7.96□□□□□ -1.14
SPARC-205ENST00000522348 EIF5AL1Q6IS14 154 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms