RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 HSPA12AO43301 675 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 PAX6P26367 422 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 GPR12P47775 334 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 LGALS7P47929 136 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 TAS2R20P59543 309 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 CD83Q01151 205 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 TMEM177Q53S58 311 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 IGSF11Q5DX21 431 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 DHRS11Q6UWP2 260 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 ZNF645Q8N7E2 425 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 GPX8Q8TED1 209 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 MMP27Q9H306 513 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 A3GALT2U3KPV4 340 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 KIAA2026Q5HYC2 2103 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 COL6A5A8TX70 2615 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 IGKV1D-8A0A087WSZ0 117 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 NBR2O15453 112 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 SOX6P35712 828 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 TGFBR1P36897 503 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 MRPS10P82664 201 aaKnown RBP7.49□□□□□ -1.21
CLK4-209ENST00000521621 C19orf54Q5BKX5 351 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 ZNF660Q6AZW8 331 aaPredicted RBP7.49□□□□□ -1.21
CLK4-209ENST00000521621 TCTEX1D1Q8N7M0 179 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 SAMD12Q8N8I0 201 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 OR5AP2Q8NGF4 316 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 UBALD1Q8TB05 177 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 ZFP57Q9NU63 452 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 NECAP2Q9NVZ3 263 aa7.49□□□□□ -1.21
CLK4-209ENST00000521621 AP4M1O00189 453 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 CTDSPLO15194 276 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 IGHV3-7P01780 117 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 OPN1MWP04001 364 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 OPN1MW2P0DN77 364 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 OPN1MW3P0DN78 364 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 ACTBP60709 375 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 TMEM69Q5SWH9 247 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 ZNF66Q6ZN08 573 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 FOXRED2Q8IWF2 684 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 BEST4Q8NFU0 473 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 DYNC2LI1Q8TCX1 351 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 TSNAXQ99598 290 aaKnown RBP7.48□□□□□ -1.21
CLK4-209ENST00000521621 RASL11BQ9BPW5 248 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 FAM212BQ9NTI7 297 aaPredicted RBP7.48□□□□□ -1.21
CLK4-209ENST00000521621 SDHAF2Q9NX18 166 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 SMIM30A4D0T7 59 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 FBXO24O75426 580 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 APOA2P02652 100 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 CRYGBP07316 175 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 TBPP20226 339 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 OR3A3P47888 321 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 LUMP51884 338 aaPredicted RBP7.48□□□□□ -1.21
CLK4-209ENST00000521621 TAS2R46P59540 309 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 C5orf64Q2M2E5 130 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 ACTBL2Q562R1 376 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 C5orf24Q7Z6I8 188 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 MYOZ3Q8TDC0 251 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 NUDCD2Q8WVJ2 157 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 TMEM68Q96MH6 324 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 GINS4Q9BRT9 223 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 PARP12Q9H0J9 701 aaKnown RBP7.48□□□□□ -1.21
CLK4-209ENST00000521621 ZNF230Q9UIE0 474 aaPredicted RBP7.48□□□□□ -1.21
CLK4-209ENST00000521621 SCOCQ9UIL1 159 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 SMIM31A0A1B0GVY4 71 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 ADARB2-AS1A8MUL3 147 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 HAX1O00165 279 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 EIF4EP06730 217 aaKnown RBP7.48□□□□□ -1.21
CLK4-209ENST00000521621 OR5H8P0DN80 308 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 PRSS3P35030 304 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 RCVRNP35243 200 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 KIR2DS2P43631 304 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 HES1Q14469 280 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 CDK10Q15131 360 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 ABCA11PQ4W5N1 156 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 SLC35E3Q7Z769 313 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 ZNF383Q8NA42 475 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 ABHD14BQ96IU4 210 aa7.48□□□□□ -1.21
CLK4-209ENST00000521621 HSD17B10Q99714 261 aaKnown RBP7.48□□□□□ -1.21
CLK4-209ENST00000521621 NAA50Q9GZZ1 169 aaKnown RBP7.48□□□□□ -1.21
CLK4-209ENST00000521621 ELF5Q9UKW6 265 aaPredicted RBP7.48□□□□□ -1.21
CLK4-209ENST00000521621 RRHO14718 337 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 RBFOX2O43251 390 aaKnown RBP eCLIP7.47□□□□□ -1.21
CLK4-209ENST00000521621 IGLV2-14P01704 120 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 ELANEP08246 267 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 DUTP33316 252 aaKnown RBP7.47□□□□□ -1.21
CLK4-209ENST00000521621 REG1BP48304 166 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 ARPC4P59998 168 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 LSM3P62310 102 aaKnown RBP7.47□□□□□ -1.21
CLK4-209ENST00000521621 SLC35B1P78383 322 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 FOXE3Q13461 319 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 RPL39P5Q59GN2 51 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 Q6ZS46 218 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 OSR1Q8TAX0 266 aaPredicted RBP7.47□□□□□ -1.21
CLK4-209ENST00000521621 SNAPC3Q92966 411 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 RBMX2Q9Y388 322 aaKnown RBP7.47□□□□□ -1.21
CLK4-209ENST00000521621 ELK1P19419 428 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 CD24P25063 80 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 DYRK1AQ13627 763 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 VAX1Q5SQQ9 334 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 STPG2Q8N412 459 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 OR4X2Q8NGF9 303 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms