RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 VKORC1L1Q8N0U8 176 aa8.56□□□□□ -1.04
MCF2-209ENST00000520602 OR4F5Q8NH21 305 aa8.56□□□□□ -1.04
MCF2-209ENST00000520602 OR4F4Q96R69 305 aa8.56□□□□□ -1.04
MCF2-209ENST00000520602 ARV1Q9H2C2 271 aa8.56□□□□□ -1.04
MCF2-209ENST00000520602 MLNRO43193 412 aa8.56□□□□□ -1.04
MCF2-209ENST00000520602 FGF16O43320 207 aa8.56□□□□□ -1.04
MCF2-209ENST00000520602 S100PP25815 95 aa8.56□□□□□ -1.04
MCF2-209ENST00000520602 TAS2R30P59541 319 aa8.56□□□□□ -1.04
MCF2-209ENST00000520602 PLGLAQ15195 96 aa8.56□□□□□ -1.04
MCF2-209ENST00000520602 TRAT1Q6PIZ9 186 aa8.56□□□□□ -1.04
MCF2-209ENST00000520602 ETV3LQ6ZN32 361 aa8.56□□□□□ -1.04
MCF2-209ENST00000520602 PIP4P1Q86T03 277 aa8.56□□□□□ -1.04
MCF2-209ENST00000520602 EIF4E3Q8N5X7 224 aaKnown RBP8.56□□□□□ -1.04
MCF2-209ENST00000520602 LRTM2Q8N967 370 aa8.56□□□□□ -1.04
MCF2-209ENST00000520602 HSD17B10Q99714 261 aaKnown RBP8.56□□□□□ -1.04
MCF2-209ENST00000520602 SAP30LQ9HAJ7 183 aa8.56□□□□□ -1.04
MCF2-209ENST00000520602 PLEKHA3Q9HB20 300 aa8.56□□□□□ -1.04
MCF2-209ENST00000520602 NDRG3Q9UGV2 375 aa8.56□□□□□ -1.04
MCF2-209ENST00000520602 METRNQ9UJH8 293 aa8.56□□□□□ -1.04
MCF2-209ENST00000520602 BTBD17A6NE02 478 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 GLRXP35754 106 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 SLC35E4Q6ICL7 350 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 WDR86Q86TI4 376 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 WDR31Q8NA23 367 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 ZBTB34Q8NCN2 500 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 GTF3AQ92664 365 aaKnown RBP8.55□□□□□ -1.04
MCF2-209ENST00000520602 RND1Q92730 232 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 RAB39BQ96DA2 213 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 OR4C12Q96R67 309 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 PLSCR4Q9NRQ2 329 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 C17orf98A8MV24 154 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 SLC25A6P12236 298 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 FLI1Q01543 452 aaPredicted RBP8.55□□□□□ -1.04
MCF2-209ENST00000520602 FAM53AQ6NSI3 398 aaPredicted RBP8.55□□□□□ -1.04
MCF2-209ENST00000520602 Q6P435 159 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 GLRX5Q86SX6 157 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 OR4D5Q8NGN0 318 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 SMIM8Q96KF7 97 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 ACTR3CQ9C0K3 210 aaPredicted RBP8.55□□□□□ -1.04
MCF2-209ENST00000520602 RBKSQ9H477 322 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 ABCA1O95477 2261 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 APOA2P02652 100 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 KITLGP21583 273 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 SMUG1Q53HV7 270 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 IL22RA2Q969J5 263 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 SMIM7Q9BQ49 75 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 AUP1Q9Y679 476 aa8.55□□□□□ -1.04
MCF2-209ENST00000520602 COL6A3P12111 3177 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 NDUFB3O43676 98 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 ZG16O60844 167 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 RAMP3O60896 148 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 FBP1P09467 338 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 FAM87AP0C7U9 286 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 LINC00205P59089 165 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 RTL8BQ17RB0 113 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 Q6ZSR3 168 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 ABHD5Q8WTS1 349 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 MEGF10Q96KG7 1140 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 SNX22Q96L94 193 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 GINS3Q9BRX5 216 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 A0A1W2PPH5 198 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 FAM157CP0CG43 387 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 RPL39P5Q59GN2 51 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 NECAP1Q8NC96 275 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 OR10G4Q8NGN3 311 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 OR10G9Q8NGN4 311 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 OR10G7Q8NGN6 311 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 SCNM1Q9BWG6 230 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 ZNF665Q9H7R5 613 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 TUBG2Q9NRH3 451 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 USF3Q68DE3 2245 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 A0A1W2PPE2 198 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 hADV38S2A0JD32 116 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 CDK2AP1O14519 115 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 OR4A8P0C604 315 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 SPP1P10451 314 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 SELLP14151 372 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 REG1BP48304 166 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 ID3Q02535 119 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 TNFRSF9Q07011 255 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 ZNF146Q15072 292 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 PCSK4Q6UW60 755 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 USB1Q9BQ65 265 aaKnown RBP8.54□□□□□ -1.04
MCF2-209ENST00000520602 SFXN3Q9BWM7 321 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 COMMD5Q9GZQ3 224 aa8.54□□□□□ -1.04
MCF2-209ENST00000520602 MED12LQ86YW9 2145 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 A0A0G2JRQ6 117 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 CRYBA1P05813 215 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 MMP9P14780 707 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 RAB7AP51149 207 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 KRTAP27-1Q3LI81 207 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 TMEM147Q9BVK8 224 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 CALYQ9NYX4 217 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 hCG_1809904A0A1W2PP81 198 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 A0A1W2PR64 198 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 A0A1W2PRV1 198 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 MARCH11A6NNE9 402 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 MT-CO2P00403 227 aa8.53□□□□□ -1.04
MCF2-209ENST00000520602 ACOT6Q3I5F7 207 aaPredicted RBP8.53□□□□□ -1.04
MCF2-209ENST00000520602 BTNL8Q6UX41 500 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms