RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 LPAR5Q9H1C0 372 aa11.73□□□□□ -0.53
CSMD1-207ENST00000520451 GHITMQ9H3K2 345 aa11.73□□□□□ -0.53
CSMD1-207ENST00000520451 PLGRKTQ9HBL7 147 aa11.73□□□□□ -0.53
CSMD1-207ENST00000520451 RNF150Q9ULK6 438 aa11.73□□□□□ -0.53
CSMD1-207ENST00000520451 GAB2Q9UQC2 676 aa11.73□□□□□ -0.53
CSMD1-207ENST00000520451 NUBP2Q9Y5Y2 271 aa11.73□□□□□ -0.53
CSMD1-207ENST00000520451 IGHV4OR15-8A0A075B7B6 117 aa11.72□□□□□ -0.53
CSMD1-207ENST00000520451 A0A087WW49 117 aa11.72□□□□□ -0.53
CSMD1-207ENST00000520451 IGHV3-11P01762 117 aa11.72□□□□□ -0.53
CSMD1-207ENST00000520451 CD37P11049 281 aa11.72□□□□□ -0.53
CSMD1-207ENST00000520451 ARSBP15848 533 aa11.72□□□□□ -0.53
CSMD1-207ENST00000520451 SPNP16150 400 aa11.72□□□□□ -0.53
CSMD1-207ENST00000520451 ZBTB25P24278 435 aa11.72□□□□□ -0.53
CSMD1-207ENST00000520451 ACTBL2Q562R1 376 aa11.72□□□□□ -0.53
CSMD1-207ENST00000520451 PYHIN1Q6K0P9 492 aa11.72□□□□□ -0.53
CSMD1-207ENST00000520451 CD200R1LQ6Q8B3 271 aa11.72□□□□□ -0.53
CSMD1-207ENST00000520451 UNQ5815/PRO19632Q6UWF5 114 aa11.72□□□□□ -0.53
CSMD1-207ENST00000520451 DRAXINQ8NBI3 349 aaPredicted RBP11.72□□□□□ -0.53
CSMD1-207ENST00000520451 ARPC1AQ92747 370 aa11.72□□□□□ -0.53
CSMD1-207ENST00000520451 TMEM203Q969S6 136 aa11.72□□□□□ -0.53
CSMD1-207ENST00000520451 SCN3BQ9NY72 215 aa11.72□□□□□ -0.53
CSMD1-207ENST00000520451 METTL1Q9UBP6 276 aaKnown RBP11.72□□□□□ -0.53
CSMD1-207ENST00000520451 MGAT4AQ9UM21 535 aa11.72□□□□□ -0.53
CSMD1-207ENST00000520451 SORL1Q92673 2214 aa11.72□□□□□ -0.53
CSMD1-207ENST00000520451 SLC17A2O00624 439 aa11.71□□□□□ -0.53
CSMD1-207ENST00000520451 CA2P00918 260 aa11.71□□□□□ -0.53
CSMD1-207ENST00000520451 SCTP09683 121 aa11.71□□□□□ -0.53
CSMD1-207ENST00000520451 SNRPBP14678 240 aaKnown RBP11.71□□□□□ -0.53
CSMD1-207ENST00000520451 CPEP16870 476 aa11.71□□□□□ -0.53
CSMD1-207ENST00000520451 TPPP2P59282 170 aa11.71□□□□□ -0.53
CSMD1-207ENST00000520451 PSG5Q15238 335 aa11.71□□□□□ -0.53
CSMD1-207ENST00000520451 RAB11BQ15907 218 aa11.71□□□□□ -0.53
CSMD1-207ENST00000520451 LFNGQ8NES3 379 aa11.71□□□□□ -0.53
CSMD1-207ENST00000520451 MS4A10Q96PG2 267 aa11.71□□□□□ -0.53
CSMD1-207ENST00000520451 GFI1Q99684 422 aa11.71□□□□□ -0.53
CSMD1-207ENST00000520451 RNF5Q99942 180 aa11.71□□□□□ -0.53
CSMD1-207ENST00000520451 Q9N2K0 584 aa11.71□□□□□ -0.53
CSMD1-207ENST00000520451 C12orf4Q9NQ89 552 aa11.71□□□□□ -0.53
CSMD1-207ENST00000520451 TPSG1Q9NRR2 321 aa11.71□□□□□ -0.53
CSMD1-207ENST00000520451 HUWE1Q7Z6Z7 4374 aaKnown RBP11.7□□□□□ -0.54
CSMD1-207ENST00000520451 C3orf84H3BNL1 204 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 IGKV1-16P04430 117 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 OR8U9P0C7N5 309 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 HSMCR30P0CW71 290 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 CD40LGP29965 261 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 VEGFCP49767 419 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 RPS16P62249 146 aaKnown RBP11.7□□□□□ -0.54
CSMD1-207ENST00000520451 PITPNAQ00169 270 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 IRF3Q14653 427 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 AKIRIN2Q53H80 203 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 ACSM6Q6P461 480 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 ZNF562Q6V9R5 426 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 SBSPONQ8IVN8 264 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 FAM89BQ8N5H3 189 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 ZNF383Q8NA42 475 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 OR6Q1Q8NGQ2 317 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 PTX4Q96A99 478 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 ARHGAP5-AS1Q96IT6 56 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 TSNAXQ99598 290 aaKnown RBP11.7□□□□□ -0.54
CSMD1-207ENST00000520451 ZNF221Q9UK13 617 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 HSF4Q9ULV5 492 aa11.7□□□□□ -0.54
CSMD1-207ENST00000520451 AK6Q9Y3D8 172 aaKnown RBP11.7□□□□□ -0.54
CSMD1-207ENST00000520451 FOXI3A8MTJ6 420 aaPredicted RBP11.69□□□□□ -0.54
CSMD1-207ENST00000520451 PROP1O75360 226 aa11.69□□□□□ -0.54
CSMD1-207ENST00000520451 SPDEFO95238 335 aa11.69□□□□□ -0.54
CSMD1-207ENST00000520451 APOA2P02652 100 aa11.69□□□□□ -0.54
CSMD1-207ENST00000520451 HSPB1P04792 205 aaKnown RBP11.69□□□□□ -0.54
CSMD1-207ENST00000520451 GP9P14770 177 aa11.69□□□□□ -0.54
CSMD1-207ENST00000520451 LINC00205P59089 165 aa11.69□□□□□ -0.54
CSMD1-207ENST00000520451 RPS25P62851 125 aaKnown RBP11.69□□□□□ -0.54
CSMD1-207ENST00000520451 TMEM91Q6ZNR0 172 aa11.69□□□□□ -0.54
CSMD1-207ENST00000520451 OVCH2Q7RTZ1 564 aa11.69□□□□□ -0.54
CSMD1-207ENST00000520451 GRPEL2Q8TAA5 225 aa11.69□□□□□ -0.54
CSMD1-207ENST00000520451 FLYWCH2Q96CP2 140 aaKnown RBP11.69□□□□□ -0.54
CSMD1-207ENST00000520451 RCHY1Q96PM5 261 aa11.69□□□□□ -0.54
CSMD1-207ENST00000520451 CMSS1Q9BQ75 279 aaKnown RBP11.69□□□□□ -0.54
CSMD1-207ENST00000520451 PECRQ9BY49 303 aa11.69□□□□□ -0.54
CSMD1-207ENST00000520451 IGKV1-6A0A0C4DH72 117 aa11.68□□□□□ -0.54
CSMD1-207ENST00000520451 ARL6IP5O75915 188 aa11.68□□□□□ -0.54
CSMD1-207ENST00000520451 TRGV3P03979 118 aa11.68□□□□□ -0.54
CSMD1-207ENST00000520451 TFAP2AP05549 437 aa11.68□□□□□ -0.54
CSMD1-207ENST00000520451 FRMD6-AS1P0C7T7 363 aa11.68□□□□□ -0.54
CSMD1-207ENST00000520451 TMEM50BP56557 158 aa11.68□□□□□ -0.54
CSMD1-207ENST00000520451 CLDN12P56749 244 aa11.68□□□□□ -0.54
CSMD1-207ENST00000520451 TPBGQ13641 420 aa11.68□□□□□ -0.54
CSMD1-207ENST00000520451 PDPNQ86YL7 162 aa11.68□□□□□ -0.54
CSMD1-207ENST00000520451 RHOVQ96L33 236 aa11.68□□□□□ -0.54
CSMD1-207ENST00000520451 OR4C12Q96R67 309 aa11.68□□□□□ -0.54
CSMD1-207ENST00000520451 SLA2Q9H6Q3 261 aa11.68□□□□□ -0.54
CSMD1-207ENST00000520451 ZNF355PQ9NSJ1 428 aa11.68□□□□□ -0.54
CSMD1-207ENST00000520451 RDH8Q9NYR8 311 aa11.68□□□□□ -0.54
CSMD1-207ENST00000520451 TPRKBQ9Y3C4 175 aa11.68□□□□□ -0.54
CSMD1-207ENST00000520451 DNAH7Q8WXX0 4024 aa11.68□□□□□ -0.54
CSMD1-207ENST00000520451 TRIM64CA6NLI5 447 aa11.67□□□□□ -0.54
CSMD1-207ENST00000520451 TRDCB7Z8K6 153 aa11.67□□□□□ -0.54
CSMD1-207ENST00000520451 M0R1X1 148 aa11.67□□□□□ -0.54
CSMD1-207ENST00000520451 SLC25A17O43808 307 aa11.67□□□□□ -0.54
CSMD1-207ENST00000520451 CALRP27797 417 aaKnown RBP11.67□□□□□ -0.54
CSMD1-207ENST00000520451 FXYD3Q14802 87 aa11.67□□□□□ -0.54
CSMD1-207ENST00000520451 TRAM1Q15629 374 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms