RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 TGP01266 2768 aa7.64□□□□□ -1.19
RNF4-221ENST00000513643 IGHV7-81A0A0B4J1V7 117 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 PSMB11A5LHX3 300 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 TMEM235A6NFC5 223 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 NCBP2LA6PVI3 153 aaKnown RBP7.63□□□□□ -1.19
RNF4-221ENST00000513643 AP4M1O00189 453 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 HSPA12AO43301 675 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 RBBP9O75884 186 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 TUSC2O75896 110 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 IGLV2-14P01704 120 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 TFAP2AP05549 437 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 CTXN2P0C2S0 81 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 CNTFRP26992 372 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 PPIFP30405 207 aaKnown RBP7.63□□□□□ -1.19
RNF4-221ENST00000513643 CRIP2P52943 208 aaPredicted RBP7.63□□□□□ -1.19
RNF4-221ENST00000513643 ARFRP1Q13795 201 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 C5orf64Q2M2E5 130 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 KPRPQ5T749 579 aaPredicted RBP7.63□□□□□ -1.19
RNF4-221ENST00000513643 SLC35E3Q7Z769 313 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 ANKRD13BQ86YJ7 626 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 COMMD1Q8N668 190 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 OR10J5Q8NHC4 309 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 FAM110DQ8TAY7 271 aaPredicted RBP7.63□□□□□ -1.19
RNF4-221ENST00000513643 MYOZ3Q8TDC0 251 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 NUDCD2Q8WVJ2 157 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 MAFIPQ8WZ33 124 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 DDB2Q92466 427 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 PHF21AQ96BD5 680 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 KCTD12Q96CX2 325 aaKnown RBP7.63□□□□□ -1.19
RNF4-221ENST00000513643 AUNIPQ9H7T9 357 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 SDHAF2Q9NX18 166 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 RNF150Q9ULK6 438 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 ANAPC10Q9UM13 185 aa7.63□□□□□ -1.19
RNF4-221ENST00000513643 TSSC4Q9Y5U2 329 aaPredicted RBP7.63□□□□□ -1.19
RNF4-221ENST00000513643 A0A075B6Q4 140 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 BET1O15155 118 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 NBR2O15453 112 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 KCNAB3O43448 404 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 XRCC3O43542 346 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 PEX14O75381 377 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 GABARAPO95166 117 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 HLA-DQB1P01920 261 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 IGKV1-16P04430 117 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 CRYGBP07316 175 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 OR8U9P0C7N5 309 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 EGR2P11161 476 aaPredicted RBP7.62□□□□□ -1.19
RNF4-221ENST00000513643 SOX6P35712 828 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 TALDO1P37837 337 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 NCS1P62166 190 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 LSM3P62310 102 aaKnown RBP7.62□□□□□ -1.19
RNF4-221ENST00000513643 MRPS15P82914 257 aaKnown RBP7.62□□□□□ -1.19
RNF4-221ENST00000513643 EIF4EBP1Q13541 118 aaPredicted RBP7.62□□□□□ -1.19
RNF4-221ENST00000513643 KIAA0141Q14154 515 aaPredicted RBP7.62□□□□□ -1.19
RNF4-221ENST00000513643 MMDQ15546 238 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 C9orf152Q5JTZ5 239 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 CNIH2Q6PI25 160 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 FAM131AQ6UXB0 335 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 GLDNQ6ZMI3 551 aaPredicted RBP7.62□□□□□ -1.19
RNF4-221ENST00000513643 ZNF329Q86UD4 541 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 HOGA1Q86XE5 327 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 MINDY2Q8NBR6 621 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 OR8U1Q8NH10 309 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 CMTM3Q96MX0 182 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 RASL11BQ9BPW5 248 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 ST6GALNAC5Q9BVH7 336 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 ZFP57Q9NU63 452 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 ANXA10Q9UJ72 324 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 LINC00527Q9UJ94 153 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 WASHC3Q9Y3C0 194 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 TNCP24821 2201 aa7.62□□□□□ -1.19
RNF4-221ENST00000513643 TRAV18A0A075B6X5 111 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 TCRBV4S1A1TA0A5B7 111 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 RRHO14718 337 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 IGLV1-40P01703 118 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 IGLV2-23P01705 113 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 IGHG4P01861 327 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 PSMB8P28062 276 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 VBP1P61758 197 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 SSBP2P81877 361 aaPredicted RBP7.61□□□□□ -1.19
RNF4-221ENST00000513643 NDPQ00604 133 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 MRGPRG-AS1Q2M3A8 158 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 ARSJQ5FYB0 599 aaPredicted RBP7.61□□□□□ -1.19
RNF4-221ENST00000513643 SAMD5Q5TGI4 173 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 LIN54Q6MZP7 749 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 PDPNQ86YL7 162 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 FOXRED2Q8IWF2 684 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 DRAXINQ8NBI3 349 aaPredicted RBP7.61□□□□□ -1.19
RNF4-221ENST00000513643 OR4F17Q8NGA8 305 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 OR4X2Q8NGF9 303 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 OR4F4Q96R69 305 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 NAA50Q9GZZ1 169 aaKnown RBP7.61□□□□□ -1.19
RNF4-221ENST00000513643 OR51J1Q9H342 316 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 ZNF221Q9UK13 617 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 OR2W1Q9Y3N9 320 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 NUBP2Q9Y5Y2 271 aa7.61□□□□□ -1.19
RNF4-221ENST00000513643 IGKV1D-13A0A0B4J2D9 117 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 SRRM4A7MD48 611 aaKnown RBP7.6□□□□□ -1.19
RNF4-221ENST00000513643 FCN1O00602 326 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 SPDEFO95238 335 aa7.6□□□□□ -1.19
RNF4-221ENST00000513643 ELANEP08246 267 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms