RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 EREGO14944 169 aa6.56□□□□□ -1.36
CLCN3-208ENST00000512813 SNX3O60493 162 aa6.56□□□□□ -1.36
CLCN3-208ENST00000512813 MT-ND4P03905 459 aa6.56□□□□□ -1.36
CLCN3-208ENST00000512813 HTD2P86397 168 aa6.56□□□□□ -1.36
CLCN3-208ENST00000512813 LIPEQ05469 1076 aa6.56□□□□□ -1.36
CLCN3-208ENST00000512813 KIR3DS1Q14943 382 aa6.56□□□□□ -1.36
CLCN3-208ENST00000512813 PIGYQ3MUY2 71 aa6.56□□□□□ -1.36
CLCN3-208ENST00000512813 SLC35D3Q5M8T2 416 aa6.56□□□□□ -1.36
CLCN3-208ENST00000512813 C6orf183Q5T699 404 aa6.56□□□□□ -1.36
CLCN3-208ENST00000512813 CLEC19AQ6UXS0 136 aa6.56□□□□□ -1.36
CLCN3-208ENST00000512813 PLEKHG7Q6ZR37 379 aa6.56□□□□□ -1.36
CLCN3-208ENST00000512813 BBS1Q8NFJ9 593 aa6.56□□□□□ -1.36
CLCN3-208ENST00000512813 PHB2Q99623 299 aa6.56□□□□□ -1.36
CLCN3-208ENST00000512813 BTBD10Q9BSF8 475 aa6.56□□□□□ -1.36
CLCN3-208ENST00000512813 IFI27L2Q9H2X8 130 aa6.56□□□□□ -1.36
CLCN3-208ENST00000512813 ZNF581Q9P0T4 197 aa6.56□□□□□ -1.36
CLCN3-208ENST00000512813 TMEM14AQ9Y6G1 99 aa6.56□□□□□ -1.36
CLCN3-208ENST00000512813 OR2J3O76001 311 aa6.55□□□□□ -1.36
CLCN3-208ENST00000512813 SOX14O95416 240 aa6.55□□□□□ -1.36
CLCN3-208ENST00000512813 MT-ND2P03891 347 aa6.55□□□□□ -1.36
CLCN3-208ENST00000512813 IGKV1-16P04430 117 aa6.55□□□□□ -1.36
CLCN3-208ENST00000512813 CTSDP07339 412 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-208ENST00000512813 P0C879 139 aa6.55□□□□□ -1.36
CLCN3-208ENST00000512813 PPP1CCP36873 323 aaKnown RBP6.55□□□□□ -1.36
CLCN3-208ENST00000512813 MAGEA2P43356 314 aa6.55□□□□□ -1.36
CLCN3-208ENST00000512813 COQ5Q5HYK3 327 aa6.55□□□□□ -1.36
CLCN3-208ENST00000512813 LY6G6FQ5SQ64 297 aa6.55□□□□□ -1.36
CLCN3-208ENST00000512813 LELP1Q5T871 98 aa6.55□□□□□ -1.36
CLCN3-208ENST00000512813 ZNF529Q6P280 563 aa6.55□□□□□ -1.36
CLCN3-208ENST00000512813 Q6ZRN7 208 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-208ENST00000512813 ANKRD42Q8N9B4 389 aa6.55□□□□□ -1.36
CLCN3-208ENST00000512813 OR9Q2Q8NGE9 314 aa6.55□□□□□ -1.36
CLCN3-208ENST00000512813 OR52L2PQ8NGH6 319 aa6.55□□□□□ -1.36
CLCN3-208ENST00000512813 APOL4Q9BPW4 351 aa6.55□□□□□ -1.36
CLCN3-208ENST00000512813 Q9H3A6 140 aa6.55□□□□□ -1.36
CLCN3-208ENST00000512813 JPT1Q9UK76 154 aa6.55□□□□□ -1.36
CLCN3-208ENST00000512813 LOC107986453A0A1B0GWG9 222 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 A0A1W2PPQ1 181 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 YPEL1O60688 119 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 CRYGBP07316 175 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 OCM2P0CE71 109 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 OCMP0CE72 109 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-208ENST00000512813 SPART-AS1P0CW21 52 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 TMEM225BP0DP42 221 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 CPEP16870 476 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 SLC2A5P22732 501 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 GCSHP23434 173 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 ERVFC1-1P60608 527 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 RPL39P5Q59GN2 51 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 TRAT1Q6PIZ9 186 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 ZNF322Q6U7Q0 402 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-208ENST00000512813 LINC00528Q8N1L1 170 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 FAM162AQ96A26 154 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 YPEL2Q96QA6 119 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 TMEM109Q9BVC6 243 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 TMEM14BQ9NUH8 114 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 PIPOXQ9P0Z9 390 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 TNXBP22105 4242 aa6.54□□□□□ -1.36
CLCN3-208ENST00000512813 MRASO14807 208 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 ARPC2O15144 300 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 GSTA4O15217 222 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 MPPED1O15442 326 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 MAGEB4O15481 346 aaPredicted RBP6.53□□□□□ -1.36
CLCN3-208ENST00000512813 RGS16O15492 202 aaPredicted RBP6.53□□□□□ -1.36
CLCN3-208ENST00000512813 IGLV2-23P01705 113 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 IGHV3-23P01764 117 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 MRPL3P09001 348 aaKnown RBP6.53□□□□□ -1.36
CLCN3-208ENST00000512813 C4BPBP20851 252 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 PSMB6P28072 239 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 RRM2P31350 389 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 ACTR3P61158 418 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 RPS7P62081 194 aaKnown RBP6.53□□□□□ -1.36
CLCN3-208ENST00000512813 ZSCAN26Q16670 478 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 SYT6Q5T7P8 510 aaPredicted RBP6.53□□□□□ -1.36
CLCN3-208ENST00000512813 IQCF1Q8N6M8 205 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 CSNK1G2-AS1Q8NCQ2 148 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 PXT1Q8NFP0 134 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 OR2AK2Q8NG84 335 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 C7orf26Q96N11 449 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 ADI1Q9BV57 179 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 FNDC4Q9H6D8 234 aaPredicted RBP6.53□□□□□ -1.36
CLCN3-208ENST00000512813 TRAPPC2LQ9UL33 140 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 LINC00588Q9Y4M8 146 aa6.53□□□□□ -1.36
CLCN3-208ENST00000512813 RAB29O14966 203 aa6.52□□□□□ -1.37
CLCN3-208ENST00000512813 CCDC22O60826 627 aa6.52□□□□□ -1.37
CLCN3-208ENST00000512813 OR7C1O76099 320 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-208ENST00000512813 GASTP01350 101 aa6.52□□□□□ -1.37
CLCN3-208ENST00000512813 GSTT2P0CG29 244 aa6.52□□□□□ -1.37
CLCN3-208ENST00000512813 GSTT2BP0CG30 244 aa6.52□□□□□ -1.37
CLCN3-208ENST00000512813 SPP1P10451 314 aa6.52□□□□□ -1.37
CLCN3-208ENST00000512813 HTN3P15516 51 aa6.52□□□□□ -1.37
CLCN3-208ENST00000512813 CCL18P55774 89 aa6.52□□□□□ -1.37
CLCN3-208ENST00000512813 CXCR4P61073 352 aa6.52□□□□□ -1.37
CLCN3-208ENST00000512813 PTGES3Q15185 160 aaKnown RBP6.52□□□□□ -1.37
CLCN3-208ENST00000512813 DMKNQ6E0U4 476 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-208ENST00000512813 PDPNQ86YL7 162 aa6.52□□□□□ -1.37
CLCN3-208ENST00000512813 STX19Q8N4C7 294 aa6.52□□□□□ -1.37
CLCN3-208ENST00000512813 OR13C9Q8NGT0 318 aa6.52□□□□□ -1.37
CLCN3-208ENST00000512813 NEK7Q8TDX7 302 aa6.52□□□□□ -1.37
CLCN3-208ENST00000512813 SRSF12Q8WXF0 261 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms