RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 CCL28Q9NRJ3 127 aa4.72□□□□□ -1.65
CHD1-208ENST00000512392 SPANXCQ9NY87 97 aa4.72□□□□□ -1.65
CHD1-208ENST00000512392 POLR2AP24928 1970 aaKnown RBP4.72□□□□□ -1.65
CHD1-208ENST00000512392 MED23Q9ULK4 1368 aa4.72□□□□□ -1.65
CHD1-208ENST00000512392 ZNF609O15014 1411 aa4.71□□□□□ -1.65
CHD1-208ENST00000512392 TRAV9-2A0A087WT02 112 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 CCL15-CCL14A0A0B4J2E2 113 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 LOC100130705A0A1B0GUX0 176 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 PRAC2D3DTV9 90 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 H7BYZ3 331 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 M0R2Z0 102 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 CORTO00230 105 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 ZNF780AO75290 641 aaPredicted RBP4.71□□□□□ -1.66
CHD1-208ENST00000512392 IGHV3-43DP0DP04 118 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 HSPA9P38646 679 aaKnown RBP4.71□□□□□ -1.66
CHD1-208ENST00000512392 MP68P56378 58 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 NCS1P62166 190 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 ENDOGQ14249 297 aaKnown RBP4.71□□□□□ -1.66
CHD1-208ENST00000512392 MMDQ15546 238 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 GUCA2BQ16661 112 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 CCL15Q16663 113 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 PRSS54Q6PEW0 395 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 C12orf45Q8N5I9 185 aaPredicted RBP4.71□□□□□ -1.66
CHD1-208ENST00000512392 OR2G3Q8NGZ4 309 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 OR52P1PQ8NH57 321 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 SFT2D1Q8WV19 159 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 ZC2HC1AQ96GY0 325 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 HSD17B10Q99714 261 aaKnown RBP4.71□□□□□ -1.66
CHD1-208ENST00000512392 CST9LQ9H4G1 147 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 JPT2Q9H910 190 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 RPUSD1Q9UJJ7 312 aaKnown RBP4.71□□□□□ -1.66
CHD1-208ENST00000512392 HS3ST2Q9Y278 367 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 COX11Q9Y6N1 276 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 NALCNQ8IZF0 1738 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 EIF4G3O43432 1585 aaKnown RBP4.71□□□□□ -1.66
CHD1-208ENST00000512392 TECPR2O15040 1411 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 K7EPK0 472 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 TRAF3IP2O43734 574 aaPredicted RBP4.71□□□□□ -1.66
CHD1-208ENST00000512392 CECR9P0C854 216 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 SMIM17P0DL12 118 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 RPS25P62851 125 aaKnown RBP4.71□□□□□ -1.66
CHD1-208ENST00000512392 PPP3R1P63098 170 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 SELENOWP63302 87 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 PSG7Q13046 419 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 LRRC10Q5BKY1 277 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 SHISA6Q6ZSJ9 500 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 LINC01551Q86U37 167 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 MARCH3Q86UD3 253 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 OR8I2Q8N0Y5 310 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 DRAM1Q8N682 238 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 OR4E2Q8NGC2 313 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 OR5K1Q8NHB7 308 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 ZNF519Q8TB69 540 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 LMX1AQ8TE12 382 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 KCNS1Q96KK3 526 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 ERMAPQ96PL5 475 aaPredicted RBP4.71□□□□□ -1.66
CHD1-208ENST00000512392 LXNQ9BS40 222 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 PARLQ9H300 379 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 AIG1Q9NVV5 245 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 MRPL16Q9NX20 251 aaKnown RBP4.71□□□□□ -1.66
CHD1-208ENST00000512392 ZFP30Q9Y2G7 519 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 NEUROG3Q9Y4Z2 214 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 HES2Q9Y543 173 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 ZNF706Q9Y5V0 76 aaPredicted RBP4.71□□□□□ -1.66
CHD1-208ENST00000512392 RTL1A6NKG5 1358 aa4.71□□□□□ -1.66
CHD1-208ENST00000512392 PHLPP1O60346 1717 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 SSH2Q76I76 1423 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 OR4C45A6NMZ5 311 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 M0R1X1 148 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 GYPCP04921 128 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 EVI2AP22794 236 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 PKIAP61925 76 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 PSG9Q00887 426 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 SSX1Q16384 188 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 Q5XG85 94 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 C4orf33Q8N1A6 199 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 OR5A1Q8NGJ0 315 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 SLC25A40Q8TBP6 338 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 PBOV1Q9GZY1 135 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 MARCH5Q9NX47 278 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 TMEM216Q9P0N5 145 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 LINC00527Q9UJ94 153 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 C2orf16Q68DN1 1984 aa4.7□□□□□ -1.66
CHD1-208ENST00000512392 TRAV4A0A0B4J268 109 aa4.69□□□□□ -1.66
CHD1-208ENST00000512392 LOC107984640A0A0U1RRK4 108 aa4.69□□□□□ -1.66
CHD1-208ENST00000512392 OR2H2O95918 312 aa4.69□□□□□ -1.66
CHD1-208ENST00000512392 CDKN2AP42771 156 aaKnown RBP4.69□□□□□ -1.66
CHD1-208ENST00000512392 PSMB3P49720 205 aa4.69□□□□□ -1.66
CHD1-208ENST00000512392 TAF6P49848 677 aa4.69□□□□□ -1.66
CHD1-208ENST00000512392 ZNF140P52738 457 aaPredicted RBP4.69□□□□□ -1.66
CHD1-208ENST00000512392 GRB2P62993 217 aaKnown RBP4.69□□□□□ -1.66
CHD1-208ENST00000512392 CLLU1OSQ5K130 101 aa4.69□□□□□ -1.66
CHD1-208ENST00000512392 GLYATL3Q5SZD4 288 aa4.69□□□□□ -1.66
CHD1-208ENST00000512392 WDR59Q6PJI9 974 aa4.69□□□□□ -1.66
CHD1-208ENST00000512392 ZNF773Q6PK81 442 aa4.69□□□□□ -1.66
CHD1-208ENST00000512392 ZNF788Q6ZQV5 615 aa4.69□□□□□ -1.66
CHD1-208ENST00000512392 NFE4Q86UQ8 179 aa4.69□□□□□ -1.66
CHD1-208ENST00000512392 PDZD9Q8IXQ8 264 aa4.69□□□□□ -1.66
CHD1-208ENST00000512392 TMEM252Q8N6L7 170 aa4.69□□□□□ -1.66
CHD1-208ENST00000512392 MALSU1Q96EH3 234 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms