RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 KIAA2026Q5HYC2 2103 aa7.73□□□□□ -1.17
CPNE4-210ENST00000512332 IGHV2OR16-5A0A0B4J2B6 119 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 IGHV3-64DA0A0J9YX35 117 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 ODAMA1E959 279 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 OR5H1A6NKK0 313 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 PMS2P5A8MQ11 134 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 AP4M1O00189 453 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 CEACAM4O75871 244 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 TNFSF13O75888 250 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 WISP2O76076 250 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 CLDN1O95832 211 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 IFNA1P01562 189 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 MBP02144 154 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 FBP1P09467 338 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 FTH1P19P0C7X4 201 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 GZMHP20718 246 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 FABP6P51161 128 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 COL10A1Q03692 680 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 ELOBQ15370 118 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 VWC2Q2TAL6 325 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 AARDQ4LEZ3 155 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 RBMS3Q6XE24 437 aaKnown RBP7.72□□□□□ -1.17
CPNE4-210ENST00000512332 CXorf67Q86X51 503 aaPredicted RBP7.72□□□□□ -1.17
CPNE4-210ENST00000512332 MRGPRDQ8TDS7 321 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 CA5BP1Q8WTZ4 195 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 TMEM147Q9BVK8 224 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 VSIRQ9H7M9 311 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 DKK4Q9UBT3 224 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 IGHV1-18A0A0C4DH31 117 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 A0A1W2PPE3 182 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 FAM90A9PA6NNJ1 464 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 C17orf98A8MV24 154 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 C15orf65H3BRN8 121 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 SPINT2O43291 252 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 G6PCP35575 357 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 EIF2S3P41091 472 aaKnown RBP7.72□□□□□ -1.17
CPNE4-210ENST00000512332 GNB2P62879 340 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 FABP9Q0Z7S8 132 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 FOXF2Q12947 444 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 PRAMEF6Q5VXH4 476 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 LCN15Q6UWW0 184 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 TCTEX1D2Q8WW35 142 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 EDARADDQ8WWZ3 215 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 STARD4Q96DR4 205 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 ZNF665Q9H7R5 613 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 PROCRQ9UNN8 238 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 WASF3Q9UPY6 502 aa7.72□□□□□ -1.17
CPNE4-210ENST00000512332 USF3Q68DE3 2245 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 MAP1LC3B2A6NCE7 125 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 MBD3L4A6NDZ8 208 aaPredicted RBP7.71□□□□□ -1.17
CPNE4-210ENST00000512332 MBD3L3A6NE82 208 aaPredicted RBP7.71□□□□□ -1.17
CPNE4-210ENST00000512332 MBD3L5A6NJ08 208 aaPredicted RBP7.71□□□□□ -1.17
CPNE4-210ENST00000512332 PCP4L1A6NKN8 68 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 ZNF737O75373 536 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 S1PR2O95136 353 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 S100A9P06702 114 aaKnown RBP7.71□□□□□ -1.17
CPNE4-210ENST00000512332 MDKP21741 143 aaPredicted RBP7.71□□□□□ -1.17
CPNE4-210ENST00000512332 PRDX2P32119 198 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 OR2B8PP59922 312 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 RAB11AP62491 216 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 C3orf36Q3SXR2 165 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 BEND4Q6ZU67 534 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 H2BFWTQ7Z2G1 175 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 RPP25LQ8N5L8 163 aaKnown RBP7.71□□□□□ -1.17
CPNE4-210ENST00000512332 ZNF610Q8N9Z0 462 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 OR10P1Q8NGE3 313 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 OR13A1Q8NGR1 328 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 OR13D1Q8NGV5 346 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 MBD3L2Q8NHZ7 208 aaPredicted RBP7.71□□□□□ -1.17
CPNE4-210ENST00000512332 DTD1Q8TEA8 209 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 MAP1LC3BQ9GZQ8 125 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 NCOR1P1Q9H4R4 102 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 MSL2Q9HCI7 577 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 SLC39A9Q9NUM3 307 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 SLC25A15Q9Y619 301 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 GTF3C1Q12789 2109 aa7.71□□□□□ -1.17
CPNE4-210ENST00000512332 ZFP92A6NM28 416 aa7.71□□□□□ -1.18
CPNE4-210ENST00000512332 ZNF727A8MUV8 499 aa7.71□□□□□ -1.18
CPNE4-210ENST00000512332 SRRM5B3KS81 715 aa7.71□□□□□ -1.18
CPNE4-210ENST00000512332 GALR2O43603 387 aaPredicted RBP7.71□□□□□ -1.18
CPNE4-210ENST00000512332 SOX15O60248 233 aa7.71□□□□□ -1.18
CPNE4-210ENST00000512332 WT1P19544 449 aaPredicted RBP7.71□□□□□ -1.18
CPNE4-210ENST00000512332 RND2P52198 227 aa7.71□□□□□ -1.18
CPNE4-210ENST00000512332 CEBPGP53567 150 aa7.71□□□□□ -1.18
CPNE4-210ENST00000512332 ZNF816Q0VGE8 651 aaPredicted RBP7.71□□□□□ -1.18
CPNE4-210ENST00000512332 SRSF6Q13247 344 aaKnown RBP7.71□□□□□ -1.18
CPNE4-210ENST00000512332 BHLHA15Q7RTS1 189 aaPredicted RBP7.71□□□□□ -1.18
CPNE4-210ENST00000512332 SSX7Q7RTT5 188 aa7.71□□□□□ -1.18
CPNE4-210ENST00000512332 ZNF808Q8N4W9 903 aaPredicted RBP7.71□□□□□ -1.18
CPNE4-210ENST00000512332 CD177Q8N6Q3 437 aa7.71□□□□□ -1.18
CPNE4-210ENST00000512332 PPP1R35Q8TAP8 253 aa7.71□□□□□ -1.18
CPNE4-210ENST00000512332 LRRC29Q8WV35 223 aa7.71□□□□□ -1.18
CPNE4-210ENST00000512332 SDF2L1Q9HCN8 221 aa7.71□□□□□ -1.18
CPNE4-210ENST00000512332 UFSP2Q9NUQ7 469 aa7.71□□□□□ -1.18
CPNE4-210ENST00000512332 CACNA1DQ01668 2161 aa7.71□□□□□ -1.18
CPNE4-210ENST00000512332 URB1O60287 2271 aaKnown RBP7.7□□□□□ -1.18
CPNE4-210ENST00000512332 UBE2L5PA0A1B0GUS4 154 aa7.7□□□□□ -1.18
CPNE4-210ENST00000512332 LINC00473A8K010 186 aa7.7□□□□□ -1.18
CPNE4-210ENST00000512332 TMEM250H0YL14 139 aa7.7□□□□□ -1.18
CPNE4-210ENST00000512332 RBFOX2O43251 390 aaKnown RBP eCLIP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms