RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 MAGEA5P43359 124 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 BRWD1-AS2P59051 145 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 GUSBP1Q15486 140 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 CR1LQ2VPA4 569 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 ZNF600Q6ZNG1 722 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 MDP1Q86V88 176 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 BATF2Q8N1L9 274 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 CISD2Q8N5K1 135 aaKnown RBP7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 OR52E5Q8NH55 327 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 RNASE11Q8TAA1 199 aaKnown RBP7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 SMIM7Q9BQ49 75 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 METRNQ9UJH8 293 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 PPP1R3CQ9UQK1 317 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 URGCP-MRPS24S4R325 110 aa7.75□□□□□ -1.17
PDGFRA-208ENST00000509490 C9orf172C9J069 976 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 MPDU1O75352 247 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 GCGP01275 180 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 SP1P08047 785 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 COX5AP20674 150 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 MRPL49Q13405 166 aaKnown RBP7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 GFI1BQ5VTD9 330 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 C16orf82Q7Z2V1 217 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 P4HA3Q7Z4N8 544 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 BEND2Q8NDZ0 799 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 OR1P1Q8NH06 330 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 WDYHV1Q96HA8 205 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 C14orf144Q96I85 54 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 PACRGQ96M98 296 aaPredicted RBP7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 NOL4LQ96MY1 436 aaPredicted RBP7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 TMUB1Q9BVT8 246 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 DOCK10Q96BY6 2186 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 ODAMA1E959 279 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 HAND1O96004 215 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 SOX8P57073 446 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 HTD2P86397 168 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 DEFA6Q01524 100 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 TRIP6Q15654 476 aaKnown RBP7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 ACOT6Q3I5F7 207 aaPredicted RBP7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 DCAF10Q5QP82 559 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 TMEM144Q7Z5S9 345 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 C1orf174Q8IYL3 243 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 NCOR1P1Q9H4R4 102 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 GAB2Q9UQC2 676 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 C17orf112F2Z3M2 114 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 RBFOX2O43251 390 aaKnown RBP eCLIP7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 NXPH3O95157 252 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 IL2RGP31785 369 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 PPP1CBP62140 327 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 IZUMO4Q1ZYL8 232 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 SPANXN5Q5MJ07 72 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 INO80CQ6PI98 192 aaPredicted RBP7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 C11orf53Q8IXP5 236 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 GALMQ96C23 342 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 NEIL1Q96FI4 390 aaPredicted RBP7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 GMPPAQ96IJ6 420 aaPredicted RBP7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 HSD17B10Q99714 261 aaKnown RBP7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 NPCDR1Q9BY65 106 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 PARLQ9H300 379 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 ZDHHC11Q9H8X9 412 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 WDR83OSQ9Y284 106 aa7.74□□□□□ -1.17
PDGFRA-208ENST00000509490 TRAV9-1A0A075B6T8 112 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 UBE2L5PA0A1B0GUS4 154 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 PATE3B3GLJ2 98 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 C12orf77C9JDV5 145 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 KLRC4-KLRK1H3BQV0 150 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 PDE6DO43924 150 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 CEBPGP53567 150 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 FGF8P55075 233 aaPredicted RBP7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 C1orf162Q8NEQ5 155 aaPredicted RBP7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 OR10P1Q8NGE3 313 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 OR10G9Q8NGN4 311 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 OR10G7Q8NGN6 311 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 PTPRBP23467 1997 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 F6UZH7 168 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 H7BYZ3 331 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 SIRPB1O00241 398 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 ITGB1BP1O14713 200 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 AMBPP02760 352 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 KITLGP21583 273 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 FGF7P21781 194 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 DDTP30046 118 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 GALR1P47211 349 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 RPL30P62888 115 aaKnown RBP7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 FOXL1Q12952 345 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 CDPF1Q6NVV7 123 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 MCEMP1Q8IX19 187 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 IL1F10Q8WWZ1 152 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 C2orf88Q9BSF0 95 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 KCNIP2Q9NS61 270 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 OR6C3Q9NZP0 311 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 CEP290O15078 2479 aa7.73□□□□□ -1.17
PDGFRA-208ENST00000509490 ARID1AO14497 2285 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 TSTD3H0UI37 97 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 CLDN1O95832 211 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 GZMHP20718 246 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 CCKARP32238 428 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 MEOX1P50221 254 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 PLGLB1Q02325 96 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 COL10A1Q03692 680 aa7.72□□□□□ -1.17
PDGFRA-208ENST00000509490 SRYQ05066 204 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms