RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 ELF5Q9UKW6 265 aaPredicted RBP8.42□□□□□ -1.06
POLR2J3-213ENST00000508848 TRRAPQ9Y4A5 3859 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 TNCP24821 2201 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 A0A075B6Q4 140 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 NDUFA3O95167 84 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 PRSS3P35030 304 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 LGALS7P47929 136 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 REG1BP48304 166 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 KRTAP10-3P60369 221 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 HES1Q14469 280 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 ABCA11PQ4W5N1 156 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 TMEM69Q5SWH9 247 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 PDPNQ86YL7 162 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 BEST4Q8NFU0 473 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 OR5AP2Q8NGF4 316 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 CHPT1Q8WUD6 406 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 NUDCD2Q8WVJ2 157 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 GINS4Q9BRT9 223 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 GON7Q9BXV9 100 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 PARP12Q9H0J9 701 aaKnown RBP8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 COMMD3Q9UBI1 195 aa8.41□□□□□ -1.06
POLR2J3-213ENST00000508848 IGKV1D-8A0A087WSZ0 117 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 ZNF736B4DX44 427 aaPredicted RBP8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 H0YJW9 148 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 BET1O15155 118 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 ST8SIA5O15466 376 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 SPDEFO95238 335 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 IGF1P05019 195 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 OR8U9P0C7N5 309 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 SLC6A1P30531 599 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 VDAC2P45880 294 aaPredicted RBP8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 GPR12P47775 334 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 OR3A3P47888 321 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 LUMP51884 338 aaPredicted RBP8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 TAS2R20P59543 309 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 ACTBP60709 375 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 CD83Q01151 205 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 Q6ZS46 218 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 OVCH2Q7RTZ1 564 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 CLVS1Q8IUQ0 354 aaPredicted RBP8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 ZBTB34Q8NCN2 500 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 OR8U1Q8NH10 309 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 DYNC2LI1Q8TCX1 351 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 GPX8Q8TED1 209 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 TAF15Q92804 592 aaKnown RBP eCLIP8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 BORCS5Q969J3 196 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 ABHD14BQ96IU4 210 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 MRPL20Q9BYC9 149 aaKnown RBP8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 NECAP2Q9NVZ3 263 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 CCDC59Q9P031 241 aaKnown RBP8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 ZNF107Q9UII5 783 aaPredicted RBP8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 WASHC3Q9Y3C0 194 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 A3GALT2U3KPV4 340 aa8.4□□□□□ -1.06
POLR2J3-213ENST00000508848 IGHV3-72A0A0B4J1Y9 119 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 M0QZ24 198 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 AP4M1O00189 453 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 HLA-DRB1P01911 266 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 ELK1P19419 428 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 THBS3P49746 956 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 F2RL1P55085 397 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 TAS2R46P59540 309 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 MRPS10P82664 201 aaKnown RBP8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 SSBP1Q04837 148 aaKnown RBP8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 HNF4GQ14541 408 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 C5orf64Q2M2E5 130 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 FBLN7Q53RD9 439 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 RPL39P5Q59GN2 51 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 CENPVQ7Z7K6 275 aaPredicted RBP8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 NDUFA11Q86Y39 141 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 FOXRED2Q8IWF2 684 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 KLHDC1Q8N7A1 406 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 ZNF645Q8N7E2 425 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 RNF152Q8N8N0 203 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 DDB2Q92466 427 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 TSNAXQ99598 290 aaKnown RBP8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 HSD17B10Q99714 261 aaKnown RBP8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 RASL11BQ9BPW5 248 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 NXF2Q9GZY0 626 aaKnown RBP8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 SDHAF2Q9NX18 166 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 SIGLEC9Q9Y336 463 aa8.39□□□□□ -1.07
POLR2J3-213ENST00000508848 NCBP2LA6PVI3 153 aaKnown RBP8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 RRHO14718 337 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 NBR2O15453 112 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 HPGDSO60760 199 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 PEX14O75381 377 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 APOA2P02652 100 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 EIF4EP06730 217 aaKnown RBP8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 OR5H8P0DN80 308 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 TBPP20226 339 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 DUTP33316 252 aaKnown RBP8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 CRIP2P52943 208 aaPredicted RBP8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 DYRK1AQ13627 763 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 SPCS2Q15005 226 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 CDK10Q15131 360 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 TMEM177Q53S58 311 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 ZNF660Q6AZW8 331 aaPredicted RBP8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 LIN54Q6MZP7 749 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 ZNF66Q6ZN08 573 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 SLC35E3Q7Z769 313 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 LYSMD2Q8IV50 215 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms