RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 TRBV6-7A0A0A0MS04 114 aa12.37□□□□□ -0.43
COL1A1-211ENST00000507689 M0R1X1 148 aa12.37□□□□□ -0.43
COL1A1-211ENST00000507689 CT45A6P0DMU7 189 aa12.37□□□□□ -0.43
COL1A1-211ENST00000507689 CT45A5P0DMU8 189 aa12.37□□□□□ -0.43
COL1A1-211ENST00000507689 CT45A7P0DMV0 189 aa12.37□□□□□ -0.43
COL1A1-211ENST00000507689 ARPC4P59998 168 aa12.37□□□□□ -0.43
COL1A1-211ENST00000507689 TAGLNQ01995 201 aaKnown RBP12.37□□□□□ -0.43
COL1A1-211ENST00000507689 CXorf66Q5JRM2 361 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-211ENST00000507689 LIN54Q6MZP7 749 aa12.37□□□□□ -0.43
COL1A1-211ENST00000507689 Q6ZS49 121 aa12.37□□□□□ -0.43
COL1A1-211ENST00000507689 FAM71E2Q8N5Q1 922 aa12.37□□□□□ -0.43
COL1A1-211ENST00000507689 WIPF2Q8TF74 440 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-211ENST00000507689 TSNAXQ99598 290 aaKnown RBP12.37□□□□□ -0.43
COL1A1-211ENST00000507689 RNF5Q99942 180 aa12.37□□□□□ -0.43
COL1A1-211ENST00000507689 AGMATQ9BSE5 352 aa12.37□□□□□ -0.43
COL1A1-211ENST00000507689 PARP12Q9H0J9 701 aaKnown RBP12.37□□□□□ -0.43
COL1A1-211ENST00000507689 PLSCR3Q9NRY6 295 aa12.37□□□□□ -0.43
COL1A1-211ENST00000507689 ZFP57Q9NU63 452 aa12.37□□□□□ -0.43
COL1A1-211ENST00000507689 LINC00527Q9UJ94 153 aa12.37□□□□□ -0.43
COL1A1-211ENST00000507689 IGKV1-6A0A0C4DH72 117 aa12.36□□□□□ -0.43
COL1A1-211ENST00000507689 CD33P20138 364 aa12.36□□□□□ -0.43
COL1A1-211ENST00000507689 RPS16P62249 146 aaKnown RBP12.36□□□□□ -0.43
COL1A1-211ENST00000507689 RTL8BQ17RB0 113 aa12.36□□□□□ -0.43
COL1A1-211ENST00000507689 HIST2H2BDQ6DRA6 164 aa12.36□□□□□ -0.43
COL1A1-211ENST00000507689 GLDNQ6ZMI3 551 aaPredicted RBP12.36□□□□□ -0.43
COL1A1-211ENST00000507689 DRAXINQ8NBI3 349 aaPredicted RBP12.36□□□□□ -0.43
COL1A1-211ENST00000507689 ABHD5Q8WTS1 349 aa12.36□□□□□ -0.43
COL1A1-211ENST00000507689 NUDCD2Q8WVJ2 157 aa12.36□□□□□ -0.43
COL1A1-211ENST00000507689 SMIM31A0A1B0GVY4 71 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 H0YJW9 148 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 SLC22A5O76082 557 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 SLC6A1P30531 599 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 CBX5P45973 191 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 LUMP51884 338 aaPredicted RBP12.35□□□□□ -0.43
COL1A1-211ENST00000507689 C5orf64Q2M2E5 130 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 ZNF260Q3ZCT1 412 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 UBE2NLQ5JXB2 153 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 CNIH2Q6PI25 160 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 TMEM65Q6PI78 240 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 PDPNQ86YL7 162 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 NPBQ8NG41 125 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 OR5AN1Q8NGI8 311 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 OR5H6Q8NGV6 325 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 FLYWCH2Q96CP2 140 aaKnown RBP12.35□□□□□ -0.43
COL1A1-211ENST00000507689 KCTD12Q96CX2 325 aaKnown RBP12.35□□□□□ -0.43
COL1A1-211ENST00000507689 ADTRPQ96IZ2 230 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 FUNDC2Q9BWH2 189 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 TOLLIPQ9H0E2 274 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 PARP11Q9NR21 331 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 SLC35D1Q9NTN3 355 aa12.35□□□□□ -0.43
COL1A1-211ENST00000507689 NBEAL1Q6ZS30 2694 aa12.34□□□□□ -0.43
COL1A1-211ENST00000507689 RRHO14718 337 aa12.34□□□□□ -0.43
COL1A1-211ENST00000507689 HLA-DRB1P01911 266 aa12.34□□□□□ -0.43
COL1A1-211ENST00000507689 RRASP10301 218 aa12.34□□□□□ -0.43
COL1A1-211ENST00000507689 RPS19P39019 145 aaKnown RBP12.34□□□□□ -0.43
COL1A1-211ENST00000507689 THBS3P49746 956 aa12.34□□□□□ -0.43
COL1A1-211ENST00000507689 SAMD12Q8N8I0 201 aa12.34□□□□□ -0.43
COL1A1-211ENST00000507689 MRPS26Q9BYN8 205 aaKnown RBP12.34□□□□□ -0.43
COL1A1-211ENST00000507689 IFT46Q9NQC8 304 aa12.34□□□□□ -0.43
COL1A1-211ENST00000507689 ANXA10Q9UJ72 324 aa12.34□□□□□ -0.43
COL1A1-211ENST00000507689 GAB2Q9UQC2 676 aa12.34□□□□□ -0.43
COL1A1-211ENST00000507689 TRIM64CA6NLI5 447 aa12.33□□□□□ -0.44
COL1A1-211ENST00000507689 SPDEFO95238 335 aa12.33□□□□□ -0.44
COL1A1-211ENST00000507689 ELANEP08246 267 aa12.33□□□□□ -0.44
COL1A1-211ENST00000507689 CD40LGP29965 261 aa12.33□□□□□ -0.44
COL1A1-211ENST00000507689 RPL23AP62750 156 aaKnown RBP12.33□□□□□ -0.44
COL1A1-211ENST00000507689 DEFA6Q01524 100 aa12.33□□□□□ -0.44
COL1A1-211ENST00000507689 TMEM267Q0VDI3 215 aaPredicted RBP12.33□□□□□ -0.44
COL1A1-211ENST00000507689 FOXE3Q13461 319 aa12.33□□□□□ -0.44
COL1A1-211ENST00000507689 TMEM69Q5SWH9 247 aa12.33□□□□□ -0.44
COL1A1-211ENST00000507689 C10orf99Q6UWK7 81 aa12.33□□□□□ -0.44
COL1A1-211ENST00000507689 H1FOOQ8IZA3 346 aaPredicted RBP12.33□□□□□ -0.44
COL1A1-211ENST00000507689 BEST4Q8NFU0 473 aa12.33□□□□□ -0.44
COL1A1-211ENST00000507689 AP3S1Q92572 193 aa12.33□□□□□ -0.44
COL1A1-211ENST00000507689 SLC25A46Q96AG3 418 aa12.33□□□□□ -0.44
COL1A1-211ENST00000507689 SLC25A38Q96DW6 304 aa12.33□□□□□ -0.44
COL1A1-211ENST00000507689 HSPB9Q9BQS6 159 aa12.33□□□□□ -0.44
COL1A1-211ENST00000507689 OR51J1Q9H342 316 aa12.33□□□□□ -0.44
COL1A1-211ENST00000507689 SDHAF2Q9NX18 166 aa12.33□□□□□ -0.44
COL1A1-211ENST00000507689 METTL1Q9UBP6 276 aaKnown RBP12.33□□□□□ -0.44
COL1A1-211ENST00000507689 ELF5Q9UKW6 265 aaPredicted RBP12.33□□□□□ -0.44
COL1A1-211ENST00000507689 OR2W1Q9Y3N9 320 aa12.33□□□□□ -0.44
COL1A1-211ENST00000507689 LINC01548A6NM66 108 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 XRCC3O43542 346 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 NDUFA3O95167 84 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 IGF1P05019 195 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 CNTFRP26992 372 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 LGALS7P47929 136 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 RORCP51449 518 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 VBP1P61758 197 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 TCTEX1D4Q5JR98 221 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 ZNF660Q6AZW8 331 aaPredicted RBP12.32□□□□□ -0.44
COL1A1-211ENST00000507689 MZT2AQ6P582 158 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 GPR141Q7Z602 305 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 KLHL30-AS1Q8NEE0 82 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 OR13F1Q8NGS4 319 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 ACOT12Q8WYK0 555 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 FBXL15Q9H469 300 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 AUNIPQ9H7T9 357 aa12.32□□□□□ -0.44
COL1A1-211ENST00000507689 NECAP2Q9NVZ3 263 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms