RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 AKIRIN2Q53H80 203 aa11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 ZNF367Q7RTV3 350 aa11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 ZNF429Q86V71 674 aa11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 PDPNQ86YL7 162 aa11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 OR4A4PQ8NGN8 299 aa11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 TOLLIPQ9H0E2 274 aa11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 C11orf54Q9H0W9 315 aaPredicted RBP11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 SLA2Q9H6Q3 261 aa11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 GAB2Q9UQC2 676 aa11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 DNAH3Q8TD57 4116 aa11.24□□□□□ -0.61
HMGCS1-203ENST00000507004 A0A0A6YYD4 124 aa11.23□□□□□ -0.61
HMGCS1-203ENST00000507004 TRDCB7Z8K6 153 aa11.23□□□□□ -0.61
HMGCS1-203ENST00000507004 G3V318 75 aa11.23□□□□□ -0.61
HMGCS1-203ENST00000507004 MRPS14O60783 128 aaKnown RBP11.23□□□□□ -0.61
HMGCS1-203ENST00000507004 TFAP2AP05549 437 aa11.23□□□□□ -0.61
HMGCS1-203ENST00000507004 CD3GP09693 182 aa11.23□□□□□ -0.61
HMGCS1-203ENST00000507004 GALP22466 123 aa11.23□□□□□ -0.61
HMGCS1-203ENST00000507004 VEGFCP49767 419 aa11.23□□□□□ -0.61
HMGCS1-203ENST00000507004 RPS25P62851 125 aaKnown RBP11.23□□□□□ -0.61
HMGCS1-203ENST00000507004 CX3CL1P78423 397 aa11.23□□□□□ -0.61
HMGCS1-203ENST00000507004 C2orf76Q3KRA6 126 aa11.23□□□□□ -0.61
HMGCS1-203ENST00000507004 ZNF562Q6V9R5 426 aa11.23□□□□□ -0.61
HMGCS1-203ENST00000507004 ARHGAP5-AS1Q96IT6 56 aa11.23□□□□□ -0.61
HMGCS1-203ENST00000507004 WWC2-AS2Q96NR7 200 aa11.23□□□□□ -0.61
HMGCS1-203ENST00000507004 PECRQ9BY49 303 aa11.23□□□□□ -0.61
HMGCS1-203ENST00000507004 FBXL15Q9H469 300 aa11.23□□□□□ -0.61
HMGCS1-203ENST00000507004 NKX1-2Q9UD57 310 aaPredicted RBP11.23□□□□□ -0.61
HMGCS1-203ENST00000507004 TRAV1-2A0A0B4J238 106 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 A0A1W2PN81 502 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 METTL21EPA6NDL7 271 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 MYL9P24844 172 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 CNTFRP26992 372 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 CHRNA7P36544 502 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 ECI1P42126 302 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 LGALS7P47929 136 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 LUMP51884 338 aaPredicted RBP11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 TMEM50BP56557 158 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 CBX3Q13185 183 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 KIAA0141Q14154 515 aaPredicted RBP11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 ECSCRQ19T08 205 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 ZNF260Q3ZCT1 412 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 RPL39P5Q59GN2 51 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 ABHD5Q8WTS1 349 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 FLYWCH2Q96CP2 140 aaKnown RBP11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 RAB3CQ96E17 227 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 ABHD14BQ96IU4 210 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 RITA1Q96K30 269 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 TMEM68Q96MH6 324 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 KLK15Q9H2R5 256 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 ZNF256Q9Y2P7 627 aaPredicted RBP11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 NUBP2Q9Y5Y2 271 aa11.22□□□□□ -0.61
HMGCS1-203ENST00000507004 LINC01619G3V211 115 aa11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 H3BUA1 57 aa11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 OVOL1O14753 267 aa11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 LDLRAD4O15165 306 aa11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 LGALS1P09382 135 aaKnown RBP11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 SCTP09683 121 aa11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 RAB6AP20340 208 aa11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 FABP5Q01469 135 aa11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 SRSF7Q16629 238 aaKnown RBP eCLIP11.21□□□□□ -0.618e-8■□□□□ 10.4
HMGCS1-203ENST00000507004 ACTBL2Q562R1 376 aa11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 C19orf54Q5BKX5 351 aa11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 PPP1R27Q86WC6 154 aa11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 NRG4Q8WWG1 115 aa11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 GFI1Q99684 422 aa11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 KCNK15Q9H427 330 aa11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 GNB4Q9HAV0 340 aa11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 RDH8Q9NYR8 311 aa11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 OR1A1Q9P1Q5 309 aa11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 METTL1Q9UBP6 276 aaKnown RBP11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 SCOCQ9UIL1 159 aa11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 LSM4Q9Y4Z0 139 aaKnown RBP11.21□□□□□ -0.61
HMGCS1-203ENST00000507004 ANKRD65E5RJM6 399 aa11.2□□□□□ -0.62
HMGCS1-203ENST00000507004 FABP7O15540 132 aa11.2□□□□□ -0.62
HMGCS1-203ENST00000507004 RRASP10301 218 aa11.2□□□□□ -0.62
HMGCS1-203ENST00000507004 RPS16P62249 146 aaKnown RBP11.2□□□□□ -0.62
HMGCS1-203ENST00000507004 PSG5Q15238 335 aa11.2□□□□□ -0.62
HMGCS1-203ENST00000507004 MOGAT2Q3SYC2 334 aa11.2□□□□□ -0.62
HMGCS1-203ENST00000507004 UNQ5815/PRO19632Q6UWF5 114 aa11.2□□□□□ -0.62
HMGCS1-203ENST00000507004 C5orf24Q7Z6I8 188 aa11.2□□□□□ -0.62
HMGCS1-203ENST00000507004 OR10J5Q8NHC4 309 aa11.2□□□□□ -0.62
HMGCS1-203ENST00000507004 HDHD3Q9BSH5 251 aaPredicted RBP11.2□□□□□ -0.62
HMGCS1-203ENST00000507004 CABLES2Q9BTV7 478 aa11.2□□□□□ -0.62
HMGCS1-203ENST00000507004 SORL1Q92673 2214 aa11.19□□□□□ -0.62
HMGCS1-203ENST00000507004 TMEM272A0A1B0GTI8 110 aa11.19□□□□□ -0.62
HMGCS1-203ENST00000507004 TRDV1A0A1B0GX56 115 aa11.19□□□□□ -0.62
HMGCS1-203ENST00000507004 IFITM5A6NNB3 132 aa11.19□□□□□ -0.62
HMGCS1-203ENST00000507004 SCGNO76038 276 aa11.19□□□□□ -0.62
HMGCS1-203ENST00000507004 CLDN12P56749 244 aa11.19□□□□□ -0.62
HMGCS1-203ENST00000507004 NDPQ00604 133 aa11.19□□□□□ -0.62
HMGCS1-203ENST00000507004 PLAC9Q5JTB6 97 aa11.19□□□□□ -0.62
HMGCS1-203ENST00000507004 GLDNQ6ZMI3 551 aaPredicted RBP11.19□□□□□ -0.62
HMGCS1-203ENST00000507004 OR6Q1Q8NGQ2 317 aa11.19□□□□□ -0.62
HMGCS1-203ENST00000507004 OR10R2Q8NGX6 335 aa11.19□□□□□ -0.62
HMGCS1-203ENST00000507004 ARPC1AQ92747 370 aa11.19□□□□□ -0.62
HMGCS1-203ENST00000507004 ADTRPQ96IZ2 230 aa11.19□□□□□ -0.62
HMGCS1-203ENST00000507004 SLC35D1Q9NTN3 355 aa11.19□□□□□ -0.62
HMGCS1-203ENST00000507004 NDUFB11Q9NX14 153 aa11.19□□□□□ -0.62
HMGCS1-203ENST00000507004 RAB26Q9ULW5 256 aa11.19□□□□□ -0.62
HMGCS1-203ENST00000507004 TRBV6-7A0A0A0MS04 114 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms