RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 A0A075B6Q4 140 aa13.02□□□□□ -0.33
PDLIM7-215ENST00000506161 ITGB1BP1O14713 200 aa13.02□□□□□ -0.33
PDLIM7-215ENST00000506161 RAB29O14966 203 aa13.02□□□□□ -0.33
PDLIM7-215ENST00000506161 IGLV1-40P01703 118 aa13.02□□□□□ -0.33
PDLIM7-215ENST00000506161 IGKV1-16P04430 117 aa13.02□□□□□ -0.33
PDLIM7-215ENST00000506161 ELANEP08246 267 aa13.02□□□□□ -0.33
PDLIM7-215ENST00000506161 FCGR3AP08637 254 aa13.02□□□□□ -0.33
PDLIM7-215ENST00000506161 GSTT2P0CG29 244 aa13.02□□□□□ -0.33
PDLIM7-215ENST00000506161 GSTT2BP0CG30 244 aa13.02□□□□□ -0.33
PDLIM7-215ENST00000506161 CDX1P47902 265 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-215ENST00000506161 LUMP51884 338 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-215ENST00000506161 CXorf66Q5JRM2 361 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-215ENST00000506161 OR5AN1Q8NGI8 311 aa13.02□□□□□ -0.33
PDLIM7-215ENST00000506161 PTX4Q96A99 478 aa13.02□□□□□ -0.33
PDLIM7-215ENST00000506161 RIMS4Q9H426 269 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-215ENST00000506161 RDH8Q9NYR8 311 aa13.02□□□□□ -0.33
PDLIM7-215ENST00000506161 RAB22AQ9UL26 194 aa13.02□□□□□ -0.33
PDLIM7-215ENST00000506161 TRDCB7Z8K6 153 aa13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 RRHO14718 337 aa13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 RRP9O43818 475 aaKnown RBP13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 RAB3BP20337 219 aa13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 VDAC1P21796 283 aa13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 ZBTB25P24278 435 aa13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 GNB1P62873 340 aa13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 SSBP2P81877 361 aaPredicted RBP13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 KIR2DS1Q14954 304 aa13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 ZNF491Q8N8L2 437 aa13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 OR10R2Q8NGX6 335 aa13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 RAB3CQ96E17 227 aa13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 OR5B12Q96R08 314 aa13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 FAM103A1Q9BTL3 118 aaKnown RBP13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 CABLES2Q9BTV7 478 aa13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 ALX4Q9H161 411 aaPredicted RBP13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 TXNL4BQ9NX01 149 aaKnown RBP13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 BLOC1S6Q9UL45 172 aa13.01□□□□□ -0.33
PDLIM7-215ENST00000506161 TRAV41A0A0B4J266 112 aa13□□□□□ -0.33
PDLIM7-215ENST00000506161 CLEC2LP0C7M8 214 aa13□□□□□ -0.33
PDLIM7-215ENST00000506161 HIST1H1DP16402 221 aaKnown RBP13□□□□□ -0.33
PDLIM7-215ENST00000506161 RAB25P57735 213 aa13□□□□□ -0.33
PDLIM7-215ENST00000506161 CX3CL1P78423 397 aa13□□□□□ -0.33
PDLIM7-215ENST00000506161 FHL3Q13643 280 aa13□□□□□ -0.33
PDLIM7-215ENST00000506161 ECSCRQ19T08 205 aa13□□□□□ -0.33
PDLIM7-215ENST00000506161 LIN54Q6MZP7 749 aa13□□□□□ -0.33
PDLIM7-215ENST00000506161 C11orf87Q6NUJ2 197 aa13□□□□□ -0.33
PDLIM7-215ENST00000506161 MINDY2Q8NBR6 621 aa13□□□□□ -0.33
PDLIM7-215ENST00000506161 CLCC1Q96S66 551 aa13□□□□□ -0.33
PDLIM7-215ENST00000506161 TOLLIPQ9H0E2 274 aa13□□□□□ -0.33
PDLIM7-215ENST00000506161 OR51E2Q9H255 320 aa13□□□□□ -0.33
PDLIM7-215ENST00000506161 DNAH9Q9NYC9 4486 aa13□□□□□ -0.33
PDLIM7-215ENST00000506161 OR5H14A6NHG9 310 aa12.99□□□□□ -0.33
PDLIM7-215ENST00000506161 I3L521 148 aa12.99□□□□□ -0.33
PDLIM7-215ENST00000506161 FABP7O15540 132 aa12.99□□□□□ -0.33
PDLIM7-215ENST00000506161 HSPA12AO43301 675 aa12.99□□□□□ -0.33
PDLIM7-215ENST00000506161 PSMB9P28065 219 aa12.99□□□□□ -0.33
PDLIM7-215ENST00000506161 PSG5Q15238 335 aa12.99□□□□□ -0.33
PDLIM7-215ENST00000506161 C4orf3Q8WVX3 66 aa12.99□□□□□ -0.33
PDLIM7-215ENST00000506161 WASHC3Q9Y3C0 194 aa12.99□□□□□ -0.33
PDLIM7-215ENST00000506161 TENM3Q9P273 2699 aa12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 PDCD5O14737 125 aa12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 ARPC1BO15143 372 aaKnown RBP12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 BET1O15155 118 aa12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 DUS4LO95620 317 aaKnown RBP12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 IGLV2-23P01705 113 aa12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 RAB6AP20340 208 aa12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 MYL9P24844 172 aa12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 CRIP2P52943 208 aaPredicted RBP12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 MRGPRG-AS1Q2M3A8 158 aa12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 OR11H1Q8NG94 326 aa12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 OR4A4PQ8NGN8 299 aa12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 OR8U1Q8NH10 309 aa12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 EDARADDQ8WWZ3 215 aa12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 GON7Q9BXV9 100 aa12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 SCOCQ9UIL1 159 aa12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 NUBP2Q9Y5Y2 271 aa12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 A3GALT2U3KPV4 340 aa12.98□□□□□ -0.33
PDLIM7-215ENST00000506161 TRBV6-7A0A0A0MS04 114 aa12.97□□□□□ -0.33
PDLIM7-215ENST00000506161 A0A1W2PN81 502 aa12.97□□□□□ -0.33
PDLIM7-215ENST00000506161 H7C2Y5 167 aa12.97□□□□□ -0.33
PDLIM7-215ENST00000506161 M0R1X1 148 aa12.97□□□□□ -0.33
PDLIM7-215ENST00000506161 OR8U9P0C7N5 309 aa12.97□□□□□ -0.33
PDLIM7-215ENST00000506161 SLC6A1P30531 599 aa12.97□□□□□ -0.33
PDLIM7-215ENST00000506161 FGF9P31371 208 aaPredicted RBP12.97□□□□□ -0.33
PDLIM7-215ENST00000506161 CHRNA7P36544 502 aa12.97□□□□□ -0.33
PDLIM7-215ENST00000506161 PSMD7P51665 324 aa12.97□□□□□ -0.33
PDLIM7-215ENST00000506161 PJVKQ0ZLH3 352 aa12.97□□□□□ -0.33
PDLIM7-215ENST00000506161 OR2D2Q9H210 308 aa12.97□□□□□ -0.33
PDLIM7-215ENST00000506161 SDHAF2Q9NX18 166 aa12.97□□□□□ -0.33
PDLIM7-215ENST00000506161 KIAA1456Q9P272 454 aa12.97□□□□□ -0.33
PDLIM7-215ENST00000506161 METTL1Q9UBP6 276 aaKnown RBP12.97□□□□□ -0.33
PDLIM7-215ENST00000506161 MGAT4AQ9UM21 535 aa12.97□□□□□ -0.33
PDLIM7-215ENST00000506161 COL7A1Q02388 2944 aa12.97□□□□□ -0.33
PDLIM7-215ENST00000506161 TNCP24821 2201 aa12.97□□□□□ -0.33
PDLIM7-215ENST00000506161 MRPS14O60783 128 aaKnown RBP12.96□□□□□ -0.33
PDLIM7-215ENST00000506161 CA2P00918 260 aa12.96□□□□□ -0.33
PDLIM7-215ENST00000506161 GSTP1P09211 210 aaKnown RBP12.96□□□□□ -0.33
PDLIM7-215ENST00000506161 GALP22466 123 aa12.96□□□□□ -0.33
PDLIM7-215ENST00000506161 RAB9AP51151 201 aa12.96□□□□□ -0.33
PDLIM7-215ENST00000506161 OR5H6Q8NGV6 325 aa12.96□□□□□ -0.33
PDLIM7-215ENST00000506161 WWC2-AS2Q96NR7 200 aa12.96□□□□□ -0.33
PDLIM7-215ENST00000506161 ATG5Q9H1Y0 275 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms