RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 Q96M66 194 aa6.31□□□□□ -1.4
SNF8-204ENST00000506104 TSNAXQ99598 290 aaKnown RBP6.31□□□□□ -1.4
SNF8-204ENST00000506104 SULT4A1Q9BR01 284 aa6.31□□□□□ -1.4
SNF8-204ENST00000506104 C9orf16Q9BUW7 83 aa6.31□□□□□ -1.4
SNF8-204ENST00000506104 PARP12Q9H0J9 701 aaKnown RBP6.31□□□□□ -1.4
SNF8-204ENST00000506104 IFI27L2Q9H2X8 130 aa6.31□□□□□ -1.4
SNF8-204ENST00000506104 TPSG1Q9NRR2 321 aa6.31□□□□□ -1.4
SNF8-204ENST00000506104 CLEC2DQ9UHP7 191 aa6.31□□□□□ -1.4
SNF8-204ENST00000506104 ZNF221Q9UK13 617 aa6.31□□□□□ -1.4
SNF8-204ENST00000506104 EXOSC1Q9Y3B2 195 aaKnown RBP6.31□□□□□ -1.4
SNF8-204ENST00000506104 LRRC42Q9Y546 428 aa6.31□□□□□ -1.4
SNF8-204ENST00000506104 CEPT1Q9Y6K0 416 aa6.31□□□□□ -1.4
SNF8-204ENST00000506104 RYR2Q92736 4967 aa6.31□□□□□ -1.4
SNF8-204ENST00000506104 A0A0B4J203 849 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 A0A0G2JLM5 398 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 TRBV5-5A0A0J9YX44 114 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 IRGMA1A4Y4 181 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 IZUMO1RA6ND01 250 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 FAM90A7PA6NKC0 464 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 FAM90A23PA8MXZ1 464 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 H0YJW9 148 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 H3BNX3 289 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 M0R1X1 148 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 ARPC1BO15143 372 aaKnown RBP6.3□□□□□ -1.4
SNF8-204ENST00000506104 OGG1O15527 345 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 RBBP9O75884 186 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 ATP5HO75947 161 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 TPPPO94811 219 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 LY6G6CO95867 125 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 LALBAP00709 142 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 EGR2P11161 476 aaPredicted RBP6.3□□□□□ -1.4
SNF8-204ENST00000506104 DCKP27707 260 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 LGALS7P47929 136 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 LINC00205P59089 165 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 DYRK1AQ13627 763 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 PMS2P11Q13670 270 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 HMGN3Q15651 99 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 AKIRIN2Q53H80 203 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 YIF1BQ5BJH7 314 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 SIGIRRQ6IA17 410 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 CD200R1LQ6Q8B3 271 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 POC5Q8NA72 575 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 BVESQ8NE79 360 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 APH1BQ8WW43 257 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 CYGBQ8WWM9 190 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 SLC29A1Q99808 456 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 KCNK15Q9H427 330 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 FGF20Q9NP95 211 aaPredicted RBP6.3□□□□□ -1.4
SNF8-204ENST00000506104 SLC35D1Q9NTN3 355 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 MBNL3Q9NUK0 354 aaKnown RBP6.3□□□□□ -1.4
SNF8-204ENST00000506104 PLEKHJ1Q9NW61 149 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 OR1A1Q9P1Q5 309 aa6.3□□□□□ -1.4
SNF8-204ENST00000506104 PEF1Q9UBV8 284 aaKnown RBP6.3□□□□□ -1.4
SNF8-204ENST00000506104 SHISA3A0PJX4 238 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 CXorf65A6NEN9 183 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 MYL12BO14950 172 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 SC5DO75845 299 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 BRI3O95415 125 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 TRBV12-3P01733 135 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 CBX3Q13185 183 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 C19orf54Q5BKX5 351 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 RBM48Q5RL73 367 aaKnown RBP6.29□□□□□ -1.4
SNF8-204ENST00000506104 ZNF562Q6V9R5 426 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 Q8N402 240 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 DEFB125Q8N687 156 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 GGHQ92820 318 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 TMEM80Q96HE8 168 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 NEURL2Q9BR09 285 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 NICN1Q9BSH3 213 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 HDHD3Q9BSH5 251 aaPredicted RBP6.29□□□□□ -1.4
SNF8-204ENST00000506104 TMEM59Q9BXS4 323 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 C11orf54Q9H0W9 315 aaPredicted RBP6.29□□□□□ -1.4
SNF8-204ENST00000506104 WFDC10AQ9H1F0 79 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 SRD5A3Q9H8P0 318 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 SLC2A8Q9NY64 477 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 PEMTQ9UBM1 199 aa6.29□□□□□ -1.4
SNF8-204ENST00000506104 RBM7Q9Y580 266 aaKnown RBP6.29□□□□□ -1.4
SNF8-204ENST00000506104 TRBV5-7A0A0A0MS05 114 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 A8MZ25 164 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 SHOXO15266 292 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 WBP4O75554 376 aaKnown RBP6.28□□□□□ -1.4
SNF8-204ENST00000506104 IGKV1-16P04430 117 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 CSN3P07498 182 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 CELP19835 753 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 FSTP19883 344 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 ZBTB25P24278 435 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 CRIP2P52943 208 aaPredicted RBP6.28□□□□□ -1.4
SNF8-204ENST00000506104 PJVKQ0ZLH3 352 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 KLF5Q13887 457 aaPredicted RBP6.28□□□□□ -1.4
SNF8-204ENST00000506104 TNXAQ16473 311 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 RNLSQ5VYX0 342 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 GLT8D1Q68CQ7 371 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 FAM71F2Q6NXP2 309 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 ZFP1Q6P2D0 407 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 ZNF554Q86TJ5 538 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 NKAIN3Q8N8D7 197 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 EDARADDQ8WWZ3 215 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 ACOT12Q8WYK0 555 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 HARBI1Q96MB7 349 aa6.28□□□□□ -1.4
SNF8-204ENST00000506104 DERL3Q96Q80 235 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms