RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 CLEC2LP0C7M8 214 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 ARSBP15848 533 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 RAB3BP20337 219 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 PSMB8P28062 276 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 PPIFP30405 207 aaKnown RBP10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 PSMD7P51665 324 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 PPP5CP53041 499 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 CLDN12P56749 244 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 C19orf54Q5BKX5 351 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 FAM71F2Q6NXP2 309 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 NR2C2APQ86WQ0 139 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 FOXRED2Q8IWF2 684 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 NPBQ8NG41 125 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 OR51D1Q8NGF3 324 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 RAX2Q96IS3 184 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 DNAH9Q9NYC9 4486 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 COL7A1Q02388 2944 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 IGHV7-81A0A0B4J1V7 117 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 ST8SIA5O15466 376 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 CT45A6P0DMU7 189 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 CT45A5P0DMU8 189 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 CT45A7P0DMV0 189 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 SNRPBP14678 240 aaKnown RBP10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 SLC6A1P30531 599 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 ACTBP60709 375 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 FOXE3Q13461 319 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 PNLIPRP3Q17RR3 467 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 KHDC1LQ5JSQ8 128 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 SFXN4Q6P4A7 337 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 TEX38Q6PEX7 206 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 MOB1BQ7L9L4 216 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 CCDC190Q86UF4 302 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 ARHGAP5-AS1Q96IT6 56 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 Q9N2K0 584 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 PLEKHJ1Q9NW61 149 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 OR1A1Q9P1Q5 309 aa10.94□□□□□ -0.66
PDLIM7-211ENST00000504318 TMEM272A0A1B0GTI8 110 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 HLA-DRB1P01911 266 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 ELANEP08246 267 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 SLC2A2P11168 524 aaPredicted RBP10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 TNFSF8P32971 234 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 MYCNOSP40205 109 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 CDX1P47902 265 aaPredicted RBP10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 OR10A3P58181 314 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 HLA-DRB3P79483 266 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 NDPQ00604 133 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 FHL3Q13643 280 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 RAB11BQ15907 218 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 C2orf76Q3KRA6 126 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 MOGAT2Q3SYC2 334 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 RPL39P5Q59GN2 51 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 IDNKQ5T6J7 187 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 ZNF695Q8IW36 515 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 KLHL30-AS1Q8NEE0 82 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 MRAPQ8TCY5 172 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 PTX4Q96A99 478 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 FAM3DQ96BQ1 224 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 DUX3Q96PT4 197 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 RASL11BQ9BPW5 248 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 CCDC32Q9BV29 185 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 PECRQ9BY49 303 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 TOLLIPQ9H0E2 274 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 RIMS4Q9H426 269 aaPredicted RBP10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 ABRACLQ9P1F3 81 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 SLC23A1Q9UHI7 598 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 V9GY05 133 aa10.93□□□□□ -0.66
PDLIM7-211ENST00000504318 WI2-2373I1.2A0A1W2PRP0 233 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 H0YJW9 148 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 J3QRK9 145 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 CTDSP2O14595 271 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 RGS11O94810 467 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 DUS4LO95620 317 aaKnown RBP10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 IGLV1-40P01703 118 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 SCTP09683 121 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 PTBP1P26599 531 aaKnown RBP eCLIP10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 RANBP1P43487 201 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 VEGFCP49767 419 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 CRIP2P52943 208 aaPredicted RBP10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 SLC35B1P78383 322 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 MMDQ15546 238 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 C5orf64Q2M2E5 130 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 LAX1Q8IWV1 398 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 OR2AK2Q8NG84 335 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 OR5AN1Q8NGI8 311 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 IL1F10Q8WWZ1 152 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 URM1Q9BTM9 101 aaKnown RBP10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 C11orf54Q9H0W9 315 aaPredicted RBP10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 STEAP1Q9UHE8 339 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 FBXO7Q9Y3I1 522 aa10.92□□□□□ -0.66
PDLIM7-211ENST00000504318 SMIM30A4D0T7 59 aa10.91□□□□□ -0.66
PDLIM7-211ENST00000504318 G3V318 75 aa10.91□□□□□ -0.66
PDLIM7-211ENST00000504318 RAB27BO00194 218 aa10.91□□□□□ -0.66
PDLIM7-211ENST00000504318 RAB29O14966 203 aa10.91□□□□□ -0.66
PDLIM7-211ENST00000504318 ATP6V0E1O15342 81 aa10.91□□□□□ -0.66
PDLIM7-211ENST00000504318 NBR2O15453 112 aa10.91□□□□□ -0.66
PDLIM7-211ENST00000504318 EGR2P11161 476 aaPredicted RBP10.91□□□□□ -0.66
PDLIM7-211ENST00000504318 HOXD3P31249 432 aaPredicted RBP10.91□□□□□ -0.66
PDLIM7-211ENST00000504318 TALDO1P37837 337 aa10.91□□□□□ -0.66
PDLIM7-211ENST00000504318 SCAND1P57086 179 aa10.91□□□□□ -0.66
PDLIM7-211ENST00000504318 KIR2DS1Q14954 304 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms