RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 SYNGR2O43760 224 aa15.15■□□□□ 0.02
POLR2J3-209ENST00000504157 ZNF253O75346 499 aa15.15■□□□□ 0.02
POLR2J3-209ENST00000504157 IGLV3-19P01714 112 aa15.15■□□□□ 0.02
POLR2J3-209ENST00000504157 C1QTNF9P0C862 333 aa15.15■□□□□ 0.02
POLR2J3-209ENST00000504157 CBLN1P23435 193 aa15.15■□□□□ 0.02
POLR2J3-209ENST00000504157 LDLRAD2Q5SZI1 272 aa15.15■□□□□ 0.02
POLR2J3-209ENST00000504157 CHODLQ9H9P2 273 aa15.15■□□□□ 0.02
POLR2J3-209ENST00000504157 COL6A3P12111 3177 aa15.14■□□□□ 0.01
POLR2J3-209ENST00000504157 TMEM238LA0A1B0GVL6 79 aa15.14■□□□□ 0.01
POLR2J3-209ENST00000504157 F2Z2F3 143 aa15.14■□□□□ 0.01
POLR2J3-209ENST00000504157 CTXN2P0C2S0 81 aa15.14■□□□□ 0.01
POLR2J3-209ENST00000504157 RAC2P15153 192 aa15.14■□□□□ 0.01
POLR2J3-209ENST00000504157 FAM27BQ5VT28 67 aa15.14■□□□□ 0.01
POLR2J3-209ENST00000504157 ACSM6Q6P461 480 aa15.14■□□□□ 0.01
POLR2J3-209ENST00000504157 PNKDQ8N490 385 aa15.14■□□□□ 0.01
POLR2J3-209ENST00000504157 ZIC4Q8N9L1 334 aa15.14■□□□□ 0.01
POLR2J3-209ENST00000504157 OR10V1Q8NGI7 309 aa15.14■□□□□ 0.01
POLR2J3-209ENST00000504157 OR2AE1Q8NHA4 323 aa15.14■□□□□ 0.01
POLR2J3-209ENST00000504157 MRPL27Q9P0M9 148 aaKnown RBP15.14■□□□□ 0.01
POLR2J3-209ENST00000504157 IGKV1D-13A0A0B4J2D9 117 aa15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 RNF212BA8MTL3 300 aa15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 C11orf94C9JXX5 98 aa15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 NAPSAO96009 420 aa15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 IGKV1-13P0DP09 117 aa15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 KRTAP27-1Q3LI81 207 aa15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 TMPRSS7Q7RTY8 843 aa15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 SAXO1Q8IYX7 474 aa15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 SMRP1Q8NCR6 262 aa15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 THAP3Q8WTV1 239 aaPredicted RBP15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 GMPPAQ96IJ6 420 aaPredicted RBP15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 NRN1Q9NPD7 142 aa15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 TBL2Q9Y4P3 447 aaKnown RBP15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 NCOA6Q14686 2063 aaPredicted RBP15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 TRAV34A0A0B4J273 112 aa15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 SYNGR3O43761 229 aa15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 PDE6DO43924 150 aa15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 SERPINA7P05543 415 aa15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 ARL4DP49703 201 aa15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 RHBDD2Q6NTF9 364 aa15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 ANKRD37Q7Z713 158 aa15.13■□□□□ 0.01
POLR2J3-209ENST00000504157 SAA2-SAA4A0A096LPE2 208 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 UBE2L5PA0A1B0GUS4 154 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 IGLC7A0M8Q6 106 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 OR5B21A6NL26 309 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 PGLYRP1O75594 196 aaPredicted RBP15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 IAPPP10997 89 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 F2RP25116 425 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 TRIM61Q5EBN2 209 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 FADS6Q8N9I5 356 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 FAM103A1Q9BTL3 118 aaKnown RBP15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 METTL7AQ9H8H3 244 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 KIR2DS1A0A191URI9 304 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 RBFOX2O43251 390 aaKnown RBP eCLIP15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 OR7C1O76099 320 aaPredicted RBP15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 VAMP5O95183 116 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 KIR2DS4P43632 304 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 MLF1P58340 268 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 GNB1P62873 340 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 KIR2DS1Q14954 304 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 RSPO4Q2I0M5 234 aaPredicted RBP15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 Q6ZRM9 215 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 CADM4Q8NFZ8 388 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 OR10G9Q8NGN4 311 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 OR10G7Q8NGN6 311 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 LSM10Q969L4 123 aaKnown RBP15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 UHRF2Q96PU4 802 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 OR6C1Q96RD1 312 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 LRFN3Q9BTN0 628 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 CCL28Q9NRJ3 127 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 CD207Q9UJ71 328 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 RPH3ALQ9UNE2 315 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 RNF24Q9Y225 148 aa15.12■□□□□ 0.01
POLR2J3-209ENST00000504157 SPAG17Q6Q759 2223 aa15.11■□□□□ 0.01
POLR2J3-209ENST00000504157 MDFIC2A0A1B0GVS7 189 aa15.11■□□□□ 0.01
POLR2J3-209ENST00000504157 A0A1W2PPC4 97 aa15.11■□□□□ 0.01
POLR2J3-209ENST00000504157 REG1AP05451 166 aa15.11■□□□□ 0.01
POLR2J3-209ENST00000504157 KITLGP21583 273 aa15.11■□□□□ 0.01
POLR2J3-209ENST00000504157 S100GP29377 79 aa15.11■□□□□ 0.01
POLR2J3-209ENST00000504157 S100A7P31151 101 aa15.11■□□□□ 0.01
POLR2J3-209ENST00000504157 PLA2G5P39877 138 aa15.11■□□□□ 0.01
POLR2J3-209ENST00000504157 VAMP3Q15836 100 aa15.11■□□□□ 0.01
POLR2J3-209ENST00000504157 A0A1W2PRS3 328 aa15.11■□□□□ 0.01
POLR2J3-209ENST00000504157 PRRX1P54821 245 aa15.11■□□□□ 0.01
POLR2J3-209ENST00000504157 CLDN15P56746 228 aa15.11■□□□□ 0.01
POLR2J3-209ENST00000504157 SLC38A11Q08AI6 406 aa15.11■□□□□ 0.01
POLR2J3-209ENST00000504157 ZNF114Q8NC26 417 aa15.11■□□□□ 0.01
POLR2J3-209ENST00000504157 LMX1AQ8TE12 382 aa15.11■□□□□ 0.01
POLR2J3-209ENST00000504157 ZNF501Q96CX3 271 aaPredicted RBP15.11■□□□□ 0.01
POLR2J3-209ENST00000504157 CLN8Q9UBY8 286 aa15.11■□□□□ 0.01
POLR2J3-209ENST00000504157 IGLV3-12A0A075B6K2 115 aa15.1■□□□□ 0.01
POLR2J3-209ENST00000504157 hCG_38984A0A1B0GV85 526 aa15.1■□□□□ 0.01
POLR2J3-209ENST00000504157 DPRXA6NFQ7 191 aa15.1■□□□□ 0.01
POLR2J3-209ENST00000504157 PSG4Q00888 419 aa15.1■□□□□ 0.01
POLR2J3-209ENST00000504157 OR10G3Q8NGC4 313 aa15.1■□□□□ 0.01
POLR2J3-209ENST00000504157 OR1F12Q8NHA8 337 aa15.1■□□□□ 0.01
POLR2J3-209ENST00000504157 SMIM12Q96EX1 92 aa15.1■□□□□ 0.01
POLR2J3-209ENST00000504157 STRADBQ9C0K7 418 aa15.1■□□□□ 0.01
POLR2J3-209ENST00000504157 GNB4Q9HAV0 340 aa15.1■□□□□ 0.01
POLR2J3-209ENST00000504157 RBM7Q9Y580 266 aaKnown RBP15.1■□□□□ 0.01
POLR2J3-209ENST00000504157 GDF9O60383 454 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms