RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 AQP10Q96PS8 301 aa6.67□□□□□ -1.34
PDZRN3-212ENST00000498048 HSD17B10Q99714 261 aaKnown RBP6.67□□□□□ -1.34
PDZRN3-212ENST00000498048 ARPC5LQ9BPX5 153 aa6.67□□□□□ -1.34
PDZRN3-212ENST00000498048 ZNF471Q9BX82 626 aaPredicted RBP6.67□□□□□ -1.34
PDZRN3-212ENST00000498048 IFI27L2Q9H2X8 130 aa6.67□□□□□ -1.34
PDZRN3-212ENST00000498048 SDHAF2Q9NX18 166 aa6.67□□□□□ -1.34
PDZRN3-212ENST00000498048 TAS2R3Q9NYW6 316 aa6.67□□□□□ -1.34
PDZRN3-212ENST00000498048 KAAG1Q9UBP8 84 aa6.67□□□□□ -1.34
PDZRN3-212ENST00000498048 POMT1Q9Y6A1 747 aa6.67□□□□□ -1.34
PDZRN3-212ENST00000498048 U3KQ87 197 aa6.67□□□□□ -1.34
PDZRN3-212ENST00000498048 ABCA2Q9BZC7 2435 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 SAA2-SAA4A0A096LPE2 208 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 TRBV23-1A0A0A0MS06 115 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 A0A0G2JRQ6 117 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 A0A1W2PPR1 153 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 MSGN1A6NI15 193 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 E5RGE8 158 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 M0R1X1 148 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 ITGB1BP1O14713 200 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 ST8SIA3O43173 380 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 SSSCA1O60232 199 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 FCN3O75636 299 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 S1PR2O95136 353 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 NXPH3O95157 252 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 GOSR1O95249 250 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 CLDN1O95832 211 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 IGKV1-39P01597 117 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 IGHV3-7P01780 117 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 MBPP02686 304 aaPredicted RBP6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 IGKV1D-39P04432 117 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 DANCRP0C864 163 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 SAA2P0DJI9 122 aaPredicted RBP6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 CGB3P0DN86 165 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 CGB7P0DN87 165 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 CCL3L1P16619 93 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 PVALBP20472 110 aaPredicted RBP6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 NKX2-1P43699 371 aaPredicted RBP6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 RPL30P62888 115 aaKnown RBP6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 SPAG16Q8N0X2 631 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 TCTEX1D1Q8N7M0 179 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 ZNF680Q8NEM1 530 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 OR8B3Q8NGG8 313 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 ST8SIA2Q92186 375 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 CORO2AQ92828 525 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 LEAP2Q969E1 77 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 LSM10Q969L4 123 aaKnown RBP6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 RAB39BQ96DA2 213 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 RRNAD1Q96FB5 475 aaKnown RBP6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 OR8B2Q96RD0 313 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 RPUSD1Q9UJJ7 312 aaKnown RBP6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 LAMP3Q9UQV4 416 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 NSG2Q9Y328 171 aa6.66□□□□□ -1.34
PDZRN3-212ENST00000498048 DOPEY1Q5JWR5 2465 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 A0A1W2PPE3 182 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 CLEC18AA5D8T8 446 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 LINC00473A8K010 186 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 F5H0A9 414 aaPredicted RBP6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 PPIHO43447 177 aaKnown RBP6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 RAMP3O60896 148 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 LY6HO94772 140 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 ATG12O94817 140 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 FSTL3O95633 263 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 IGKV1-5P01602 117 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 SLC25A6P12236 298 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 COL8A2P25067 703 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 CDKN1AP38936 164 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 KIR2DS2P43631 304 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 LPAR6P43657 344 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 VAMP2P63027 116 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 MRPS11P82912 194 aaKnown RBP6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 ZNF585BQ52M93 769 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 RPL39P5Q59GN2 51 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 ALKAL2Q6UX46 152 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 OR8H3Q8N146 312 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 LYG1Q8N1E2 194 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 CLEC18CQ8NCF0 446 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 ZNF439Q8NDP4 499 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 OR10A7Q8NGE5 316 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 NEIL1Q96FI4 390 aaPredicted RBP6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 AGMATQ9BSE5 352 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 RNF126Q9BV68 326 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 LINC00574Q9H8X3 128 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 PLEKHA2Q9HB19 425 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 FAM212BQ9NTI7 297 aaPredicted RBP6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 CACNG5Q9UF02 275 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 ITGB1BP2Q9UKP3 347 aa6.65□□□□□ -1.34
PDZRN3-212ENST00000498048 WNK2Q9Y3S1 2297 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 A0A1B0GU03 582 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 C17orf98A8MV24 154 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 TNFRSF13BO14836 293 aaPredicted RBP6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 RAB29O14966 203 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 KCNAB3O43448 404 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 GPR137BO60478 399 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 FCGR3BO75015 233 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 MMP23AO75900 390 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 C1QL1O75973 258 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 CFDP00746 253 aaPredicted RBP6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 HKR1P10072 659 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 TPT1P13693 172 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms