RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 SLC25A38Q96DW6 304 aa11.56□□□□□ -0.56
ATG4B-224ENST00000494132 C5orf30Q96GV9 206 aa11.56□□□□□ -0.56
ATG4B-224ENST00000494132 GINS4Q9BRT9 223 aa11.56□□□□□ -0.56
ATG4B-224ENST00000494132 ST6GALNAC5Q9BVH7 336 aa11.56□□□□□ -0.56
ATG4B-224ENST00000494132 FBXL15Q9H469 300 aa11.56□□□□□ -0.56
ATG4B-224ENST00000494132 VCX3AQ9NNX9 186 aa11.56□□□□□ -0.56
ATG4B-224ENST00000494132 ZNF221Q9UK13 617 aa11.56□□□□□ -0.56
ATG4B-224ENST00000494132 TRBV6-7A0A0A0MS04 114 aa11.55□□□□□ -0.56
ATG4B-224ENST00000494132 OR5H14A6NHG9 310 aa11.55□□□□□ -0.56
ATG4B-224ENST00000494132 NUDT19A8MXV4 375 aa11.55□□□□□ -0.56
ATG4B-224ENST00000494132 M0R1X1 148 aa11.55□□□□□ -0.56
ATG4B-224ENST00000494132 PRB2P02812 416 aaPredicted RBP11.55□□□□□ -0.56
ATG4B-224ENST00000494132 RPLP1P05386 114 aaKnown RBP11.55□□□□□ -0.56
ATG4B-224ENST00000494132 GSTP1P09211 210 aaKnown RBP11.55□□□□□ -0.56
ATG4B-224ENST00000494132 PTHLHP12272 177 aa11.55□□□□□ -0.56
ATG4B-224ENST00000494132 RPL23AP62750 156 aaKnown RBP11.55□□□□□ -0.56
ATG4B-224ENST00000494132 ZNF260Q3ZCT1 412 aa11.55□□□□□ -0.56
ATG4B-224ENST00000494132 HACD4Q5VWC8 232 aa11.55□□□□□ -0.56
ATG4B-224ENST00000494132 C8orf86Q6ZUL3 223 aa11.55□□□□□ -0.56
ATG4B-224ENST00000494132 ZNF383Q8NA42 475 aa11.55□□□□□ -0.56
ATG4B-224ENST00000494132 DUX3Q96PT4 197 aa11.55□□□□□ -0.56
ATG4B-224ENST00000494132 PARP11Q9NR21 331 aa11.55□□□□□ -0.56
ATG4B-224ENST00000494132 KIAA1456Q9P272 454 aa11.55□□□□□ -0.56
ATG4B-224ENST00000494132 WASHC3Q9Y3C0 194 aa11.55□□□□□ -0.56
ATG4B-224ENST00000494132 WSB1Q9Y6I7 421 aa11.55□□□□□ -0.56
ATG4B-224ENST00000494132 TRAV18A0A075B6X5 111 aa11.54□□□□□ -0.56
ATG4B-224ENST00000494132 G3V318 75 aa11.54□□□□□ -0.56
ATG4B-224ENST00000494132 ATP6V0E1O15342 81 aa11.54□□□□□ -0.56
ATG4B-224ENST00000494132 RRP9O43818 475 aaKnown RBP11.54□□□□□ -0.56
ATG4B-224ENST00000494132 SSX5O60225 188 aa11.54□□□□□ -0.56
ATG4B-224ENST00000494132 FCER2P06734 321 aa11.54□□□□□ -0.56
ATG4B-224ENST00000494132 CD33P20138 364 aa11.54□□□□□ -0.56
ATG4B-224ENST00000494132 SERPINB10P48595 397 aa11.54□□□□□ -0.56
ATG4B-224ENST00000494132 GNG2P59768 71 aa11.54□□□□□ -0.56
ATG4B-224ENST00000494132 NDPQ00604 133 aa11.54□□□□□ -0.56
ATG4B-224ENST00000494132 C5orf64Q2M2E5 130 aa11.54□□□□□ -0.56
ATG4B-224ENST00000494132 TIMM50Q3ZCQ8 353 aa11.54□□□□□ -0.56
ATG4B-224ENST00000494132 SAMD5Q5TGI4 173 aa11.54□□□□□ -0.56
ATG4B-224ENST00000494132 KLHL30-AS1Q8NEE0 82 aa11.54□□□□□ -0.56
ATG4B-224ENST00000494132 OR5AN1Q8NGI8 311 aa11.54□□□□□ -0.56
ATG4B-224ENST00000494132 CLCC1Q96S66 551 aa11.54□□□□□ -0.56
ATG4B-224ENST00000494132 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.54□□□□□ -0.56
ATG4B-224ENST00000494132 SDHAF2Q9NX18 166 aa11.54□□□□□ -0.56
ATG4B-224ENST00000494132 RBM7Q9Y580 266 aaKnown RBP11.54□□□□□ -0.56
ATG4B-224ENST00000494132 IGHV7-81A0A0B4J1V7 117 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 NDUFA3O95167 84 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 HLA-DRB1P01911 266 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 IGKV1-16P04430 117 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 TFAP2AP05549 437 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 IGLL1P15814 213 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 VDAC1P21796 283 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 DTYMKP23919 212 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 RPS19P39019 145 aaKnown RBP11.53□□□□□ -0.56
ATG4B-224ENST00000494132 NCS1P62166 190 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 ARL6IP1Q15041 203 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 PLGLAQ15195 96 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 PNLIPRP3Q17RR3 467 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 BEAN1Q3B7T3 259 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 LIN54Q6MZP7 749 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 TEX38Q6PEX7 206 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 ETV3LQ6ZN32 361 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 H1FOOQ8IZA3 346 aaPredicted RBP11.53□□□□□ -0.56
ATG4B-224ENST00000494132 NPBQ8NG41 125 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 TOLLIPQ9H0E2 274 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 OR51J1Q9H342 316 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 FBXO7Q9Y3I1 522 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 ETV7Q9Y603 341 aa11.53□□□□□ -0.56
ATG4B-224ENST00000494132 TNCP24821 2201 aa11.52□□□□□ -0.56
ATG4B-224ENST00000494132 FCN1O00602 326 aa11.52□□□□□ -0.57
ATG4B-224ENST00000494132 RRHO14718 337 aa11.52□□□□□ -0.57
ATG4B-224ENST00000494132 SMIM18P0DKX4 95 aa11.52□□□□□ -0.57
ATG4B-224ENST00000494132 NFYAP23511 347 aaPredicted RBP11.52□□□□□ -0.57
ATG4B-224ENST00000494132 MC5RP33032 325 aa11.52□□□□□ -0.57
ATG4B-224ENST00000494132 RPS16P62249 146 aaKnown RBP11.52□□□□□ -0.57
ATG4B-224ENST00000494132 CFHR3Q02985 330 aa11.52□□□□□ -0.57
ATG4B-224ENST00000494132 ECSCRQ19T08 205 aa11.52□□□□□ -0.57
ATG4B-224ENST00000494132 DEFB136Q30KP8 78 aa11.52□□□□□ -0.57
ATG4B-224ENST00000494132 PDLIM3Q53GG5 364 aaPredicted RBP11.52□□□□□ -0.57
ATG4B-224ENST00000494132 Q6ZS49 121 aa11.52□□□□□ -0.57
ATG4B-224ENST00000494132 GVQW1Q8N7I0 195 aa11.52□□□□□ -0.57
ATG4B-224ENST00000494132 ABHD5Q8WTS1 349 aa11.52□□□□□ -0.57
ATG4B-224ENST00000494132 FAM103A1Q9BTL3 118 aaKnown RBP11.52□□□□□ -0.57
ATG4B-224ENST00000494132 FUNDC2Q9BWH2 189 aa11.52□□□□□ -0.57
ATG4B-224ENST00000494132 GHITMQ9H3K2 345 aa11.52□□□□□ -0.57
ATG4B-224ENST00000494132 TPSG1Q9NRR2 321 aa11.52□□□□□ -0.57
ATG4B-224ENST00000494132 SLC35D1Q9NTN3 355 aa11.52□□□□□ -0.57
ATG4B-224ENST00000494132 METTL1Q9UBP6 276 aaKnown RBP11.52□□□□□ -0.57
ATG4B-224ENST00000494132 A3GALT2U3KPV4 340 aa11.52□□□□□ -0.57
ATG4B-224ENST00000494132 MEIS3P1A6NDR6 274 aa11.51□□□□□ -0.57
ATG4B-224ENST00000494132 TRIM64CA6NLI5 447 aa11.51□□□□□ -0.57
ATG4B-224ENST00000494132 SCGNO76038 276 aa11.51□□□□□ -0.57
ATG4B-224ENST00000494132 APOA2P02652 100 aa11.51□□□□□ -0.57
ATG4B-224ENST00000494132 IGF1P05019 195 aa11.51□□□□□ -0.57
ATG4B-224ENST00000494132 VBP1P61758 197 aa11.51□□□□□ -0.57
ATG4B-224ENST00000494132 CXorf66Q5JRM2 361 aaPredicted RBP11.51□□□□□ -0.57
ATG4B-224ENST00000494132 COMMD1Q8N668 190 aa11.51□□□□□ -0.57
ATG4B-224ENST00000494132 CASTOR1Q8WTX7 329 aa11.51□□□□□ -0.57
ATG4B-224ENST00000494132 GON7Q9BXV9 100 aa11.51□□□□□ -0.57
ATG4B-224ENST00000494132 SPATA2Q9UM82 520 aa11.51□□□□□ -0.57
ATG4B-224ENST00000494132 GAB2Q9UQC2 676 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms