RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 CTDSP2O14595 271 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 SSX5O60225 188 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 PTHLHP12272 177 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 NFYAP23511 347 aaPredicted RBP6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 HLA-DMAP28067 261 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 FCGR2CP31995 323 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 VDAC2P45880 294 aaPredicted RBP6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 ZNF137PP52743 207 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 FXYD4P59646 89 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 TAGLNQ01995 201 aaKnown RBP6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 LSAMPQ13449 338 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 DIAPH2-AS1Q14236 149 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 HERPUD1Q15011 391 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 MMDQ15546 238 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 RTL8BQ17RB0 113 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 AWAT1Q58HT5 328 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 RPL39P5Q59GN2 51 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 RNASE12Q5GAN4 147 aaKnown RBP6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 SPANXN2Q5MJ10 180 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 LDLRAD2Q5SZI1 272 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 UTF1Q5T230 341 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 PYHIN1Q6K0P9 492 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 C11orf88Q6PI97 169 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 FAM131AQ6UXB0 335 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 TREML4Q6UXN2 200 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 ZNF833PQ6ZTB9 187 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 LAX1Q8IWV1 398 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 OR8H1Q8NGG4 311 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 SPATA3Q8NHX4 192 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 SECTM1Q8WVN6 248 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 ADTRPQ96IZ2 230 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 MDFIQ99750 246 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 MRPL20Q9BYC9 149 aaKnown RBP6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 IFI27L2Q9H2X8 130 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 PRELID3BQ9Y3B1 194 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 OR2W1Q9Y3N9 320 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 RNF114Q9Y508 228 aa6.53□□□□□ -1.36
TM4SF1-204ENST00000493348 IGKV1-6A0A0C4DH72 117 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 ZNF736B4DX44 427 aaPredicted RBP6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 FGF16O43320 207 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 TUSC2O75896 110 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 PMP2P02689 132 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 RRASP10301 218 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 MDKP21741 143 aaPredicted RBP6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 INPP1P49441 399 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 THBS3P49746 956 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 RPS16P62249 146 aaKnown RBP6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 ABCA11PQ4W5N1 156 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 PYDC2Q56P42 97 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 LPCAT3Q6P1A2 487 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 Q6ZPA2 131 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 Q6ZSV7 163 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 H1FOOQ8IZA3 346 aaPredicted RBP6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 ZNF645Q8N7E2 425 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 POC5Q8NA72 575 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 OR6F1Q8NGZ6 308 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 PIFOQ8TCI5 191 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 ST6GALNAC6Q969X2 333 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 EAF1Q96JC9 268 aaPredicted RBP6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 NABP2Q9BQ15 211 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 TOLLIPQ9H0E2 274 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 SLC35D1Q9NTN3 355 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 TAS2R8Q9NYW2 309 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 WASHC3Q9Y3C0 194 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 MMP24Q9Y5R2 645 aa6.52□□□□□ -1.37
TM4SF1-204ENST00000493348 FBN1P35555 2871 aaKnown RBP6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 IGKV1D-8A0A087WSZ0 117 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 FAM90A9PA6NNJ1 464 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 GABARAPH6UMI1 98 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 CHST1O43916 411 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 TSPAN9O75954 239 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 PPYP01298 95 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 HLA-DQB1P01920 261 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 CSF1P09603 554 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 VSIG10L2P0DP72 767 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 HRH1P35367 487 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 COMPP49747 757 aaPredicted RBP6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 TAS2R19P59542 299 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 SSBP1Q04837 148 aaKnown RBP6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 CATR1Q13166 79 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 RNASE10Q5GAN6 216 aaKnown RBP6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 CCBE1Q6UXH8 406 aaPredicted RBP6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 GLDNQ6ZMI3 551 aaPredicted RBP6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 PDPNQ86YL7 162 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 FOXRED2Q8IWF2 684 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 ODF3L1Q8IXM7 274 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 CMTM1Q8IZ96 169 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 DRAXINQ8NBI3 349 aaPredicted RBP6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 ZBTB34Q8NCN2 500 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 LINC01006Q8NI28 216 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 GPX8Q8TED1 209 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 TCTEX1D2Q8WW35 142 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 GIMAP1Q8WWP7 306 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 CFHR4Q92496 578 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 FLYWCH2Q96CP2 140 aaKnown RBP6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 TSNAXQ99598 290 aaKnown RBP6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 AGMATQ9BSE5 352 aa6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 ZNF2Q9BSG1 426 aaPredicted RBP6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 SLIRPQ9GZT3 109 aaKnown RBP6.51□□□□□ -1.37
TM4SF1-204ENST00000493348 SLC5A7Q9GZV3 580 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms