RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 CNTFRP26992 372 aa8.98□□□□□ -0.97
LRTM1-202ENST00000493075 CRIP2P52943 208 aaPredicted RBP8.98□□□□□ -0.97
LRTM1-202ENST00000493075 MRPS15P82914 257 aaKnown RBP8.98□□□□□ -0.97
LRTM1-202ENST00000493075 HES5Q5TA89 166 aa8.98□□□□□ -0.97
LRTM1-202ENST00000493075 UBE2UQ5VVX9 321 aa8.98□□□□□ -0.97
LRTM1-202ENST00000493075 TMEM65Q6PI78 240 aa8.98□□□□□ -0.97
LRTM1-202ENST00000493075 FAM131AQ6UXB0 335 aa8.98□□□□□ -0.97
LRTM1-202ENST00000493075 LCNL1Q6ZST4 164 aa8.98□□□□□ -0.97
LRTM1-202ENST00000493075 MINDY2Q8NBR6 621 aa8.98□□□□□ -0.97
LRTM1-202ENST00000493075 OR4A4PQ8NGN8 299 aa8.98□□□□□ -0.97
LRTM1-202ENST00000493075 OR10R2Q8NGX6 335 aa8.98□□□□□ -0.97
LRTM1-202ENST00000493075 C4orf3Q8WVX3 66 aa8.98□□□□□ -0.97
LRTM1-202ENST00000493075 RAB3CQ96E17 227 aa8.98□□□□□ -0.97
LRTM1-202ENST00000493075 ABHD14BQ96IU4 210 aa8.98□□□□□ -0.97
LRTM1-202ENST00000493075 UBE2E2Q96LR5 201 aa8.98□□□□□ -0.97
LRTM1-202ENST00000493075 CENPOQ9BU64 300 aa8.98□□□□□ -0.97
LRTM1-202ENST00000493075 PARP12Q9H0J9 701 aaKnown RBP8.98□□□□□ -0.97
LRTM1-202ENST00000493075 ZNF221Q9UK13 617 aa8.98□□□□□ -0.97
LRTM1-202ENST00000493075 WASHC3Q9Y3C0 194 aa8.98□□□□□ -0.97
LRTM1-202ENST00000493075 hCG_2014768A0A024R1R8 64 aa8.97□□□□□ -0.97
LRTM1-202ENST00000493075 TRAV41A0A0B4J266 112 aa8.97□□□□□ -0.97
LRTM1-202ENST00000493075 IGKV1-6A0A0C4DH72 117 aa8.97□□□□□ -0.97
LRTM1-202ENST00000493075 SHISA3A0PJX4 238 aa8.97□□□□□ -0.97
LRTM1-202ENST00000493075 METTL21EPA6NDL7 271 aa8.97□□□□□ -0.97
LRTM1-202ENST00000493075 RAB27BO00194 218 aa8.97□□□□□ -0.97
LRTM1-202ENST00000493075 ATP6V0E1O15342 81 aa8.97□□□□□ -0.97
LRTM1-202ENST00000493075 GSTP1P09211 210 aaKnown RBP8.97□□□□□ -0.97
LRTM1-202ENST00000493075 GADD45AP24522 165 aa8.97□□□□□ -0.97
LRTM1-202ENST00000493075 FGF9P31371 208 aaPredicted RBP8.97□□□□□ -0.97
LRTM1-202ENST00000493075 OR10A3P58181 314 aa8.97□□□□□ -0.97
LRTM1-202ENST00000493075 RUNX1Q01196 453 aa8.97□□□□□ -0.97
LRTM1-202ENST00000493075 KIAA0141Q14154 515 aaPredicted RBP8.97□□□□□ -0.97
LRTM1-202ENST00000493075 ARL6IP1Q15041 203 aa8.97□□□□□ -0.97
LRTM1-202ENST00000493075 SRSF7Q16629 238 aaKnown RBP eCLIP8.97□□□□□ -0.97
LRTM1-202ENST00000493075 SPARTQ8N0X7 666 aa8.97□□□□□ -0.97
LRTM1-202ENST00000493075 ZNF491Q8N8L2 437 aa8.97□□□□□ -0.97
LRTM1-202ENST00000493075 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.97□□□□□ -0.97
LRTM1-202ENST00000493075 OR5M8Q8NGP6 311 aa8.97□□□□□ -0.97
LRTM1-202ENST00000493075 Q9H521 79 aa8.97□□□□□ -0.97
LRTM1-202ENST00000493075 RDH8Q9NYR8 311 aa8.97□□□□□ -0.97
LRTM1-202ENST00000493075 WSB1Q9Y6I7 421 aa8.97□□□□□ -0.97
LRTM1-202ENST00000493075 G3V318 75 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 H7C2Y5 167 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 MFNGO00587 321 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 FABP7O15540 132 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 RAMP3O60896 148 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 HOXD3P31249 432 aaPredicted RBP8.96□□□□□ -0.98
LRTM1-202ENST00000493075 RAB9AP51151 201 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 CX3CL1P78423 397 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 TMEM267Q0VDI3 215 aaPredicted RBP8.96□□□□□ -0.98
LRTM1-202ENST00000493075 PLA2G7Q13093 441 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 FHL3Q13643 280 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 MOGAT2Q3SYC2 334 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 C19orf54Q5BKX5 351 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 GLDNQ6ZMI3 551 aaPredicted RBP8.96□□□□□ -0.98
LRTM1-202ENST00000493075 TCTEX1D1Q8N7M0 179 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 FCGR1BQ92637 280 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 DUX3Q96PT4 197 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 CABLES2Q9BTV7 478 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 KLK15Q9H2R5 256 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 FBXL15Q9H469 300 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 PARP11Q9NR21 331 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 RNF150Q9ULK6 438 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 VSIG4Q9Y279 399 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 NUBP2Q9Y5Y2 271 aa8.96□□□□□ -0.98
LRTM1-202ENST00000493075 TRBV6-7A0A0A0MS04 114 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 WI2-2373I1.2A0A1W2PRP0 233 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 I3L521 148 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 FCN1O00602 326 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 SPDEFO95238 335 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 TFAP2AP05549 437 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 FCGR3AP08637 254 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 EGR2P11161 476 aaPredicted RBP8.95□□□□□ -0.98
LRTM1-202ENST00000493075 HIST1H1DP16402 221 aaKnown RBP8.95□□□□□ -0.98
LRTM1-202ENST00000493075 DGCR2P98153 550 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 DCTN2Q13561 401 aaKnown RBP8.95□□□□□ -0.98
LRTM1-202ENST00000493075 PSG5Q15238 335 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 AKIRIN2Q53H80 203 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 DEFB121Q5J5C9 76 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 C9orf66Q5T8R8 295 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 C22orf42Q6IC83 251 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 ZNF562Q6V9R5 426 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 Q6ZS49 121 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 TPRA1Q86W33 373 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 PDPNQ86YL7 162 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 OR10J5Q8NHC4 309 aa8.95□□□□□ -0.98
LRTM1-202ENST00000493075 TSNAXQ99598 290 aaKnown RBP8.95□□□□□ -0.98
LRTM1-202ENST00000493075 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.95□□□□□ -0.98
LRTM1-202ENST00000493075 NOTOA8MTQ0 251 aa8.94□□□□□ -0.98
LRTM1-202ENST00000493075 APOA2P02652 100 aa8.94□□□□□ -0.98
LRTM1-202ENST00000493075 GSTT2P0CG29 244 aa8.94□□□□□ -0.98
LRTM1-202ENST00000493075 GSTT2BP0CG30 244 aa8.94□□□□□ -0.98
LRTM1-202ENST00000493075 GNB3P16520 340 aa8.94□□□□□ -0.98
LRTM1-202ENST00000493075 LGALS7P47929 136 aa8.94□□□□□ -0.98
LRTM1-202ENST00000493075 RPS16P62249 146 aaKnown RBP8.94□□□□□ -0.98
LRTM1-202ENST00000493075 PLGLAQ15195 96 aa8.94□□□□□ -0.98
LRTM1-202ENST00000493075 DEFB136Q30KP8 78 aa8.94□□□□□ -0.98
LRTM1-202ENST00000493075 PYHIN1Q6K0P9 492 aa8.94□□□□□ -0.98
LRTM1-202ENST00000493075 NR2C2APQ86WQ0 139 aa8.94□□□□□ -0.98
LRTM1-202ENST00000493075 ZNF383Q8NA42 475 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms