RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 SDHAF2Q9NX18 166 aa15.1■□□□□ 0.01
MCF2L-230ENST00000491028 GPR132Q9UNW8 380 aa15.1■□□□□ 0.01
MCF2L-230ENST00000491028 IGHV3OR16-10A0A075B7F0 116 aa15.09■□□□□ 0.01
MCF2L-230ENST00000491028 IGLV2-14P01704 120 aa15.09■□□□□ 0.01
MCF2L-230ENST00000491028 EPHA1P21709 976 aa15.09■□□□□ 0.01
MCF2L-230ENST00000491028 S100GP29377 79 aa15.09■□□□□ 0.01
MCF2L-230ENST00000491028 ZNF816Q0VGE8 651 aaPredicted RBP15.09■□□□□ 0.01
MCF2L-230ENST00000491028 BAMBIQ13145 260 aa15.09■□□□□ 0.01
MCF2L-230ENST00000491028 CCDC144NLQ6NUI1 221 aa15.09■□□□□ 0.01
MCF2L-230ENST00000491028 BRD3OSQ6XYD6 125 aa15.09■□□□□ 0.01
MCF2L-230ENST00000491028 ZNF818PQ6ZRF7 136 aa15.09■□□□□ 0.01
MCF2L-230ENST00000491028 C9orf139Q6ZV77 190 aa15.09■□□□□ 0.01
MCF2L-230ENST00000491028 LHFPL4Q7Z7J7 247 aa15.09■□□□□ 0.01
MCF2L-230ENST00000491028 TGIF2LXQ8IUE1 241 aa15.09■□□□□ 0.01
MCF2L-230ENST00000491028 CMTM1Q8IZ96 169 aa15.09■□□□□ 0.01
MCF2L-230ENST00000491028 C14orf166Q9Y224 244 aaKnown RBP15.09■□□□□ 0.01
MCF2L-230ENST00000491028 GAPDHP04406 335 aaKnown RBP15.08■□□□□ 0
MCF2L-230ENST00000491028 TCRBP04435 133 aa15.08■□□□□ 0
MCF2L-230ENST00000491028 RND3P61587 244 aa15.08■□□□□ 0
MCF2L-230ENST00000491028 ABCA11PQ4W5N1 156 aa15.08■□□□□ 0
MCF2L-230ENST00000491028 RPL39P5Q59GN2 51 aa15.08■□□□□ 0
MCF2L-230ENST00000491028 LDLRAD2Q5SZI1 272 aa15.08■□□□□ 0
MCF2L-230ENST00000491028 OR8H3Q8N146 312 aa15.08■□□□□ 0
MCF2L-230ENST00000491028 DUSP18Q8NEJ0 188 aa15.08■□□□□ 0
MCF2L-230ENST00000491028 RTN4IP1Q8WWV3 396 aaPredicted RBP15.08■□□□□ 0
MCF2L-230ENST00000491028 C5orf30Q96GV9 206 aa15.08■□□□□ 0
MCF2L-230ENST00000491028 MS4A7Q9GZW8 240 aaPredicted RBP15.08■□□□□ 0
MCF2L-230ENST00000491028 VSIG4Q9Y279 399 aa15.08■□□□□ 0
MCF2L-230ENST00000491028 ACANP16112 2415 aa15.08■□□□□ 0
MCF2L-230ENST00000491028 TEP1Q99973 2627 aaKnown RBP15.07■□□□□ 0
MCF2L-230ENST00000491028 M0R1X1 148 aa15.07■□□□□ 0
MCF2L-230ENST00000491028 PROP1O75360 226 aa15.07■□□□□ 0
MCF2L-230ENST00000491028 SRP14P37108 136 aaKnown RBP15.07■□□□□ 0
MCF2L-230ENST00000491028 ARHGDIBP52566 201 aa15.07■□□□□ 0
MCF2L-230ENST00000491028 RGS21Q2M5E4 152 aa15.07■□□□□ 0
MCF2L-230ENST00000491028 ZNF66Q6ZN08 573 aa15.07■□□□□ 0
MCF2L-230ENST00000491028 NRARPQ7Z6K4 114 aa15.07■□□□□ 0
MCF2L-230ENST00000491028 CCDC71LQ8N9Z2 235 aa15.07■□□□□ 0
MCF2L-230ENST00000491028 AJUBAQ96IF1 538 aa15.07■□□□□ 0
MCF2L-230ENST00000491028 ADTRPQ96IZ2 230 aa15.07■□□□□ 0
MCF2L-230ENST00000491028 HSD17B10Q99714 261 aaKnown RBP15.07■□□□□ 0
MCF2L-230ENST00000491028 C20orf85Q9H1P6 137 aa15.07■□□□□ 0
MCF2L-230ENST00000491028 C5orf66Q9H5L9 145 aa15.07■□□□□ 0
MCF2L-230ENST00000491028 OCEL1Q9H607 264 aa15.07■□□□□ 0
MCF2L-230ENST00000491028 SLC2A9Q9NRM0 540 aa15.07■□□□□ 0
MCF2L-230ENST00000491028 NUBP2Q9Y5Y2 271 aa15.07■□□□□ 0
MCF2L-230ENST00000491028 FBP1P09467 338 aa15.06■□□□□ 0
MCF2L-230ENST00000491028 THBS3P49746 956 aa15.06■□□□□ 0
MCF2L-230ENST00000491028 EIF4EBP1Q13541 118 aaPredicted RBP15.06■□□□□ 0
MCF2L-230ENST00000491028 CENPSQ8N2Z9 138 aa15.06■□□□□ 0
MCF2L-230ENST00000491028 RTBDNQ9BSG5 229 aaPredicted RBP15.06■□□□□ 0
MCF2L-230ENST00000491028 CDC42EP3Q9UKI2 254 aa15.06■□□□□ 0
MCF2L-230ENST00000491028 HILPDAQ9Y5L2 63 aa15.06■□□□□ 0
MCF2L-230ENST00000491028 CSPG4Q6UVK1 2322 aa15.06■□□□□ 0
MCF2L-230ENST00000491028 HIVEP1P15822 2718 aa15.05■□□□□ 0
MCF2L-230ENST00000491028 IGHV1-3A0A0C4DH29 117 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 A0A0U1RQK1 487 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 A0A1W2PPI3 338 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 RNF212BA8MTL3 300 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 PI3P19957 117 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 DUTP33316 252 aaKnown RBP15.05■□□□□ -0
MCF2L-230ENST00000491028 REG1BP48304 166 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 PIGPP57054 158 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 TAS2R31P59538 309 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 CATR1Q13166 79 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 SCGB2A2Q13296 93 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 DIAPH2-AS1Q14236 149 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 SSX2Q16385 188 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 PHLDA2Q53GA4 152 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 PLET1Q6UQ28 207 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 IL17RELQ6ZVW7 336 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 NABP2Q9BQ15 211 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 MRPL20Q9BYC9 149 aaKnown RBP15.05■□□□□ -0
MCF2L-230ENST00000491028 GSX1Q9H4S2 264 aaPredicted RBP15.05■□□□□ -0
MCF2L-230ENST00000491028 NUDT15Q9NV35 164 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 FAM96BQ9Y3D0 163 aa15.05■□□□□ -0
MCF2L-230ENST00000491028 ARPC1BO15143 372 aaKnown RBP15.04■□□□□ -0
MCF2L-230ENST00000491028 PGLYRP1O75594 196 aaPredicted RBP15.04■□□□□ -0
MCF2L-230ENST00000491028 RLN1P04808 185 aa15.04■□□□□ -0
MCF2L-230ENST00000491028 RIPPLY3P57055 190 aa15.04■□□□□ -0
MCF2L-230ENST00000491028 TAGLNQ01995 201 aaKnown RBP15.04■□□□□ -0
MCF2L-230ENST00000491028 KCTD9Q7L273 389 aa15.04■□□□□ -0
MCF2L-230ENST00000491028 C17orf50Q8WW18 174 aa15.04■□□□□ -0
MCF2L-230ENST00000491028 MEGF9Q9H1U4 602 aa15.04■□□□□ -0
MCF2L-230ENST00000491028 TNFSF12O43508 249 aa15.03■□□□□ -0
MCF2L-230ENST00000491028 CT45A6P0DMU7 189 aa15.03■□□□□ -0
MCF2L-230ENST00000491028 CT45A5P0DMU8 189 aa15.03■□□□□ -0
MCF2L-230ENST00000491028 CT45A7P0DMV0 189 aa15.03■□□□□ -0
MCF2L-230ENST00000491028 UBE2MP61081 183 aaKnown RBP15.03■□□□□ -0
MCF2L-230ENST00000491028 HABP2Q14520 560 aaPredicted RBP15.03■□□□□ -0
MCF2L-230ENST00000491028 TMED4Q7Z7H5 227 aa15.03■□□□□ -0
MCF2L-230ENST00000491028 TBC1D26Q86UD7 250 aa15.03■□□□□ -0
MCF2L-230ENST00000491028 DYNAPQ8N1N2 210 aa15.03■□□□□ -0
MCF2L-230ENST00000491028 TCTEX1D1Q8N7M0 179 aa15.03■□□□□ -0
MCF2L-230ENST00000491028 TCTEX1D2Q8WW35 142 aa15.03■□□□□ -0
MCF2L-230ENST00000491028 TMEM230Q96A57 120 aa15.03■□□□□ -0
MCF2L-230ENST00000491028 BEX2Q9BXY8 128 aa15.03■□□□□ -0
MCF2L-230ENST00000491028 LIN7CQ9NUP9 197 aaKnown RBP15.03■□□□□ -0
MCF2L-230ENST00000491028 FLVCR2Q9UPI3 526 aa15.03■□□□□ -0
MCF2L-230ENST00000491028 PRELID3BQ9Y3B1 194 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms