RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 DCSTAMPQ9H295 470 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 LINC00527Q9UJ94 153 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 SPATA2Q9UM82 520 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 BOLA1Q9Y3E2 137 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 PLXNB1O43157 2135 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 MEGF8Q7Z7M0 2845 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 TRBV6-7A0A0A0MS04 114 aa10.58□□□□□ -0.71
CCL28-202ENST00000489442 A0A0A6YYH2 397 aa10.58□□□□□ -0.71
CCL28-202ENST00000489442 OR5H14A6NHG9 310 aa10.58□□□□□ -0.71
CCL28-202ENST00000489442 A6NJ64 397 aa10.58□□□□□ -0.71
CCL28-202ENST00000489442 NBR2O15453 112 aa10.58□□□□□ -0.71
CCL28-202ENST00000489442 CT45A6P0DMU7 189 aa10.58□□□□□ -0.71
CCL28-202ENST00000489442 CT45A5P0DMU8 189 aa10.58□□□□□ -0.71
CCL28-202ENST00000489442 CT45A7P0DMV0 189 aa10.58□□□□□ -0.71
CCL28-202ENST00000489442 CD83Q01151 205 aa10.58□□□□□ -0.71
CCL28-202ENST00000489442 C10orf99Q6UWK7 81 aa10.58□□□□□ -0.71
CCL28-202ENST00000489442 Q6ZS49 121 aa10.58□□□□□ -0.71
CCL28-202ENST00000489442 FAM71E2Q8N5Q1 922 aa10.58□□□□□ -0.71
CCL28-202ENST00000489442 DRAXINQ8NBI3 349 aaPredicted RBP10.58□□□□□ -0.71
CCL28-202ENST00000489442 S100A16Q96FQ6 103 aaKnown RBP10.58□□□□□ -0.71
CCL28-202ENST00000489442 GON7Q9BXV9 100 aa10.58□□□□□ -0.71
CCL28-202ENST00000489442 OR2D2Q9H210 308 aa10.58□□□□□ -0.71
CCL28-202ENST00000489442 WASHC3Q9Y3C0 194 aa10.58□□□□□ -0.71
CCL28-202ENST00000489442 TSSC4Q9Y5U2 329 aaPredicted RBP10.58□□□□□ -0.71
CCL28-202ENST00000489442 LINC01548A6NM66 108 aa10.58□□□□□ -0.72
CCL28-202ENST00000489442 M0R1X1 148 aa10.58□□□□□ -0.72
CCL28-202ENST00000489442 APOA2P02652 100 aa10.58□□□□□ -0.72
CCL28-202ENST00000489442 TFAP2AP05549 437 aa10.58□□□□□ -0.72
CCL28-202ENST00000489442 CTXN2P0C2S0 81 aa10.58□□□□□ -0.72
CCL28-202ENST00000489442 PF4V1P10720 104 aa10.58□□□□□ -0.72
CCL28-202ENST00000489442 VBP1P61758 197 aa10.58□□□□□ -0.72
CCL28-202ENST00000489442 PLGLAQ15195 96 aa10.58□□□□□ -0.72
CCL28-202ENST00000489442 STPG2Q8N412 459 aa10.58□□□□□ -0.72
CCL28-202ENST00000489442 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.58□□□□□ -0.72
CCL28-202ENST00000489442 OR13F1Q8NGS4 319 aa10.58□□□□□ -0.72
CCL28-202ENST00000489442 SLC25A38Q96DW6 304 aa10.58□□□□□ -0.72
CCL28-202ENST00000489442 RITA1Q96K30 269 aa10.58□□□□□ -0.72
CCL28-202ENST00000489442 TOLLIPQ9H0E2 274 aa10.58□□□□□ -0.72
CCL28-202ENST00000489442 ZNF107Q9UII5 783 aaPredicted RBP10.58□□□□□ -0.72
CCL28-202ENST00000489442 IGKV1D-8A0A087WSZ0 117 aa10.57□□□□□ -0.72
CCL28-202ENST00000489442 H0YJW9 148 aa10.57□□□□□ -0.72
CCL28-202ENST00000489442 RBBP9O75884 186 aa10.57□□□□□ -0.72
CCL28-202ENST00000489442 CNTFRP26992 372 aa10.57□□□□□ -0.72
CCL28-202ENST00000489442 ARPC4P59998 168 aa10.57□□□□□ -0.72
CCL28-202ENST00000489442 NCS1P62166 190 aa10.57□□□□□ -0.72
CCL28-202ENST00000489442 UBE2NLQ5JXB2 153 aa10.57□□□□□ -0.72
CCL28-202ENST00000489442 LIN54Q6MZP7 749 aa10.57□□□□□ -0.72
CCL28-202ENST00000489442 SAMD12Q8N8I0 201 aa10.57□□□□□ -0.72
CCL28-202ENST00000489442 OR5AN1Q8NGI8 311 aa10.57□□□□□ -0.72
CCL28-202ENST00000489442 SLC25A46Q96AG3 418 aa10.57□□□□□ -0.72
CCL28-202ENST00000489442 MRPS26Q9BYN8 205 aaKnown RBP10.57□□□□□ -0.72
CCL28-202ENST00000489442 J3QRK9 145 aa10.56□□□□□ -0.72
CCL28-202ENST00000489442 SMIM18P0DKX4 95 aa10.56□□□□□ -0.72
CCL28-202ENST00000489442 VDAC1P21796 283 aa10.56□□□□□ -0.72
CCL28-202ENST00000489442 RPS16P62249 146 aaKnown RBP10.56□□□□□ -0.72
CCL28-202ENST00000489442 CBX3Q13185 183 aa10.56□□□□□ -0.72
CCL28-202ENST00000489442 C5orf64Q2M2E5 130 aa10.56□□□□□ -0.72
CCL28-202ENST00000489442 TCTEX1D4Q5JR98 221 aa10.56□□□□□ -0.72
CCL28-202ENST00000489442 TEX38Q6PEX7 206 aa10.56□□□□□ -0.72
CCL28-202ENST00000489442 CNIH2Q6PI25 160 aa10.56□□□□□ -0.72
CCL28-202ENST00000489442 H1FOOQ8IZA3 346 aaPredicted RBP10.56□□□□□ -0.72
CCL28-202ENST00000489442 COMMD1Q8N668 190 aa10.56□□□□□ -0.72
CCL28-202ENST00000489442 NPBQ8NG41 125 aa10.56□□□□□ -0.72
CCL28-202ENST00000489442 HSPB9Q9BQS6 159 aa10.56□□□□□ -0.72
CCL28-202ENST00000489442 ANXA10Q9UJ72 324 aa10.56□□□□□ -0.72
CCL28-202ENST00000489442 ADARB2-AS1A8MUL3 147 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 XRCC3O43542 346 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 SSX5O60225 188 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 PROP1O75360 226 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 PF4P02776 101 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 OR5H8P0DN80 308 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 NFYAP23511 347 aaPredicted RBP10.55□□□□□ -0.72
CCL28-202ENST00000489442 TMEM69Q5SWH9 247 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 GPR107Q5VW38 600 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 GPR141Q7Z602 305 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 PDPNQ86YL7 162 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 ZNF383Q8NA42 475 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 BEST4Q8NFU0 473 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 FLYWCH2Q96CP2 140 aaKnown RBP10.55□□□□□ -0.72
CCL28-202ENST00000489442 KCTD12Q96CX2 325 aaKnown RBP10.55□□□□□ -0.72
CCL28-202ENST00000489442 TSNAXQ99598 290 aaKnown RBP10.55□□□□□ -0.72
CCL28-202ENST00000489442 RNF5Q99942 180 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 FBXL15Q9H469 300 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 AUNIPQ9H7T9 357 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 PARP11Q9NR21 331 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 SLC35D1Q9NTN3 355 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 SDHAF2Q9NX18 166 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 COMMD3Q9UBI1 195 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 GAB2Q9UQC2 676 aa10.55□□□□□ -0.72
CCL28-202ENST00000489442 SMIM31A0A1B0GVY4 71 aa10.54□□□□□ -0.72
CCL28-202ENST00000489442 NUDT19A8MXV4 375 aa10.54□□□□□ -0.72
CCL28-202ENST00000489442 RRHO14718 337 aa10.54□□□□□ -0.72
CCL28-202ENST00000489442 NDUFA3O95167 84 aa10.54□□□□□ -0.72
CCL28-202ENST00000489442 HLA-DRB1P01911 266 aa10.54□□□□□ -0.72
CCL28-202ENST00000489442 CBX5P45973 191 aa10.54□□□□□ -0.72
CCL28-202ENST00000489442 RORCP51449 518 aa10.54□□□□□ -0.72
CCL28-202ENST00000489442 LUMP51884 338 aaPredicted RBP10.54□□□□□ -0.72
CCL28-202ENST00000489442 LINC00205P59089 165 aa10.54□□□□□ -0.72
CCL28-202ENST00000489442 TAGLNQ01995 201 aaKnown RBP10.54□□□□□ -0.72
CCL28-202ENST00000489442 CXorf66Q5JRM2 361 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms