RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 HSD17B13Q7Z5P4 300 aaPredicted RBP4.59□□□□□ -1.67
ATG4A-208ENST00000489247 C5orf24Q7Z6I8 188 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 MOGAT3Q86VF5 341 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 BAP18Q8IXM2 172 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 INTS1Q8N201 2190 aaKnown RBP4.59□□□□□ -1.67
ATG4A-208ENST00000489247 ZNF561Q8N587 486 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 DRAM1Q8N682 238 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 ZNF645Q8N7E2 425 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 DMBX1Q8NFW5 382 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 OR13A1Q8NGR1 328 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 CORO2AQ92828 525 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 C14orf79Q96F83 325 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 WFIKKN1Q96NZ8 548 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 YPEL2Q96QA6 119 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 AGMATQ9BSE5 352 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 TMEM204Q9BSN7 226 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 REG4Q9BYZ8 158 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 RAB9BQ9NP90 201 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 UFSP2Q9NUQ7 469 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 OR6C3Q9NZP0 311 aa4.59□□□□□ -1.67
ATG4A-208ENST00000489247 ERRFI1Q9UJM3 462 aaPredicted RBP4.59□□□□□ -1.67
ATG4A-208ENST00000489247 RCL1Q9Y2P8 373 aaKnown RBP4.59□□□□□ -1.67
ATG4A-208ENST00000489247 UBE2J1Q9Y385 318 aaPredicted RBP4.59□□□□□ -1.67
ATG4A-208ENST00000489247 PIEZO1Q92508 2521 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 SPTBN2O15020 2390 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 A0A1B0GW55 424 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 hCG_1807616A0A1W2PRN6 198 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 NKX2-6A6NCS4 301 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 FAM90A9PA6NNJ1 464 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 A8MXK9 166 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 B9A039 149 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 FAM90A26D6RGX4 464 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 F5H0A9 414 aaPredicted RBP4.58□□□□□ -1.68
ATG4A-208ENST00000489247 LGALS8O00214 317 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 ABCD4O14678 606 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 HSD17B6O14756 317 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 SIGLEC5O15389 551 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 RBFOX2O43251 390 aaKnown RBP eCLIP4.58□□□□□ -1.68
ATG4A-208ENST00000489247 SPINT2O43291 252 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 SPRY3O43610 288 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 JTBO76095 146 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 IGKV1-39P01597 117 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 IGKV1D-39P04432 117 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 FGF2P09038 288 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 OR4A8P0C604 315 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 DUX4L2P0CJ85 424 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 DUX4L3P0CJ86 424 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 DUX4L4P0CJ87 422 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 DUX4L5P0CJ88 424 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 DUX4L6P0CJ89 424 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 DUX4L7P0CJ90 424 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 ZFP36P26651 326 aaKnown RBP4.58□□□□□ -1.68
ATG4A-208ENST00000489247 LOXP28300 417 aaPredicted RBP4.58□□□□□ -1.68
ATG4A-208ENST00000489247 RPL12P30050 165 aaKnown RBP4.58□□□□□ -1.68
ATG4A-208ENST00000489247 CEACAM6P40199 344 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 GABRA2P47869 451 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 GLIPR1P48060 266 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 CEBPDP49716 269 aaPredicted RBP4.58□□□□□ -1.68
ATG4A-208ENST00000489247 ARHGDIBP52566 201 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 LOXL3P58215 753 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 ADORA2A-AS1P86434 159 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 AESQ08117 197 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 SNTB1Q13884 538 aaKnown RBP4.58□□□□□ -1.68
ATG4A-208ENST00000489247 ZNF585BQ52M93 769 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 ZNF695Q8IW36 515 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 FAM219AQ8IW50 185 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 PDZD9Q8IXQ8 264 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 STPG2Q8N412 459 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 UBAC2Q8NBM4 344 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.58□□□□□ -1.68
ATG4A-208ENST00000489247 OR10A7Q8NGE5 316 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 OR52M1Q8NGK5 317 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 OR1L1Q8NH94 360 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 C5orf30Q96GV9 206 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 GAFA1Q96PS6 74 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 HSD17B10Q99714 261 aaKnown RBP4.58□□□□□ -1.68
ATG4A-208ENST00000489247 ZNF471Q9BX82 626 aaPredicted RBP4.58□□□□□ -1.68
ATG4A-208ENST00000489247 PARP12Q9H0J9 701 aaKnown RBP4.58□□□□□ -1.68
ATG4A-208ENST00000489247 HIPK2Q9H2X6 1198 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 ESRP2Q9H6T0 727 aaKnown RBP4.58□□□□□ -1.68
ATG4A-208ENST00000489247 PLEKHF2Q9H8W4 249 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 AURKAIP1Q9NWT8 199 aaPredicted RBP4.58□□□□□ -1.68
ATG4A-208ENST00000489247 GSKIPQ9P0R6 139 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 DUX4Q9UBX2 424 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 OR14J1Q9UGF5 321 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 RNF115Q9Y4L5 304 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 MGAQ8IWI9 3026 aa4.58□□□□□ -1.68
ATG4A-208ENST00000489247 CACNA1AO00555 2505 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 IGF2RP11717 2491 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 TRAV39A0A0B4J263 110 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 TRGV8A0A0C4DH27 118 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 A0A0G2JRQ6 117 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 IGHV3-64DA0A0J9YX35 117 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 KBTBD11-OT1A0A1B0GTJ5 212 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 LOC102723971A0A1B0GUV8 181 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 LRRC30A6NM36 301 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 DIRC3C9JPN6 131 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 E7EQL1 145 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 TMEM178BH3BS89 294 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 HSPA12AO43301 675 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms