RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 ZNF44P15621 663 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 PAX1P15863 534 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 SELEP16581 610 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 IGHV1-2P23083 117 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 CA6P23280 308 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 GNRHRP30968 328 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 CALCRP30988 508 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 NPBWR2P48146 333 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 HOXA1P49639 335 aaPredicted RBP2.37□□□□□ -2.03
CALD1-221ENST00000489019 TNFSF10P50591 281 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 NOVA1P51513 510 aaKnown RBP2.37□□□□□ -2.03
CALD1-221ENST00000489019 IDH3GP51553 393 aaPredicted RBP2.37□□□□□ -2.03
CALD1-221ENST00000489019 PIGPP57054 158 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 FGF12P61328 243 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 GNG3P63215 75 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 EIF5AP63241 154 aaKnown RBP2.37□□□□□ -2.03
CALD1-221ENST00000489019 PNRC1Q12796 327 aaPredicted RBP2.37□□□□□ -2.03
CALD1-221ENST00000489019 GAGE2BQ13066 116 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 ZNF345Q14585 488 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 OR8G1Q15617 311 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 MPV17LQ2QL34 196 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 IAH1Q2TAA2 248 aaPredicted RBP2.37□□□□□ -2.03
CALD1-221ENST00000489019 ANKRD55Q3KP44 614 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 SP6Q3SY56 376 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 GAGE2EQ4V326 116 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 PHLDA2Q53GA4 152 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 NHLRC3Q5JS37 347 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 AADACL3Q5VUY0 350 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 ZNF660Q6AZW8 331 aaPredicted RBP2.37□□□□□ -2.03
CALD1-221ENST00000489019 OR2T2Q6IF00 324 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 GAGE2AQ6NT46 116 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 PRSS54Q6PEW0 395 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 ASCL4Q6XD76 172 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 SIGLEC15Q6ZMC9 328 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 LINC00596Q86U02 117 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 LHFPL1Q86WI0 220 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 ZNF573Q86YE8 665 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 CALHM1Q8IU99 346 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 ZNF695Q8IW36 515 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 SAXO1Q8IYX7 474 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 SLC38A6Q8IZM9 456 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 LGI3Q8N145 548 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 FAM58AQ8N1B3 248 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 GBGT1Q8N5D6 347 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 KCNRGQ8N5I3 272 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 FAM71E2Q8N5Q1 922 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.37□□□□□ -2.03
CALD1-221ENST00000489019 THAP8Q8NA92 274 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 SUMF1Q8NBK3 374 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 RELL2Q8NC24 303 aaPredicted RBP2.37□□□□□ -2.03
CALD1-221ENST00000489019 OR10AD1Q8NGE0 317 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 OR5M9Q8NGP3 310 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 OR1J1Q8NGS3 322 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 ANGPTL6Q8NI99 470 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 RNASE11Q8TAA1 199 aaKnown RBP2.37□□□□□ -2.03
CALD1-221ENST00000489019 SUN5Q8TC36 379 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 HPSE2Q8WWQ2 592 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 RTN4IP1Q8WWV3 396 aaPredicted RBP2.37□□□□□ -2.03
CALD1-221ENST00000489019 RDH5Q92781 318 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 MRGPRFQ96AM1 343 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 PIK3IP1Q96FE7 263 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 WBP1Q96G27 269 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 CYYR1Q96J86 154 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 POM121L2Q96KW2 1035 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 CXorf58Q96LI9 332 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 ASCL2Q99929 193 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 DHRS9Q9BPW9 319 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 ADAT1Q9BUB4 502 aaKnown RBP2.37□□□□□ -2.03
CALD1-221ENST00000489019 SUCNR1Q9BXA5 334 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 C1QTNF6Q9BXI9 259 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 WDR13Q9H1Z4 485 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 NAA60Q9H7X0 242 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 ZDHHC11Q9H8X9 412 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 FN3KRPQ9HA64 309 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 SPACA1Q9HBV2 294 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 FAM212BQ9NTI7 297 aaPredicted RBP2.37□□□□□ -2.03
CALD1-221ENST00000489019 RASL12Q9NYN1 266 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 GAGE2DQ9UEU5 116 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 GLS2Q9UI32 602 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 TRAPPC2LQ9UL33 140 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 POLDIP2Q9Y2S7 368 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 CDH23Q9H251 3354 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 SDK2Q58EX2 2172 aa2.37□□□□□ -2.03
CALD1-221ENST00000489019 SDK1Q7Z5N4 2213 aa2.36□□□□□ -2.03
CALD1-221ENST00000489019 IGLV5-45A0A087WSX0 123 aa2.36□□□□□ -2.03
CALD1-221ENST00000489019 BORCS7-ASMTA0A0B4J1R7 106 aa2.36□□□□□ -2.03
CALD1-221ENST00000489019 KIR2DS1A0A191URI9 304 aa2.36□□□□□ -2.03
CALD1-221ENST00000489019 C3orf85A0A1B0GTC6 90 aa2.36□□□□□ -2.03
CALD1-221ENST00000489019 LRP5LA4QPB2 252 aa2.36□□□□□ -2.03
CALD1-221ENST00000489019 RNF222A6NCQ9 220 aa2.36□□□□□ -2.03
CALD1-221ENST00000489019 ZSCAN5BA6NJL1 495 aa2.36□□□□□ -2.03
CALD1-221ENST00000489019 CEACAM18A8MTB9 384 aa2.36□□□□□ -2.03
CALD1-221ENST00000489019 MPTX1A8MV57 137 aa2.36□□□□□ -2.03
CALD1-221ENST00000489019 TRDCB7Z8K6 153 aa2.36□□□□□ -2.03
CALD1-221ENST00000489019 KRBOX1C9JBD0 128 aa2.36□□□□□ -2.03
CALD1-221ENST00000489019 TEX46H3BTG2 121 aa2.36□□□□□ -2.03
CALD1-221ENST00000489019 J3QT63 122 aa2.36□□□□□ -2.03
CALD1-221ENST00000489019 LGALS8O00214 317 aa2.36□□□□□ -2.03
CALD1-221ENST00000489019 SIRPB1O00241 398 aa2.36□□□□□ -2.03
CALD1-221ENST00000489019 WRBO00258 174 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms