RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 IFITM5A6NNB3 132 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 RBBP9O75884 186 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 GABARAPO95166 117 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 NDUFA3O95167 84 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 RAB6AP20340 208 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 SERPINB10P48595 397 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 KIR2DS1Q14954 304 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 C5orf64Q2M2E5 130 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 C18orf65Q6ZTR6 163 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 NPBQ8NG41 125 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 OR4A4PQ8NGN8 299 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 PTX4Q96A99 478 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 RAB3CQ96E17 227 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 ABHD14BQ96IU4 210 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 P2RX4Q99571 388 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 OR51J1Q9H342 316 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 BATF3Q9NR55 127 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 OR1A1Q9P1Q5 309 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 ZMAT5Q9UDW3 170 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 WASHC3Q9Y3C0 194 aa10.83□□□□□ -0.68
SPTLC1-207ENST00000488921 METTL21EPA6NDL7 271 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 TRDCB7Z8K6 153 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 H7C2Y5 167 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 CCL24O00175 119 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 SCTP09683 121 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 CNTFRP26992 372 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 PSMB8P28062 276 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 OR10A3P58181 314 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 VBP1P61758 197 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 MXD1Q05195 221 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 PLGLAQ15195 96 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 RPL39P5Q59GN2 51 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 PLAC9Q5JTB6 97 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 LIN54Q6MZP7 749 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 OR10R2Q8NGX6 335 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 C4orf3Q8WVX3 66 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 AGMATQ9BSE5 352 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 NAA50Q9GZZ1 169 aaKnown RBP10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 C11orf54Q9H0W9 315 aaPredicted RBP10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 PARP11Q9NR21 331 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 ZNF221Q9UK13 617 aa10.82□□□□□ -0.68
SPTLC1-207ENST00000488921 H0YJW9 148 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 ATP6V0E1O15342 81 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 DIRAS3O95661 229 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 GSTP1P09211 210 aaKnown RBP10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 CT45A6P0DMU7 189 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 CT45A5P0DMU8 189 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 CT45A7P0DMV0 189 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 SDC2P34741 201 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 EGFEM1PQ0D2K5 195 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 ARL6IP1Q15041 203 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 CTF1Q16619 201 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 TMEM65Q6PI78 240 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 CROCCP3Q8IVE0 287 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 OR5AN1Q8NGI8 311 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 ISOC1Q96CN7 298 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 DGCR14Q96DF8 476 aaKnown RBP10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 RBMXL1Q96E39 390 aaKnown RBP10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 RAX2Q96IS3 184 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 RITA1Q96K30 269 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 RNF5Q99942 180 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 PARP12Q9H0J9 701 aaKnown RBP10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 RNF167Q9H6Y7 350 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 RDH8Q9NYR8 311 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 RSL24D1Q9UHA3 163 aaKnown RBP10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 CEPT1Q9Y6K0 416 aa10.81□□□□□ -0.68
SPTLC1-207ENST00000488921 IGHV7-81A0A0B4J1V7 117 aa10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 TRAV41A0A0B4J266 112 aa10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 SHISA3A0PJX4 238 aa10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 DPPA5A6NC42 116 aa10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 MFNGO00587 321 aa10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 RRHO14718 337 aa10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 FABP7O15540 132 aa10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 SPDEFO95238 335 aa10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 APOA2P02652 100 aa10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 FCGR3AP08637 254 aa10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 HIST1H1DP16402 221 aaKnown RBP10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 PPIFP30405 207 aaKnown RBP10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 RAB25P57735 213 aa10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 NCS1P62166 190 aa10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 ZNF660Q6AZW8 331 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 GLDNQ6ZMI3 551 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 LCNL1Q6ZST4 164 aa10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 TCTEX1D1Q8N7M0 179 aa10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 OR5M8Q8NGP6 311 aa10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 CABLES2Q9BTV7 478 aa10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 TOLLIPQ9H0E2 274 aa10.8□□□□□ -0.68
SPTLC1-207ENST00000488921 A0A075B6Q4 140 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 NOTOA8MTQ0 251 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 ZNF701M0R085 212 aaPredicted RBP10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 SCGNO76038 276 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 GNB3P16520 340 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 HOXD3P31249 432 aaPredicted RBP10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 TALDO1P37837 337 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 PLA2G7Q13093 441 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 DCTN2Q13561 401 aaKnown RBP10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 ARFRP1Q13795 201 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 DEFB136Q30KP8 78 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 MOGAT2Q3SYC2 334 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms