RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 SLC6A1P30531 599 aa13.91□□□□□ -0.18
ITGB1-215ENST00000488494 NEDD8Q15843 81 aa13.91□□□□□ -0.18
ITGB1-215ENST00000488494 KCTD21Q4G0X4 260 aa13.91□□□□□ -0.18
ITGB1-215ENST00000488494 IGSF11Q5DX21 431 aa13.91□□□□□ -0.18
ITGB1-215ENST00000488494 DRAXINQ8NBI3 349 aaPredicted RBP13.91□□□□□ -0.18
ITGB1-215ENST00000488494 NPBQ8NG41 125 aa13.91□□□□□ -0.18
ITGB1-215ENST00000488494 DUX3Q96PT4 197 aa13.91□□□□□ -0.18
ITGB1-215ENST00000488494 CHCHD6Q9BRQ6 235 aa13.91□□□□□ -0.18
ITGB1-215ENST00000488494 CABLES2Q9BTV7 478 aa13.91□□□□□ -0.18
ITGB1-215ENST00000488494 OR51E2Q9H255 320 aa13.91□□□□□ -0.18
ITGB1-215ENST00000488494 GHITMQ9H3K2 345 aa13.91□□□□□ -0.18
ITGB1-215ENST00000488494 AURKAIP1Q9NWT8 199 aaPredicted RBP13.91□□□□□ -0.18
ITGB1-215ENST00000488494 ZNF230Q9UIE0 474 aaPredicted RBP13.91□□□□□ -0.18
ITGB1-215ENST00000488494 DAPK2Q9UIK4 370 aa13.91□□□□□ -0.18
ITGB1-215ENST00000488494 ZNF221Q9UK13 617 aa13.91□□□□□ -0.18
ITGB1-215ENST00000488494 IGHV7-81A0A0B4J1V7 117 aa13.9□□□□□ -0.18
ITGB1-215ENST00000488494 ELANEP08246 267 aa13.9□□□□□ -0.18
ITGB1-215ENST00000488494 OR5H8P0DN80 308 aa13.9□□□□□ -0.18
ITGB1-215ENST00000488494 SERPINB10P48595 397 aa13.9□□□□□ -0.18
ITGB1-215ENST00000488494 ARFRP1Q13795 201 aa13.9□□□□□ -0.18
ITGB1-215ENST00000488494 DEFB136Q30KP8 78 aa13.9□□□□□ -0.18
ITGB1-215ENST00000488494 TPRA1Q86W33 373 aa13.9□□□□□ -0.18
ITGB1-215ENST00000488494 RNF152Q8N8N0 203 aa13.9□□□□□ -0.18
ITGB1-215ENST00000488494 OR5AN1Q8NGI8 311 aa13.9□□□□□ -0.18
ITGB1-215ENST00000488494 LGALS14Q8TCE9 139 aa13.9□□□□□ -0.18
ITGB1-215ENST00000488494 OR51J1Q9H342 316 aa13.9□□□□□ -0.18
ITGB1-215ENST00000488494 WSB1Q9Y6I7 421 aa13.9□□□□□ -0.18
ITGB1-215ENST00000488494 LOC100506127A0A0U1RQW1 187 aa13.89□□□□□ -0.19
ITGB1-215ENST00000488494 G3V318 75 aa13.89□□□□□ -0.19
ITGB1-215ENST00000488494 RRHO14718 337 aa13.89□□□□□ -0.19
ITGB1-215ENST00000488494 GSTP1P09211 210 aaKnown RBP13.89□□□□□ -0.19
ITGB1-215ENST00000488494 SNRPBP14678 240 aaKnown RBP13.89□□□□□ -0.19
ITGB1-215ENST00000488494 MC5RP33032 325 aa13.89□□□□□ -0.19
ITGB1-215ENST00000488494 NDPQ00604 133 aa13.89□□□□□ -0.19
ITGB1-215ENST00000488494 PLGLAQ15195 96 aa13.89□□□□□ -0.19
ITGB1-215ENST00000488494 LIN54Q6MZP7 749 aa13.89□□□□□ -0.19
ITGB1-215ENST00000488494 SFXN4Q6P4A7 337 aa13.89□□□□□ -0.19
ITGB1-215ENST00000488494 OR10J5Q8NHC4 309 aa13.89□□□□□ -0.19
ITGB1-215ENST00000488494 RAX2Q96IS3 184 aa13.89□□□□□ -0.19
ITGB1-215ENST00000488494 OR2D2Q9H210 308 aa13.89□□□□□ -0.19
ITGB1-215ENST00000488494 FBXL15Q9H469 300 aa13.89□□□□□ -0.19
ITGB1-215ENST00000488494 RNF167Q9H6Y7 350 aa13.89□□□□□ -0.19
ITGB1-215ENST00000488494 ELF5Q9UKW6 265 aaPredicted RBP13.89□□□□□ -0.19
ITGB1-215ENST00000488494 TRAV41A0A0B4J266 112 aa13.88□□□□□ -0.19
ITGB1-215ENST00000488494 M0R1X1 148 aa13.88□□□□□ -0.19
ITGB1-215ENST00000488494 PROP1O75360 226 aa13.88□□□□□ -0.19
ITGB1-215ENST00000488494 RBBP9O75884 186 aa13.88□□□□□ -0.19
ITGB1-215ENST00000488494 DUS4LO95620 317 aaKnown RBP13.88□□□□□ -0.19
ITGB1-215ENST00000488494 TFAP2AP05549 437 aa13.88□□□□□ -0.19
ITGB1-215ENST00000488494 GSTT2P0CG29 244 aa13.88□□□□□ -0.19
ITGB1-215ENST00000488494 GSTT2BP0CG30 244 aa13.88□□□□□ -0.19
ITGB1-215ENST00000488494 PSMB8P28062 276 aa13.88□□□□□ -0.19
ITGB1-215ENST00000488494 SDC2P34741 201 aa13.88□□□□□ -0.19
ITGB1-215ENST00000488494 TALDO1P37837 337 aa13.88□□□□□ -0.19
ITGB1-215ENST00000488494 MYCNOSP40205 109 aa13.88□□□□□ -0.19
ITGB1-215ENST00000488494 RAB25P57735 213 aa13.88□□□□□ -0.19
ITGB1-215ENST00000488494 LINC00205P59089 165 aa13.88□□□□□ -0.19
ITGB1-215ENST00000488494 MXD1Q05195 221 aa13.88□□□□□ -0.19
ITGB1-215ENST00000488494 ZNF383Q8NA42 475 aa13.88□□□□□ -0.19
ITGB1-215ENST00000488494 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.88□□□□□ -0.19
ITGB1-215ENST00000488494 MRAPQ8TCY5 172 aa13.88□□□□□ -0.19
ITGB1-215ENST00000488494 P2RX4Q99571 388 aa13.88□□□□□ -0.19
ITGB1-215ENST00000488494 TRBV6-7A0A0A0MS04 114 aa13.87□□□□□ -0.19
ITGB1-215ENST00000488494 DIRAS3O95661 229 aa13.87□□□□□ -0.19
ITGB1-215ENST00000488494 APOA2P02652 100 aa13.87□□□□□ -0.19
ITGB1-215ENST00000488494 IGKV1-16P04430 117 aa13.87□□□□□ -0.19
ITGB1-215ENST00000488494 CLEC2LP0C7M8 214 aa13.87□□□□□ -0.19
ITGB1-215ENST00000488494 CD36P16671 472 aa13.87□□□□□ -0.19
ITGB1-215ENST00000488494 ARL6IP1Q15041 203 aa13.87□□□□□ -0.19
ITGB1-215ENST00000488494 ECSCRQ19T08 205 aa13.87□□□□□ -0.19
ITGB1-215ENST00000488494 OR8U1Q8NH10 309 aa13.87□□□□□ -0.19
ITGB1-215ENST00000488494 GINS4Q9BRT9 223 aa13.87□□□□□ -0.19
ITGB1-215ENST00000488494 TOLLIPQ9H0E2 274 aa13.87□□□□□ -0.19
ITGB1-215ENST00000488494 FBXO7Q9Y3I1 522 aa13.87□□□□□ -0.19
ITGB1-215ENST00000488494 IGKV1D-8A0A087WSZ0 117 aa13.86□□□□□ -0.19
ITGB1-215ENST00000488494 CCL24O00175 119 aa13.86□□□□□ -0.19
ITGB1-215ENST00000488494 OR8U9P0C7N5 309 aa13.86□□□□□ -0.19
ITGB1-215ENST00000488494 DTYMKP23919 212 aa13.86□□□□□ -0.19
ITGB1-215ENST00000488494 HOXD3P31249 432 aaPredicted RBP13.86□□□□□ -0.19
ITGB1-215ENST00000488494 CDX1P47902 265 aaPredicted RBP13.86□□□□□ -0.19
ITGB1-215ENST00000488494 CDNFQ49AH0 187 aa13.86□□□□□ -0.19
ITGB1-215ENST00000488494 PDPNQ86YL7 162 aa13.86□□□□□ -0.19
ITGB1-215ENST00000488494 MYOZ3Q8TDC0 251 aa13.86□□□□□ -0.19
ITGB1-215ENST00000488494 ABHD5Q8WTS1 349 aa13.86□□□□□ -0.19
ITGB1-215ENST00000488494 NUDCD2Q8WVJ2 157 aa13.86□□□□□ -0.19
ITGB1-215ENST00000488494 C4orf3Q8WVX3 66 aa13.86□□□□□ -0.19
ITGB1-215ENST00000488494 C5orf30Q96GV9 206 aa13.86□□□□□ -0.19
ITGB1-215ENST00000488494 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.86□□□□□ -0.19
ITGB1-215ENST00000488494 METTL1Q9UBP6 276 aaKnown RBP13.86□□□□□ -0.19
ITGB1-215ENST00000488494 A3GALT2U3KPV4 340 aa13.86□□□□□ -0.19
ITGB1-215ENST00000488494 TMEM235A6NFC5 223 aa13.85□□□□□ -0.19
ITGB1-215ENST00000488494 SPDEFO95238 335 aa13.85□□□□□ -0.19
ITGB1-215ENST00000488494 PPIFP30405 207 aaKnown RBP13.85□□□□□ -0.19
ITGB1-215ENST00000488494 CX3CL1P78423 397 aa13.85□□□□□ -0.19
ITGB1-215ENST00000488494 PSG5Q15238 335 aa13.85□□□□□ -0.19
ITGB1-215ENST00000488494 HACD4Q5VWC8 232 aa13.85□□□□□ -0.19
ITGB1-215ENST00000488494 TMEM65Q6PI78 240 aa13.85□□□□□ -0.19
ITGB1-215ENST00000488494 Q6ZS49 121 aa13.85□□□□□ -0.19
ITGB1-215ENST00000488494 DPF1Q92782 380 aa13.85□□□□□ -0.19
ITGB1-215ENST00000488494 TSNAXQ99598 290 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms