RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 NKX6-2Q9C056 277 aaPredicted RBP1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 MED28Q9H204 178 aa1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 SLC38A1Q9H2H9 487 aa1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 MIXL1Q9H2W2 232 aa1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 DHX35Q9H5Z1 703 aaKnown RBP1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 CACYBPQ9HB71 228 aaKnown RBP1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 SND1-IT1Q9HBX3 110 aa1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 TMEM138Q9NPI0 162 aa1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 COA4Q9NYJ1 87 aa1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 VAPAQ9P0L0 249 aa1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 SLC22A14Q9Y267 594 aa1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 PCYT1BQ9Y5K3 369 aaPredicted RBP1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 A2MP01023 1474 aa1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 LAMA4Q16363 1823 aa1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 TAF1LQ8IZX4 1826 aa1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 MROH2AA6NES4 1674 aa1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 CCDC88AQ3V6T2 1871 aa1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 ABCC1P33527 1531 aa1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 AGLP35573 1532 aa1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 ZFYVE16Q7Z3T8 1539 aa1.86□□□□□ -2.11
SNRNP27-204ENST00000487029 UGGT1Q9NYU2 1555 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 DISP2A7MBM2 1401 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 DCCP43146 1447 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 PREX2Q70Z35 1606 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 SIPA1L1O43166 1804 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 ATAD5Q96QE3 1844 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 SLC5A10A0PJK1 596 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 BBIP1A8MTZ0 92 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 EFCAB9A8MZ26 197 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 C5orf58C9J3I9 102 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 D6RAR5 112 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 CLDN34H7C241 214 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 M0QYV0 167 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 AIPO00170 330 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 UPK1AO00322 258 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 GPR171O14626 319 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 TGOLN2O43493 480 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 CNMDO75829 334 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 SC5DO75845 299 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 APOC3P02656 99 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 METTL15P1P0C7V9 234 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 PRPS1L1P21108 318 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 RPS3P23396 243 aaKnown RBP eCLIP1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 G0S2P27469 103 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 CASP1P29466 404 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 ACTR1BP42025 376 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 CDKN2CP42773 168 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 TGM4P49221 684 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 AP3S2P59780 193 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 NCS1P62166 190 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 TFAMQ00059 246 aaKnown RBP1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 MGAT3Q09327 533 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 FAM53BQ14153 422 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 HMGN3Q15651 99 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 LINC00303Q3SY05 128 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 AKIRIN2Q53H80 203 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 APOBEC3HQ6NTF7 200 aaKnown RBP1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 FAM231DQ6ZW35 169 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 DAZ4Q86SG3 579 aaKnown RBP1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 GID4Q8IVV7 300 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 ACBD4Q8NC06 268 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 OR4K2Q8NGD2 314 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 OR2D3Q8NGH3 330 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 FAM57AQ8TBR7 257 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 DOK4Q8TEW6 326 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 ASB13Q8WXK3 278 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 ADTRPQ96IZ2 230 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 SMIM8Q96KF7 97 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 DERL3Q96Q80 235 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 S100A13Q99584 98 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 PHB2Q99623 299 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 HOPXQ9BPY8 73 aaPredicted RBP1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 DERL2Q9GZP9 239 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 DCSTAMPQ9H295 470 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 OR51B6Q9H340 312 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 PRORYQ9H606 182 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 DAZ1Q9NQZ3 744 aaKnown RBP1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 NLE1Q9NVX2 485 aaPredicted RBP1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 TMEM216Q9P0N5 145 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 ANXA10Q9UJ72 324 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 C3orf18Q9UK00 162 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 GNG8Q9UK08 70 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 NUBP2Q9Y5Y2 271 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 SLC22A7Q9Y694 548 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 CLTCQ00610 1675 aaKnown RBP1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 DLC1Q96QB1 1528 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 NRKQ7Z2Y5 1582 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 SETBP1Q9Y6X0 1596 aa1.85□□□□□ -2.11
SNRNP27-204ENST00000487029 MAP2P11137 1827 aaKnown RBP1.84□□□□□ -2.11
SNRNP27-204ENST00000487029 ZCCHC11Q5TAX3 1644 aaKnown RBP1.84□□□□□ -2.11
SNRNP27-204ENST00000487029 CRB1P82279 1406 aa1.84□□□□□ -2.11
SNRNP27-204ENST00000487029 CDK5RAP2Q96SN8 1893 aa1.84□□□□□ -2.11
SNRNP27-204ENST00000487029 KIF1AQ12756 1690 aa1.84□□□□□ -2.11
SNRNP27-204ENST00000487029 SIGLEC1Q9BZZ2 1709 aa1.84□□□□□ -2.11
SNRNP27-204ENST00000487029 A0A1B0GV72 72 aa1.84□□□□□ -2.11
SNRNP27-204ENST00000487029 DHRS12A0PJE2 317 aa1.84□□□□□ -2.11
SNRNP27-204ENST00000487029 TMEM218A2RU14 115 aa1.84□□□□□ -2.11
SNRNP27-204ENST00000487029 DISC1C4P0D8 188 aa1.84□□□□□ -2.11
SNRNP27-204ENST00000487029 C9JQL5 133 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms