RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 NABP2Q9BQ15 211 aa9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 ZNF251Q9BRH9 671 aa9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 MRPL20Q9BYC9 149 aaKnown RBP9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 PARP12Q9H0J9 701 aaKnown RBP9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 AUNIPQ9H7T9 357 aa9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 COMMD3Q9UBI1 195 aa9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 RNF150Q9ULK6 438 aa9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 GAB2Q9UQC2 676 aa9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 RBM7Q9Y580 266 aaKnown RBP9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 TENM3Q9P273 2699 aa9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 KMT2CQ8NEZ4 4911 aaKnown RBP9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 IGKV1D-8A0A087WSZ0 117 aa9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 SSX5O60225 188 aa9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 APOA1P02647 267 aa9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 OR8U9P0C7N5 309 aa9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 ZNF182P17025 639 aaPredicted RBP9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 CBX5P45973 191 aa9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 GPR12P47775 334 aa9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 RPL39P5Q59GN2 51 aa9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 C9orf152Q5JTZ5 239 aa9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 TMEM69Q5SWH9 247 aa9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 CNIH2Q6PI25 160 aa9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 CENPVQ7Z7K6 275 aaPredicted RBP9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 CLVS1Q8IUQ0 354 aaPredicted RBP9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 WFDC9Q8NEX5 89 aa9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 OR8U1Q8NH10 309 aa9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 WNT10AQ9GZT5 417 aa9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 PLSCR3Q9NRY6 295 aa9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 ANXA10Q9UJ72 324 aa9.51□□□□□ -0.89
HLA-DOA-204ENST00000485901 SH2D7A6NKC9 451 aaPredicted RBP9.5□□□□□ -0.89
HLA-DOA-204ENST00000485901 CT45A6P0DMU7 189 aa9.5□□□□□ -0.89
HLA-DOA-204ENST00000485901 CT45A5P0DMU8 189 aa9.5□□□□□ -0.89
HLA-DOA-204ENST00000485901 CT45A7P0DMV0 189 aa9.5□□□□□ -0.89
HLA-DOA-204ENST00000485901 TMBIM6P55061 237 aa9.5□□□□□ -0.89
HLA-DOA-204ENST00000485901 VAX1Q5SQQ9 334 aa9.5□□□□□ -0.89
HLA-DOA-204ENST00000485901 HOGA1Q86XE5 327 aa9.5□□□□□ -0.89
HLA-DOA-204ENST00000485901 H1FOOQ8IZA3 346 aaPredicted RBP9.5□□□□□ -0.89
HLA-DOA-204ENST00000485901 Q8N9W7 124 aa9.5□□□□□ -0.89
HLA-DOA-204ENST00000485901 BEST4Q8NFU0 473 aa9.5□□□□□ -0.89
HLA-DOA-204ENST00000485901 RAB2BQ8WUD1 216 aa9.5□□□□□ -0.89
HLA-DOA-204ENST00000485901 RASL11BQ9BPW5 248 aa9.5□□□□□ -0.89
HLA-DOA-204ENST00000485901 BCL7BQ9BQE9 202 aa9.5□□□□□ -0.89
HLA-DOA-204ENST00000485901 LIN7CQ9NUP9 197 aaKnown RBP9.5□□□□□ -0.89
HLA-DOA-204ENST00000485901 SCOCQ9UIL1 159 aa9.5□□□□□ -0.89
HLA-DOA-204ENST00000485901 OR5H14A6NHG9 310 aa9.49□□□□□ -0.89
HLA-DOA-204ENST00000485901 PROP1O75360 226 aa9.49□□□□□ -0.89
HLA-DOA-204ENST00000485901 FBXO24O75426 580 aa9.49□□□□□ -0.89
HLA-DOA-204ENST00000485901 DUS4LO95620 317 aaKnown RBP9.49□□□□□ -0.89
HLA-DOA-204ENST00000485901 SOX6P35712 828 aa9.49□□□□□ -0.89
HLA-DOA-204ENST00000485901 F2RL1P55085 397 aa9.49□□□□□ -0.89
HLA-DOA-204ENST00000485901 TAS2R20P59543 309 aa9.49□□□□□ -0.89
HLA-DOA-204ENST00000485901 ARPC4P59998 168 aa9.49□□□□□ -0.89
HLA-DOA-204ENST00000485901 ACTBP60709 375 aa9.49□□□□□ -0.89
HLA-DOA-204ENST00000485901 OR5AN1Q8NGI8 311 aa9.49□□□□□ -0.89
HLA-DOA-204ENST00000485901 WIPF2Q8TF74 440 aaPredicted RBP9.49□□□□□ -0.89
HLA-DOA-204ENST00000485901 RNF5Q99942 180 aa9.49□□□□□ -0.89
HLA-DOA-204ENST00000485901 OR2D2Q9H210 308 aa9.49□□□□□ -0.89
HLA-DOA-204ENST00000485901 WASHC3Q9Y3C0 194 aa9.49□□□□□ -0.89
HLA-DOA-204ENST00000485901 OR2W1Q9Y3N9 320 aa9.49□□□□□ -0.89
HLA-DOA-204ENST00000485901 COL7A1Q02388 2944 aa9.49□□□□□ -0.89
HLA-DOA-204ENST00000485901 H0YJW9 148 aa9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 H7C2Y5 167 aa9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 M0R1X1 148 aa9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 HPGDSO60760 199 aa9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 NOL3O60936 208 aaKnown RBP9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 RBBP9O75884 186 aa9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 EIF4EP06730 217 aaKnown RBP9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 PTHLHP12272 177 aa9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 PRSS3P35030 304 aa9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 LUMP51884 338 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 MMDQ15546 238 aa9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 TMEM95Q3KNT9 176 aa9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 FAM131AQ6UXB0 335 aa9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 GLDNQ6ZMI3 551 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 SLC35E3Q7Z769 313 aa9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 FOXRED2Q8IWF2 684 aa9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 GVQW1Q8N7I0 195 aa9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 DRAXINQ8NBI3 349 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 OR5AU1Q8NGC0 362 aa9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 IFT46Q9NQC8 304 aa9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 AURKAIP1Q9NWT8 199 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 SDHAF2Q9NX18 166 aa9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 MRPS7Q9Y2R9 242 aaKnown RBP9.48□□□□□ -0.89
HLA-DOA-204ENST00000485901 FAM25AB3EWG3 89 aa9.47□□□□□ -0.89
HLA-DOA-204ENST00000485901 FAM25CB3EWG5 89 aa9.47□□□□□ -0.89
HLA-DOA-204ENST00000485901 FAM25GB3EWG6 89 aa9.47□□□□□ -0.89
HLA-DOA-204ENST00000485901 SLC22A5O76082 557 aa9.47□□□□□ -0.89
HLA-DOA-204ENST00000485901 IGHG2P01859 326 aa9.47□□□□□ -0.89
HLA-DOA-204ENST00000485901 HLA-DQB1P01920 261 aa9.47□□□□□ -0.89
HLA-DOA-204ENST00000485901 APOA2P02652 100 aa9.47□□□□□ -0.89
HLA-DOA-204ENST00000485901 ELK1P19419 428 aa9.47□□□□□ -0.89
HLA-DOA-204ENST00000485901 NFYAP23511 347 aaPredicted RBP9.47□□□□□ -0.89
HLA-DOA-204ENST00000485901 TAGLNQ01995 201 aaKnown RBP9.47□□□□□ -0.89
HLA-DOA-204ENST00000485901 DCTN2Q13561 401 aaKnown RBP9.47□□□□□ -0.89
HLA-DOA-204ENST00000485901 SPCS2Q15005 226 aa9.47□□□□□ -0.89
HLA-DOA-204ENST00000485901 OXLD1Q5BKU9 147 aa9.47□□□□□ -0.89
HLA-DOA-204ENST00000485901 FAM71E2Q8N5Q1 922 aa9.47□□□□□ -0.89
HLA-DOA-204ENST00000485901 C11orf44Q8N8P7 122 aa9.47□□□□□ -0.89
HLA-DOA-204ENST00000485901 NPBQ8NG41 125 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms