RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 C5orf64Q2M2E5 130 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 SLC22A6Q4U2R8 563 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 LIN54Q6MZP7 749 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 ODF3L1Q8IXM7 274 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 TCTEX1D1Q8N7M0 179 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 OR6Q1Q8NGQ2 317 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 NEK7Q8TDX7 302 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 DLX4Q92988 240 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-227ENST00000485102 CENPOQ9BU64 300 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 TOLLIPQ9H0E2 274 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 GHITMQ9H3K2 345 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 ABRACLQ9P1F3 81 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 RAB22AQ9UL26 194 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 AK6Q9Y3D8 172 aaKnown RBP10.06□□□□□ -0.8
HDAC6-227ENST00000485102 ETV7Q9Y603 341 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 A0A1W2PP11 408 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 LINC01619G3V211 115 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 NBR2O15453 112 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 SAP30O75446 220 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 CRTAPO75718 401 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-227ENST00000485102 SDC2P34741 201 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 HTD2P86397 168 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 INSL4Q14641 139 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 GPR107Q5VW38 600 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 ZNF660Q6AZW8 331 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-227ENST00000485102 RAB12Q6IQ22 244 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 SFXN4Q6P4A7 337 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 MZT2AQ6P582 158 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 OVCH2Q7RTZ1 564 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 LYPD6Q86Y78 171 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 CLVS1Q8IUQ0 354 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-227ENST00000485102 OR1L1Q8NH94 360 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 FAM3DQ96BQ1 224 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 RITA1Q96K30 269 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 CMTM3Q96MX0 182 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 NABP2Q9BQ15 211 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 ZNF251Q9BRH9 671 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 TMEM59Q9BXS4 323 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 EDA2RQ9HAV5 297 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 OR2S2Q9NQN1 319 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 ETAA1Q9NY74 926 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 JPT1Q9UK76 154 aa10.05□□□□□ -0.8
HDAC6-227ENST00000485102 A0A0A6YYH2 397 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 A6NJ64 397 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 LDLRAD4O15165 306 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 SOX15O60248 233 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 YPEL1O60688 119 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 LGALS1P09382 135 aaKnown RBP10.04□□□□□ -0.8
HDAC6-227ENST00000485102 OR8U9P0C7N5 309 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 MGMTP16455 207 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 RCC1P18754 421 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-227ENST00000485102 BLVRBP30043 206 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-227ENST00000485102 SERPINB10P48595 397 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 VEGFCP49767 419 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 ZNF833PQ6ZTB9 187 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 OR56B1Q8NGI3 324 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 OR10V1Q8NGI7 309 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 OR4K15Q8NH41 348 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 SLC25A46Q96AG3 418 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 RBMXL1Q96E39 390 aaKnown RBP10.04□□□□□ -0.8
HDAC6-227ENST00000485102 NEDD4LQ96PU5 975 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 YPEL2Q96QA6 119 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 OR5B12Q96R08 314 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 ABHD14AQ9BUJ0 271 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 TAF9BQ9HBM6 251 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 PALMDQ9NP74 551 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 PARP11Q9NR21 331 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 BATF3Q9NR55 127 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 NUBP2Q9Y5Y2 271 aa10.04□□□□□ -0.8
HDAC6-227ENST00000485102 CCDC160A6NGH7 325 aa10.03□□□□□ -0.8
HDAC6-227ENST00000485102 FUT3P21217 361 aa10.03□□□□□ -0.8
HDAC6-227ENST00000485102 CNTFRP26992 372 aa10.03□□□□□ -0.8
HDAC6-227ENST00000485102 PYHIN1Q6K0P9 492 aa10.03□□□□□ -0.8
HDAC6-227ENST00000485102 FAM71F2Q6NXP2 309 aa10.03□□□□□ -0.8
HDAC6-227ENST00000485102 Q8N1Y9 231 aa10.03□□□□□ -0.8
HDAC6-227ENST00000485102 ORAI1Q96D31 301 aa10.03□□□□□ -0.8
HDAC6-227ENST00000485102 TM2D1Q9BX74 207 aa10.03□□□□□ -0.8
HDAC6-227ENST00000485102 SELENOIQ9C0D9 397 aa10.03□□□□□ -0.8
HDAC6-227ENST00000485102 RIMS4Q9H426 269 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-227ENST00000485102 C19orf73Q9NVV2 129 aa10.03□□□□□ -0.8
HDAC6-227ENST00000485102 KCNIP1Q9NZI2 227 aa10.03□□□□□ -0.8
HDAC6-227ENST00000485102 RABL2AQ9UBK7 228 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-227ENST00000485102 MGAT4AQ9UM21 535 aa10.03□□□□□ -0.8
HDAC6-227ENST00000485102 RABL2BQ9UNT1 228 aa10.03□□□□□ -0.8
HDAC6-227ENST00000485102 FOXA2Q9Y261 457 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-227ENST00000485102 PEX16Q9Y5Y5 336 aa10.03□□□□□ -0.8
HDAC6-227ENST00000485102 TMEM14DPA8MWL7 114 aa10.02□□□□□ -0.81
HDAC6-227ENST00000485102 RGS11O94810 467 aa10.02□□□□□ -0.81
HDAC6-227ENST00000485102 HSPB1P04792 205 aaKnown RBP10.02□□□□□ -0.81
HDAC6-227ENST00000485102 EGR2P11161 476 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-227ENST00000485102 SLURP1P55000 103 aa10.02□□□□□ -0.81
HDAC6-227ENST00000485102 RPS27AP62979 156 aaKnown RBP10.02□□□□□ -0.81
HDAC6-227ENST00000485102 MRPS15P82914 257 aaKnown RBP10.02□□□□□ -0.81
HDAC6-227ENST00000485102 NDPQ00604 133 aa10.02□□□□□ -0.81
HDAC6-227ENST00000485102 TMEM267Q0VDI3 215 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-227ENST00000485102 P2RY14Q15391 338 aa10.02□□□□□ -0.81
HDAC6-227ENST00000485102 CTF1Q16619 201 aa10.02□□□□□ -0.81
HDAC6-227ENST00000485102 C2orf76Q3KRA6 126 aa10.02□□□□□ -0.81
HDAC6-227ENST00000485102 AKIRIN2Q53H80 203 aa10.02□□□□□ -0.81
HDAC6-227ENST00000485102 SIGIRRQ6IA17 410 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms