RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 TPRA1Q86W33 373 aa18.47■□□□□ 0.55
RHBDF1-208ENST00000482904 MRPL41Q8IXM3 137 aaKnown RBP18.47■□□□□ 0.55
RHBDF1-208ENST00000482904 MAFIPQ8WZ33 124 aa18.47■□□□□ 0.55
RHBDF1-208ENST00000482904 KCTD7Q96MP8 289 aa18.47■□□□□ 0.55
RHBDF1-208ENST00000482904 DAPK2Q9UIK4 370 aa18.47■□□□□ 0.55
RHBDF1-208ENST00000482904 ARL6IP1Q15041 203 aa18.46■□□□□ 0.55
RHBDF1-208ENST00000482904 FOXB2Q5VYV0 432 aa18.46■□□□□ 0.55
RHBDF1-208ENST00000482904 LIN54Q6MZP7 749 aa18.46■□□□□ 0.55
RHBDF1-208ENST00000482904 NPBQ8NG41 125 aa18.46■□□□□ 0.55
RHBDF1-208ENST00000482904 OR10J5Q8NHC4 309 aa18.46■□□□□ 0.55
RHBDF1-208ENST00000482904 CHCHD6Q9BRQ6 235 aa18.46■□□□□ 0.55
RHBDF1-208ENST00000482904 OR51E2Q9H255 320 aa18.46■□□□□ 0.55
RHBDF1-208ENST00000482904 OR51J1Q9H342 316 aa18.46■□□□□ 0.55
RHBDF1-208ENST00000482904 ZNF230Q9UIE0 474 aaPredicted RBP18.46■□□□□ 0.55
RHBDF1-208ENST00000482904 ZNF580Q9UK33 172 aa18.46■□□□□ 0.55
RHBDF1-208ENST00000482904 LOC100506127A0A0U1RQW1 187 aa18.45■□□□□ 0.54
RHBDF1-208ENST00000482904 ATP6V0E1O15342 81 aa18.45■□□□□ 0.54
RHBDF1-208ENST00000482904 RBBP9O75884 186 aa18.45■□□□□ 0.54
RHBDF1-208ENST00000482904 NDUFA3O95167 84 aa18.45■□□□□ 0.54
RHBDF1-208ENST00000482904 IGHG4P01861 327 aa18.45■□□□□ 0.54
RHBDF1-208ENST00000482904 CFHR3Q02985 330 aa18.45■□□□□ 0.54
RHBDF1-208ENST00000482904 KCTD21Q4G0X4 260 aa18.45■□□□□ 0.54
RHBDF1-208ENST00000482904 IGSF11Q5DX21 431 aa18.45■□□□□ 0.54
RHBDF1-208ENST00000482904 DRAXINQ8NBI3 349 aaPredicted RBP18.45■□□□□ 0.54
RHBDF1-208ENST00000482904 CABLES2Q9BTV7 478 aa18.45■□□□□ 0.54
RHBDF1-208ENST00000482904 WSB1Q9Y6I7 421 aa18.45■□□□□ 0.54
RHBDF1-208ENST00000482904 M0R1X1 148 aa18.44■□□□□ 0.54
RHBDF1-208ENST00000482904 APOA2P02652 100 aa18.44■□□□□ 0.54
RHBDF1-208ENST00000482904 TFAP2AP05549 437 aa18.44■□□□□ 0.54
RHBDF1-208ENST00000482904 GSTT2P0CG29 244 aa18.44■□□□□ 0.54
RHBDF1-208ENST00000482904 GSTT2BP0CG30 244 aa18.44■□□□□ 0.54
RHBDF1-208ENST00000482904 MYCNOSP40205 109 aa18.44■□□□□ 0.54
RHBDF1-208ENST00000482904 RAB25P57735 213 aa18.44■□□□□ 0.54
RHBDF1-208ENST00000482904 SFXN4Q6P4A7 337 aa18.44■□□□□ 0.54
RHBDF1-208ENST00000482904 OR5AN1Q8NGI8 311 aa18.44■□□□□ 0.54
RHBDF1-208ENST00000482904 MRAPQ8TCY5 172 aa18.44■□□□□ 0.54
RHBDF1-208ENST00000482904 ABHD5Q8WTS1 349 aa18.44■□□□□ 0.54
RHBDF1-208ENST00000482904 DPF1Q92782 380 aa18.44■□□□□ 0.54
RHBDF1-208ENST00000482904 GINS4Q9BRT9 223 aa18.44■□□□□ 0.54
RHBDF1-208ENST00000482904 GPR61Q9BZJ8 451 aa18.44■□□□□ 0.54
RHBDF1-208ENST00000482904 OR2D2Q9H210 308 aa18.44■□□□□ 0.54
RHBDF1-208ENST00000482904 FBXL15Q9H469 300 aa18.44■□□□□ 0.54
RHBDF1-208ENST00000482904 AURKAIP1Q9NWT8 199 aaPredicted RBP18.44■□□□□ 0.54
RHBDF1-208ENST00000482904 NOTCH3Q9UM47 2321 aa18.43■□□□□ 0.54
RHBDF1-208ENST00000482904 IGHV7-81A0A0B4J1V7 117 aa18.43■□□□□ 0.54
RHBDF1-208ENST00000482904 RRHO14718 337 aa18.43■□□□□ 0.54
RHBDF1-208ENST00000482904 MXD1Q05195 221 aa18.43■□□□□ 0.54
RHBDF1-208ENST00000482904 ECSCRQ19T08 205 aa18.43■□□□□ 0.54
RHBDF1-208ENST00000482904 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.43■□□□□ 0.54
RHBDF1-208ENST00000482904 OR8U1Q8NH10 309 aa18.43■□□□□ 0.54
RHBDF1-208ENST00000482904 LGALS14Q8TCE9 139 aa18.43■□□□□ 0.54
RHBDF1-208ENST00000482904 DUX3Q96PT4 197 aa18.43■□□□□ 0.54
RHBDF1-208ENST00000482904 RBM7Q9Y580 266 aaKnown RBP18.43■□□□□ 0.54
RHBDF1-208ENST00000482904 TRAV41A0A0B4J266 112 aa18.42■□□□□ 0.54
RHBDF1-208ENST00000482904 G3V318 75 aa18.42■□□□□ 0.54
RHBDF1-208ENST00000482904 SCGNO76038 276 aa18.42■□□□□ 0.54
RHBDF1-208ENST00000482904 DIRAS3O95661 229 aa18.42■□□□□ 0.54
RHBDF1-208ENST00000482904 OR8U9P0C7N5 309 aa18.42■□□□□ 0.54
RHBDF1-208ENST00000482904 SNRPBP14678 240 aaKnown RBP18.42■□□□□ 0.54
RHBDF1-208ENST00000482904 CD36P16671 472 aa18.42■□□□□ 0.54
RHBDF1-208ENST00000482904 SDC2P34741 201 aa18.42■□□□□ 0.54
RHBDF1-208ENST00000482904 DEFB136Q30KP8 78 aa18.42■□□□□ 0.54
RHBDF1-208ENST00000482904 TMEM65Q6PI78 240 aa18.42■□□□□ 0.54
RHBDF1-208ENST00000482904 RNF152Q8N8N0 203 aa18.42■□□□□ 0.54
RHBDF1-208ENST00000482904 TRBV6-7A0A0A0MS04 114 aa18.41■□□□□ 0.54
RHBDF1-208ENST00000482904 CCL24O00175 119 aa18.41■□□□□ 0.54
RHBDF1-208ENST00000482904 PSMB8P28062 276 aa18.41■□□□□ 0.54
RHBDF1-208ENST00000482904 CDX1P47902 265 aaPredicted RBP18.41■□□□□ 0.54
RHBDF1-208ENST00000482904 CDNFQ49AH0 187 aa18.41■□□□□ 0.54
RHBDF1-208ENST00000482904 ZNF383Q8NA42 475 aa18.41■□□□□ 0.54
RHBDF1-208ENST00000482904 RAX2Q96IS3 184 aa18.41■□□□□ 0.54
RHBDF1-208ENST00000482904 P2RX4Q99571 388 aa18.41■□□□□ 0.54
RHBDF1-208ENST00000482904 TSNAXQ99598 290 aaKnown RBP18.41■□□□□ 0.54
RHBDF1-208ENST00000482904 CENPOQ9BU64 300 aa18.41■□□□□ 0.54
RHBDF1-208ENST00000482904 MCRIP2Q9BUT9 160 aaKnown RBP18.41■□□□□ 0.54
RHBDF1-208ENST00000482904 METTL1Q9UBP6 276 aaKnown RBP18.41■□□□□ 0.54
RHBDF1-208ENST00000482904 A3GALT2U3KPV4 340 aa18.41■□□□□ 0.54
RHBDF1-208ENST00000482904 DTYMKP23919 212 aa18.4■□□□□ 0.54
RHBDF1-208ENST00000482904 RPS16P62249 146 aaKnown RBP18.4■□□□□ 0.54
RHBDF1-208ENST00000482904 PDPNQ86YL7 162 aa18.4■□□□□ 0.54
RHBDF1-208ENST00000482904 C4orf3Q8WVX3 66 aa18.4■□□□□ 0.54
RHBDF1-208ENST00000482904 RNF5Q99942 180 aa18.4■□□□□ 0.54
RHBDF1-208ENST00000482904 RNF167Q9H6Y7 350 aa18.4■□□□□ 0.54
RHBDF1-208ENST00000482904 VCX3AQ9NNX9 186 aa18.4■□□□□ 0.54
RHBDF1-208ENST00000482904 ELF5Q9UKW6 265 aaPredicted RBP18.4■□□□□ 0.54
RHBDF1-208ENST00000482904 PRKDCP78527 4128 aaKnown RBP18.4■□□□□ 0.54
RHBDF1-208ENST00000482904 PROP1O75360 226 aa18.39■□□□□ 0.53
RHBDF1-208ENST00000482904 SPDEFO95238 335 aa18.39■□□□□ 0.53
RHBDF1-208ENST00000482904 IGKV1-16P04430 117 aa18.39■□□□□ 0.53
RHBDF1-208ENST00000482904 CLEC2LP0C7M8 214 aa18.39■□□□□ 0.53
RHBDF1-208ENST00000482904 GNG2P59768 71 aa18.39■□□□□ 0.53
RHBDF1-208ENST00000482904 CX3CL1P78423 397 aa18.39■□□□□ 0.53
RHBDF1-208ENST00000482904 NDPQ00604 133 aa18.39■□□□□ 0.53
RHBDF1-208ENST00000482904 CBX3Q13185 183 aa18.39■□□□□ 0.53
RHBDF1-208ENST00000482904 ZNF660Q6AZW8 331 aaPredicted RBP18.39■□□□□ 0.53
RHBDF1-208ENST00000482904 CLCC1Q96S66 551 aa18.39■□□□□ 0.53
RHBDF1-208ENST00000482904 TOLLIPQ9H0E2 274 aa18.39■□□□□ 0.53
RHBDF1-208ENST00000482904 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.39■□□□□ 0.53
RHBDF1-208ENST00000482904 SLC35D1Q9NTN3 355 aa18.39■□□□□ 0.53
RHBDF1-208ENST00000482904 RHBDL2Q9NX52 303 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms