RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 MCRIP1C9JLW8 97 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 K7N7A8 449 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 RAB27BO00194 218 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 ORC5O43913 435 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 ZNF737O75373 536 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 TK1P04183 234 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 NMBP08949 121 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 IL2RGP31785 369 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 SEC61A1P61619 476 aaKnown RBP9.61□□□□□ -0.87
HPS4-212ENST00000481910 PYY3Q5JQD4 70 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 Q6ZTK2 550 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 PDZD9Q8IXQ8 264 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 OR2C3Q8N628 320 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 OR5D13Q8NGL4 314 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 OR10R2Q8NGX6 335 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 PPP1R35Q8TAP8 253 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 SCARB1Q8WTV0 552 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 RAB40AQ8WXH6 277 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 PHB2Q99623 299 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 CLN8Q9UBY8 286 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 MED13LQ71F56 2210 aa9.61□□□□□ -0.87
HPS4-212ENST00000481910 CXorf65A6NEN9 183 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 PDCD6O75340 191 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 SCGNO76038 276 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 EIF4EP06730 217 aaKnown RBP9.6□□□□□ -0.87
HPS4-212ENST00000481910 RD3LP0DJH9 198 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 ELK1P19419 428 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 TMEM50BP56557 158 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 GNB2P62879 340 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 LOXL1Q08397 574 aaPredicted RBP9.6□□□□□ -0.87
HPS4-212ENST00000481910 RBM39Q14498 530 aaKnown RBP9.6□□□□□ -0.87
HPS4-212ENST00000481910 ZNF841Q6ZN19 808 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 C6orf201Q7Z4U5 140 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 MAPK1IP1LQ8NDC0 245 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 OR4S1Q8NGB4 309 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 RXFP4Q8TDU9 374 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 SSBP3Q9BWW4 388 aaPredicted RBP9.6□□□□□ -0.87
HPS4-212ENST00000481910 FAM234AQ9H0X4 552 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 RCC2Q9P258 522 aaKnown RBP9.6□□□□□ -0.87
HPS4-212ENST00000481910 MALRD1Q5VYJ5 2156 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 A0A096LNT2 108 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 UBE2QL1A1L167 161 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 FABP7O15540 132 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 PHF1O43189 567 aaPredicted RBP9.6□□□□□ -0.87
HPS4-212ENST00000481910 HOXB5P09067 269 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 HOXA5P20719 270 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 CHATP28329 748 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 OR3A1P47881 315 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 CDX1P47902 265 aaPredicted RBP9.6□□□□□ -0.87
HPS4-212ENST00000481910 NPY4RP50391 375 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 DHODHQ02127 395 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 ATXN7L3Q14CW9 347 aaPredicted RBP9.6□□□□□ -0.87
HPS4-212ENST00000481910 WDR25Q64LD2 544 aaPredicted RBP9.6□□□□□ -0.87
HPS4-212ENST00000481910 SHISA2Q6UWI4 295 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 FGFRL1Q8N441 504 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 ARHGAP5-AS1Q96IT6 56 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 TMEM56Q96MV1 263 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 FAAP24Q9BTP7 215 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 GAR1Q9NY12 217 aaKnown RBP9.6□□□□□ -0.87
HPS4-212ENST00000481910 TMEM56-RWDD3S4R434 201 aa9.6□□□□□ -0.87
HPS4-212ENST00000481910 CYSRT1A8MQ03 144 aa9.59□□□□□ -0.87
HPS4-212ENST00000481910 FOXI3A8MTJ6 420 aaPredicted RBP9.59□□□□□ -0.87
HPS4-212ENST00000481910 MGST3O14880 152 aa9.59□□□□□ -0.87
HPS4-212ENST00000481910 FCN3O75636 299 aa9.59□□□□□ -0.87
HPS4-212ENST00000481910 MPC2O95563 127 aa9.59□□□□□ -0.87
HPS4-212ENST00000481910 RCC1P18754 421 aaPredicted RBP9.59□□□□□ -0.87
HPS4-212ENST00000481910 CDK2P24941 298 aa9.59□□□□□ -0.87
HPS4-212ENST00000481910 EDDM3BP56851 147 aa9.59□□□□□ -0.87
HPS4-212ENST00000481910 SELENOTP62341 195 aa9.59□□□□□ -0.87
HPS4-212ENST00000481910 AESQ08117 197 aa9.59□□□□□ -0.87
HPS4-212ENST00000481910 EDDM3AQ14507 147 aa9.59□□□□□ -0.87
HPS4-212ENST00000481910 ARSJQ5FYB0 599 aaPredicted RBP9.59□□□□□ -0.87
HPS4-212ENST00000481910 TRAT1Q6PIZ9 186 aa9.59□□□□□ -0.87
HPS4-212ENST00000481910 LAX1Q8IWV1 398 aa9.59□□□□□ -0.87
HPS4-212ENST00000481910 H1FXQ92522 213 aaKnown RBP9.59□□□□□ -0.87
HPS4-212ENST00000481910 RCC1LQ96I51 464 aaKnown RBP9.59□□□□□ -0.87
HPS4-212ENST00000481910 SDHCQ99643 169 aaPredicted RBP9.59□□□□□ -0.87
HPS4-212ENST00000481910 BEX2Q9BXY8 128 aa9.59□□□□□ -0.87
HPS4-212ENST00000481910 HSF4Q9ULV5 492 aa9.59□□□□□ -0.87
HPS4-212ENST00000481910 MYO9AB2RTY4 2548 aa9.59□□□□□ -0.87
HPS4-212ENST00000481910 YLPM1P49750 1951 aaKnown RBP9.59□□□□□ -0.87
HPS4-212ENST00000481910 ARHGAP32A7KAX9 2087 aa9.58□□□□□ -0.88
HPS4-212ENST00000481910 TRAV18A0A075B6X5 111 aa9.58□□□□□ -0.88
HPS4-212ENST00000481910 FAM157AC9JC47 383 aa9.58□□□□□ -0.88
HPS4-212ENST00000481910 XRCC3O43542 346 aa9.58□□□□□ -0.88
HPS4-212ENST00000481910 CSN2P05814 226 aa9.58□□□□□ -0.88
HPS4-212ENST00000481910 OR8U8P0C7N1 319 aa9.58□□□□□ -0.88
HPS4-212ENST00000481910 GNB3P16520 340 aa9.58□□□□□ -0.88
HPS4-212ENST00000481910 MNDAP41218 407 aa9.58□□□□□ -0.88
HPS4-212ENST00000481910 COMPP49747 757 aaPredicted RBP9.58□□□□□ -0.88
HPS4-212ENST00000481910 RPL19P84098 196 aaKnown RBP9.58□□□□□ -0.88
HPS4-212ENST00000481910 SSX7Q7RTT5 188 aa9.58□□□□□ -0.88
HPS4-212ENST00000481910 RTN4RL2Q86UN3 420 aa9.58□□□□□ -0.88
HPS4-212ENST00000481910 IZUMO1Q8IYV9 350 aa9.58□□□□□ -0.88
HPS4-212ENST00000481910 CIARTQ8N365 385 aaPredicted RBP9.58□□□□□ -0.88
HPS4-212ENST00000481910 THAP6Q8TBB0 222 aa9.58□□□□□ -0.88
HPS4-212ENST00000481910 MALSU1Q96EH3 234 aa9.58□□□□□ -0.88
HPS4-212ENST00000481910 DIRAS2Q96HU8 199 aa9.58□□□□□ -0.88
HPS4-212ENST00000481910 CYYR1Q96J86 154 aa9.58□□□□□ -0.88
HPS4-212ENST00000481910 SULT4A1Q9BR01 284 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms