RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 TNFAIP8L1Q8WVP5 186 aa5.42□□□□□ -1.54
VCP-205ENST00000479300 HPSE2Q8WWQ2 592 aa5.42□□□□□ -1.54
VCP-205ENST00000479300 SLAMF9Q96A28 289 aa5.42□□□□□ -1.54
VCP-205ENST00000479300 SAT2Q96F10 170 aaPredicted RBP5.42□□□□□ -1.54
VCP-205ENST00000479300 ZNF471Q9BX82 626 aaPredicted RBP5.42□□□□□ -1.54
VCP-205ENST00000479300 ADGRL4Q9HBW9 690 aa5.42□□□□□ -1.54
VCP-205ENST00000479300 RAB18Q9NP72 206 aa5.42□□□□□ -1.54
VCP-205ENST00000479300 TREM1Q9NP99 234 aa5.42□□□□□ -1.54
VCP-205ENST00000479300 C19orf12Q9NSK7 152 aa5.42□□□□□ -1.54
VCP-205ENST00000479300 AURKAIP1Q9NWT8 199 aaPredicted RBP5.42□□□□□ -1.54
VCP-205ENST00000479300 COMMD9Q9P000 198 aa5.42□□□□□ -1.54
VCP-205ENST00000479300 VPREB3Q9UKI3 123 aa5.42□□□□□ -1.54
VCP-205ENST00000479300 ETV7Q9Y603 341 aa5.42□□□□□ -1.54
VCP-205ENST00000479300 V9GYS6 101 aa5.42□□□□□ -1.54
VCP-205ENST00000479300 EPPK1P58107 5090 aaKnown RBP5.41□□□□□ -1.54
VCP-205ENST00000479300 IGKV1D-17A0A075B6S4 117 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 TMEM272A0A1B0GTI8 110 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 DAPL1A0PJW8 107 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 METTL21EPA6NDL7 271 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 RNASEK-C17orf49H0YIS7 233 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 TCAPO15273 167 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 RBBP9O75884 186 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 CHRM2P08172 466 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 PGA5P0DJD9 388 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 HLA-GP17693 338 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 RAB5AP20339 215 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 DDTP30046 118 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 SAA4P35542 130 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 CDX1P47902 265 aaPredicted RBP5.41□□□□□ -1.54
VCP-205ENST00000479300 CAV2P51636 162 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 FUT6P51993 359 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 ATP1B3P54709 279 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 DLX1P56177 255 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 LOXL3P58215 753 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 ERVFRD-1P60508 538 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 RPL31P62899 125 aaKnown RBP5.41□□□□□ -1.54
VCP-205ENST00000479300 MFGE8Q08431 387 aaPredicted RBP5.41□□□□□ -1.54
VCP-205ENST00000479300 KLRD1Q13241 179 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 C4orf46Q504U0 113 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 ACSM3Q53FZ2 586 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 VAX1Q5SQQ9 334 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 OR52W1Q6IF63 320 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 OR10K2Q6IF99 312 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 C11orf88Q6PI97 169 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 MKXQ8IYA7 352 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 Q8IYB0 196 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 C11orf44Q8N8P7 122 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 ZNF383Q8NA42 475 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 OR4A4PQ8NGN8 299 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 OR4C13Q8NGP0 309 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 OR5M8Q8NGP6 311 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 PPP1R35Q8TAP8 253 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 NUDCD2Q8WVJ2 157 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 CFHR4Q92496 578 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 RAB24Q969Q5 203 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 PPP1R14AQ96A00 147 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 BORCS8Q96FH0 119 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 WDR89Q96FK6 387 aaPredicted RBP5.41□□□□□ -1.54
VCP-205ENST00000479300 S100A16Q96FQ6 103 aaKnown RBP5.41□□□□□ -1.54
VCP-205ENST00000479300 SDSLQ96GA7 329 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 PGLYRP3Q96LB9 341 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 S100A13Q99584 98 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 PKIBQ9C010 78 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 CHST5Q9GZS9 411 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 METTL9Q9H1A3 318 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 ELL3Q9HB65 397 aaPredicted RBP5.41□□□□□ -1.54
VCP-205ENST00000479300 ZNRD1Q9P1U0 126 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 MRM2Q9UI43 246 aaKnown RBP5.41□□□□□ -1.54
VCP-205ENST00000479300 GNG8Q9UK08 70 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 FOXJ3Q9UPW0 622 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 SLC22A13Q9Y226 551 aa5.41□□□□□ -1.54
VCP-205ENST00000479300 SIRT4Q9Y6E7 314 aaPredicted RBP5.41□□□□□ -1.54
VCP-205ENST00000479300 ELOA3CA0A087WX78 387 aaPredicted RBP5.4□□□□□ -1.54
VCP-205ENST00000479300 A0A1W2PPE3 182 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 OR5H14A6NHG9 310 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 H3BUX3 64 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 MAGEB4O15481 346 aaPredicted RBP5.4□□□□□ -1.54
VCP-205ENST00000479300 OGG1O15527 345 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 SYNGR1O43759 233 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 IGLV3-1P01715 115 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 TFF1P04155 84 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 TK1P04183 234 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 CD74P04233 296 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 AKAIN1P0CW23 69 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 NQO2P16083 231 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 COX7A1P24310 79 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 NFYBP25208 207 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 EFNB2P52799 333 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 EDDM3BP56851 147 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 IL24Q13007 206 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 ALKBH1Q13686 389 aaKnown RBP5.4□□□□□ -1.54
VCP-205ENST00000479300 LRRC75BQ2VPJ9 315 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 DMRTC1Q5HYR2 192 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 PYY3Q5JQD4 70 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 LY6G6FQ5SQ64 297 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 TMEM69Q5SWH9 247 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 AWAT2Q6E213 333 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 SLC35E4Q6ICL7 350 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 UNQ9370/PRO34162Q6UXP9 181 aa5.4□□□□□ -1.54
VCP-205ENST00000479300 CATSPERDQ86XM0 798 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms