RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 SIGLEC9Q9Y336 463 aa12.29□□□□□ -0.44
C9orf3-217ENST00000479161 TET2Q6N021 2002 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-217ENST00000479161 IGHV3-72A0A0B4J1Y9 119 aa12.28□□□□□ -0.44
C9orf3-217ENST00000479161 ZNF736B4DX44 427 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-217ENST00000479161 HLA-DQB1P01920 261 aa12.28□□□□□ -0.44
C9orf3-217ENST00000479161 GPR12P47775 334 aa12.28□□□□□ -0.44
C9orf3-217ENST00000479161 MSMO1Q15800 293 aa12.28□□□□□ -0.44
C9orf3-217ENST00000479161 BEST4Q8NFU0 473 aa12.28□□□□□ -0.44
C9orf3-217ENST00000479161 COMMD3Q9UBI1 195 aa12.28□□□□□ -0.44
C9orf3-217ENST00000479161 ADAM30Q9UKF2 790 aa12.28□□□□□ -0.44
C9orf3-217ENST00000479161 OR2W1Q9Y3N9 320 aa12.28□□□□□ -0.44
C9orf3-217ENST00000479161 H0YJW9 148 aa12.27□□□□□ -0.45
C9orf3-217ENST00000479161 SULT1C2O00338 296 aa12.27□□□□□ -0.45
C9orf3-217ENST00000479161 KCNAB3O43448 404 aa12.27□□□□□ -0.45
C9orf3-217ENST00000479161 TUSC2O75896 110 aa12.27□□□□□ -0.45
C9orf3-217ENST00000479161 NDUFA3O95167 84 aa12.27□□□□□ -0.45
C9orf3-217ENST00000479161 OR8U9P0C7N5 309 aa12.27□□□□□ -0.45
C9orf3-217ENST00000479161 NAT1P18440 290 aa12.27□□□□□ -0.45
C9orf3-217ENST00000479161 SOX6P35712 828 aa12.27□□□□□ -0.45
C9orf3-217ENST00000479161 TAS2R20P59543 309 aa12.27□□□□□ -0.45
C9orf3-217ENST00000479161 HNF4GQ14541 408 aa12.27□□□□□ -0.45
C9orf3-217ENST00000479161 CLVS1Q8IUQ0 354 aaPredicted RBP12.27□□□□□ -0.45
C9orf3-217ENST00000479161 OR8U1Q8NH10 309 aa12.27□□□□□ -0.45
C9orf3-217ENST00000479161 C15orf40Q8WUR7 153 aa12.27□□□□□ -0.45
C9orf3-217ENST00000479161 MAFIPQ8WZ33 124 aa12.27□□□□□ -0.45
C9orf3-217ENST00000479161 ADTRPQ96IZ2 230 aa12.27□□□□□ -0.45
C9orf3-217ENST00000479161 SCPEP1Q9HB40 452 aa12.27□□□□□ -0.45
C9orf3-217ENST00000479161 WASHC3Q9Y3C0 194 aa12.27□□□□□ -0.45
C9orf3-217ENST00000479161 M0QZ24 198 aa12.26□□□□□ -0.45
C9orf3-217ENST00000479161 PEX14O75381 377 aa12.26□□□□□ -0.45
C9orf3-217ENST00000479161 EIF4EP06730 217 aaKnown RBP12.26□□□□□ -0.45
C9orf3-217ENST00000479161 PRSS3P35030 304 aa12.26□□□□□ -0.45
C9orf3-217ENST00000479161 ACTBP60709 375 aa12.26□□□□□ -0.45
C9orf3-217ENST00000479161 RPL39P5Q59GN2 51 aa12.26□□□□□ -0.45
C9orf3-217ENST00000479161 ARSJQ5FYB0 599 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-217ENST00000479161 FOXB2Q5VYV0 432 aa12.26□□□□□ -0.45
C9orf3-217ENST00000479161 PDPNQ86YL7 162 aa12.26□□□□□ -0.45
C9orf3-217ENST00000479161 CHPT1Q8WUD6 406 aa12.26□□□□□ -0.45
C9orf3-217ENST00000479161 SDHAF2Q9NX18 166 aa12.26□□□□□ -0.45
C9orf3-217ENST00000479161 VWFP04275 2813 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 NCBP2LA6PVI3 153 aaKnown RBP12.25□□□□□ -0.45
C9orf3-217ENST00000479161 RRASP10301 218 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 ELK1P19419 428 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 LUMP51884 338 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-217ENST00000479161 F2RL1P55085 397 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 SRSF4Q08170 494 aaKnown RBP12.25□□□□□ -0.45
C9orf3-217ENST00000479161 FOXRED2Q8IWF2 684 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 COMMD1Q8N668 190 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 ZNF645Q8N7E2 425 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 OR5AP2Q8NGF4 316 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 DYNC2LI1Q8TCX1 351 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 GPX8Q8TED1 209 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 GIMAP1Q8WWP7 306 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 RASL11BQ9BPW5 248 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 GON7Q9BXV9 100 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 OR2D2Q9H210 308 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 NECAP2Q9NVZ3 263 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 CCDC59Q9P031 241 aaKnown RBP12.25□□□□□ -0.45
C9orf3-217ENST00000479161 RABL2AQ9UBK7 228 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-217ENST00000479161 RNF150Q9ULK6 438 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 RABL2BQ9UNT1 228 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 PLXNB1O43157 2135 aa12.25□□□□□ -0.45
C9orf3-217ENST00000479161 ZNF701M0R085 212 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-217ENST00000479161 AP4M1O00189 453 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 NBR2O15453 112 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 SPDEFO95238 335 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 HLA-DRB1P01911 266 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 APOA2P02652 100 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 IGF1P05019 195 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 VSIG10L2P0DP72 767 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 THBS3P49746 956 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 ARPC4P59998 168 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 CD83Q01151 205 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 SPCS2Q15005 226 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 MMDQ15546 238 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 DHRS11Q6UWP2 260 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 FAM131AQ6UXB0 335 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 SLC35E3Q7Z769 313 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 CENPVQ7Z7K6 275 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-217ENST00000479161 GVQW1Q8N7I0 195 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 ZNF383Q8NA42 475 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 SNAPC3Q92966 411 aa12.24□□□□□ -0.45
C9orf3-217ENST00000479161 RBM7Q9Y580 266 aaKnown RBP12.24□□□□□ -0.45
C9orf3-217ENST00000479161 M0R1X1 148 aa12.23□□□□□ -0.45
C9orf3-217ENST00000479161 HPGDSO60760 199 aa12.23□□□□□ -0.45
C9orf3-217ENST00000479161 NOL3O60936 208 aaKnown RBP12.23□□□□□ -0.45
C9orf3-217ENST00000479161 FBXO24O75426 580 aa12.23□□□□□ -0.45
C9orf3-217ENST00000479161 LGALS7P47929 136 aa12.23□□□□□ -0.45
C9orf3-217ENST00000479161 TAS2R46P59540 309 aa12.23□□□□□ -0.45
C9orf3-217ENST00000479161 C5orf64Q2M2E5 130 aa12.23□□□□□ -0.45
C9orf3-217ENST00000479161 C2orf68Q2NKX9 166 aa12.23□□□□□ -0.45
C9orf3-217ENST00000479161 OVCH2Q7RTZ1 564 aa12.23□□□□□ -0.45
C9orf3-217ENST00000479161 NDUFA11Q86Y39 141 aa12.23□□□□□ -0.45
C9orf3-217ENST00000479161 ZBTB34Q8NCN2 500 aa12.23□□□□□ -0.45
C9orf3-217ENST00000479161 OR5AU1Q8NGC0 362 aa12.23□□□□□ -0.45
C9orf3-217ENST00000479161 BORCS5Q969J3 196 aa12.23□□□□□ -0.45
C9orf3-217ENST00000479161 ISOC1Q96CN7 298 aa12.23□□□□□ -0.45
C9orf3-217ENST00000479161 TSNAXQ99598 290 aaKnown RBP12.23□□□□□ -0.45
C9orf3-217ENST00000479161 IFT46Q9NQC8 304 aa12.23□□□□□ -0.45
C9orf3-217ENST00000479161 KIAA1456Q9P272 454 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms