RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 A3GALT2U3KPV4 340 aa11.23□□□□□ -0.61
SMARCE1-209ENST00000478349 RGS10O43665 173 aa11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 TFAP2AP05549 437 aa11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 OR8U9P0C7N5 309 aa11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 CT45A6P0DMU7 189 aa11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 CT45A5P0DMU8 189 aa11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 CT45A7P0DMV0 189 aa11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 GNB1P62873 340 aa11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 QRFPP83859 136 aa11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 PITPNAQ00169 270 aa11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 AKIRIN2Q53H80 203 aa11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 ZNF562Q6V9R5 426 aa11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 PPP1R27Q86WC6 154 aa11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 PTX4Q96A99 478 aa11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 CMSS1Q9BQ75 279 aaKnown RBP11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 LPAR5Q9H1C0 372 aa11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 VCX3BQ9H321 246 aa11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 ACOT13Q9NPJ3 140 aa11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 TENM3Q9P273 2699 aa11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 METTL1Q9UBP6 276 aaKnown RBP11.22□□□□□ -0.61
SMARCE1-209ENST00000478349 CD37P11049 281 aa11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 TAGLNQ01995 201 aaKnown RBP11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 MLLT11Q13015 90 aaPredicted RBP11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 TPBGQ13641 420 aa11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 P2RY14Q15391 338 aa11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 UNQ5815/PRO19632Q6UWF5 114 aa11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 FAM89BQ8N5H3 189 aa11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 DCUN1D4Q92564 292 aa11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 ARPC1AQ92747 370 aa11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 TMEM203Q969S6 136 aa11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 ABHD14BQ96IU4 210 aa11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 RITA1Q96K30 269 aa11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 OR4C12Q96R67 309 aa11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 AGMATQ9BSE5 352 aa11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 ELOVL1Q9BW60 279 aa11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 TOLLIPQ9H0E2 274 aa11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 C11orf54Q9H0W9 315 aaPredicted RBP11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 Q9N2K0 584 aa11.21□□□□□ -0.61
SMARCE1-209ENST00000478349 TRDCB7Z8K6 153 aa11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 H3BUA1 57 aa11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 PDCD5O14737 125 aa11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 SOCS1O15524 211 aa11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 DIRAS3O95661 229 aa11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 CD3GP09693 182 aa11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 GADD45AP24522 165 aa11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 CALRP27797 417 aaKnown RBP11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 TPPP2P59282 170 aa11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 RPS16P62249 146 aaKnown RBP11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 NDPQ00604 133 aa11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 KIAA0141Q14154 515 aaPredicted RBP11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 C19orf54Q5BKX5 351 aa11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 GLDNQ6ZMI3 551 aaPredicted RBP11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 OR4A4PQ8NGN8 299 aa11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 CCDC90BQ9GZT6 254 aa11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 KCNK15Q9H427 330 aa11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 OR1A1Q9P1Q5 309 aa11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 BLOC1S6Q9UL45 172 aa11.2□□□□□ -0.62
SMARCE1-209ENST00000478349 A0A0G2JLM5 398 aa11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 C3orf84H3BNL1 204 aa11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 DENRO43583 198 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 CA2P00918 260 aa11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 HSPB1P04792 205 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 ZP3P21754 424 aa11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 LGALS7P47929 136 aa11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 HSPA13P48723 471 aa11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 VEGFCP49767 419 aa11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 IRF3Q14653 427 aa11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 PSG5Q15238 335 aa11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 MOGAT2Q3SYC2 334 aa11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 ASPHD1Q5U4P2 390 aa11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 FAM3DQ96BQ1 224 aa11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 TMEM68Q96MH6 324 aa11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 RDH8Q9NYR8 311 aa11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 AK6Q9Y3D8 172 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 NUBP2Q9Y5Y2 271 aa11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 V9GY05 133 aa11.19□□□□□ -0.62
SMARCE1-209ENST00000478349 A0A0A6YYD4 124 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 C13orf42A0A1B0GVH6 325 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 M0R1X1 148 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 CNIH1O95406 144 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 TRGV3P03979 118 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 RPS25P62851 125 aaKnown RBP11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 ARL6IP1Q15041 203 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 RTL8BQ17RB0 113 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 ACSM6Q6P461 480 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 PRSS48Q7RTY5 328 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 C5orf24Q7Z6I8 188 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 LFNGQ8NES3 379 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 OR10J5Q8NHC4 309 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 GRPEL2Q8TAA5 225 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 DLX4Q92988 240 aaPredicted RBP11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 RAB3CQ96E17 227 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 RBMXL1Q96E39 390 aaKnown RBP11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 ARHGAP5-AS1Q96IT6 56 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 CLCC1Q96S66 551 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 HDHD3Q9BSH5 251 aaPredicted RBP11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 PECRQ9BY49 303 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 DUSP21Q9H596 190 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 ZNF355PQ9NSJ1 428 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms