RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 HKR1P10072 659 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 RRASP10301 218 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 RPL12P30050 165 aaKnown RBP5.54□□□□□ -1.52
LDB3-206ENST00000477489 GLIPR1P48060 266 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 TAS2R30P59541 319 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 S100A10P60903 97 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 TAGLNQ01995 201 aaKnown RBP5.54□□□□□ -1.52
LDB3-206ENST00000477489 ID3Q02535 119 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 SNTB1Q13884 538 aaKnown RBP5.54□□□□□ -1.52
LDB3-206ENST00000477489 SP6Q3SY56 376 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 ZNF672Q499Z4 452 aaPredicted RBP5.54□□□□□ -1.52
LDB3-206ENST00000477489 FAM71F2Q6NXP2 309 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 MEX3BQ6ZN04 569 aaKnown RBP5.54□□□□□ -1.52
LDB3-206ENST00000477489 PDZD9Q8IXQ8 264 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 EIF4E3Q8N5X7 224 aaKnown RBP5.54□□□□□ -1.52
LDB3-206ENST00000477489 DRAM1Q8N682 238 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 UBAC2Q8NBM4 344 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 OR13A1Q8NGR1 328 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 OR8U1Q8NH10 309 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 OR1L1Q8NH94 360 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 LHFPL5Q8TAF8 219 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 MRGPRDQ8TDS7 321 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 RRNAD1Q96FB5 475 aaKnown RBP5.54□□□□□ -1.52
LDB3-206ENST00000477489 AIFM2Q9BRQ8 373 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 AGMATQ9BSE5 352 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 ZNF471Q9BX82 626 aaPredicted RBP5.54□□□□□ -1.52
LDB3-206ENST00000477489 GAL3ST2Q9H3Q3 398 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 TMEM106BQ9NUM4 274 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 CALYQ9NYX4 217 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 CLN8Q9UBY8 286 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 LINC00312Q9Y6C7 94 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 PCNX1Q96RV3 2341 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 ANKHD1Q8IWZ3 2542 aaKnown RBP5.53□□□□□ -1.52
LDB3-206ENST00000477489 KIAA2026Q5HYC2 2103 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 FBN2P35556 2912 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 BORCS7-ASMTA0A0B4J1R7 106 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 MPTX1A8MV57 137 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 E7EQL1 145 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 TOR1AO14656 332 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 TNFRSF13BO14836 293 aaPredicted RBP5.53□□□□□ -1.52
LDB3-206ENST00000477489 PAX4O43316 350 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 ZG16O60844 167 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 ZNF205O95201 554 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 CLDN14O95500 239 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 CFDP00746 253 aaPredicted RBP5.53□□□□□ -1.52
LDB3-206ENST00000477489 RBP4P02753 201 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 NMBP08949 121 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 DAOP14920 347 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 CEBPDP49716 269 aaPredicted RBP5.53□□□□□ -1.52
LDB3-206ENST00000477489 RAB5CP51148 216 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 LOXL3P58215 753 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 ZNF266Q14584 549 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 MORN2Q502X0 79 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 MIDNQ504T8 468 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 LRRC10Q5BKY1 277 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 HSD17B13Q7Z5P4 300 aaPredicted RBP5.53□□□□□ -1.52
LDB3-206ENST00000477489 KRTAP1-3Q8IUG1 177 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 PRR18Q8N4B5 295 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 OR2C3Q8N628 320 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 OR51H1Q8NH63 302 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 RNF141Q8WVD5 230 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 SAT2Q96F10 170 aaPredicted RBP5.53□□□□□ -1.52
LDB3-206ENST00000477489 GAFA1Q96PS6 74 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 OR2D2Q9H210 308 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 ARV1Q9H2C2 271 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 C11orf1Q9H5F2 150 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 ZC4H2Q9NQZ6 224 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 CYTL1Q9NRR1 136 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 LYRM2Q9NU23 88 aaPredicted RBP5.53□□□□□ -1.52
LDB3-206ENST00000477489 GFOD1Q9NXC2 390 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 CISD1Q9NZ45 108 aaKnown RBP5.53□□□□□ -1.52
LDB3-206ENST00000477489 OR5AC2Q9NZP5 309 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 GNG12Q9UBI6 72 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 PFDN2Q9UHV9 154 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 KCNS2Q9ULS6 477 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 WSB1Q9Y6I7 421 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 SESN1Q9Y6P5 492 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 DSCAMO60469 2012 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 CACNA1DQ01668 2161 aa5.53□□□□□ -1.52
LDB3-206ENST00000477489 HCFC1P51610 2035 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 IGHV1-69-2A0A0G2JMI3 117 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 IGHV3-64DA0A0J9YX35 117 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 A0A1W2PPH5 198 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 NKX2-6A6NCS4 301 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 FAM90A27PA6NNH2 459 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 WRBO00258 174 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 RAB29O14966 203 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 FGF16O43320 207 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 ADAM20O43506 726 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 NDUFB3O43676 98 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 DFFBO76075 338 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 SPDEFO95238 335 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 CLDN1O95832 211 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 CYB5R3P00387 301 aaPredicted RBP5.52□□□□□ -1.53
LDB3-206ENST00000477489 HPRT1P00492 218 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 SEC11BP0C7V7 166 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 P0C879 139 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 FOSL1P15407 271 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 CD80P33681 288 aa5.52□□□□□ -1.53
LDB3-206ENST00000477489 SSTR5P35346 364 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms