RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 GINS4Q9BRT9 223 aa12.61□□□□□ -0.39
ITGB1-210ENST00000474568 OR2D2Q9H210 308 aa12.61□□□□□ -0.39
ITGB1-210ENST00000474568 RBM7Q9Y580 266 aaKnown RBP12.61□□□□□ -0.39
ITGB1-210ENST00000474568 TRAV18A0A075B6X5 111 aa12.6□□□□□ -0.39
ITGB1-210ENST00000474568 TRBV6-7A0A0A0MS04 114 aa12.6□□□□□ -0.39
ITGB1-210ENST00000474568 PROP1O75360 226 aa12.6□□□□□ -0.39
ITGB1-210ENST00000474568 GSTP1P09211 210 aaKnown RBP12.6□□□□□ -0.39
ITGB1-210ENST00000474568 SERPINB10P48595 397 aa12.6□□□□□ -0.39
ITGB1-210ENST00000474568 ARL6IP1Q15041 203 aa12.6□□□□□ -0.39
ITGB1-210ENST00000474568 ZNF260Q3ZCT1 412 aa12.6□□□□□ -0.39
ITGB1-210ENST00000474568 FBXL15Q9H469 300 aa12.6□□□□□ -0.39
ITGB1-210ENST00000474568 KIAA1456Q9P272 454 aa12.6□□□□□ -0.39
ITGB1-210ENST00000474568 OR5H14A6NHG9 310 aa12.59□□□□□ -0.39
ITGB1-210ENST00000474568 NUDT19A8MXV4 375 aa12.59□□□□□ -0.39
ITGB1-210ENST00000474568 SSX5O60225 188 aa12.59□□□□□ -0.39
ITGB1-210ENST00000474568 PF4P02776 101 aa12.59□□□□□ -0.39
ITGB1-210ENST00000474568 FCER2P06734 321 aa12.59□□□□□ -0.39
ITGB1-210ENST00000474568 DTYMKP23919 212 aa12.59□□□□□ -0.39
ITGB1-210ENST00000474568 RPS19P39019 145 aaKnown RBP12.59□□□□□ -0.39
ITGB1-210ENST00000474568 PLGLAQ15195 96 aa12.59□□□□□ -0.39
ITGB1-210ENST00000474568 C5orf64Q2M2E5 130 aa12.59□□□□□ -0.39
ITGB1-210ENST00000474568 ZNF383Q8NA42 475 aa12.59□□□□□ -0.39
ITGB1-210ENST00000474568 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.59□□□□□ -0.39
ITGB1-210ENST00000474568 PARP11Q9NR21 331 aa12.59□□□□□ -0.39
ITGB1-210ENST00000474568 WASHC3Q9Y3C0 194 aa12.59□□□□□ -0.39
ITGB1-210ENST00000474568 ETV7Q9Y603 341 aa12.59□□□□□ -0.39
ITGB1-210ENST00000474568 WSB1Q9Y6I7 421 aa12.59□□□□□ -0.39
ITGB1-210ENST00000474568 MEGF8Q7Z7M0 2845 aa12.59□□□□□ -0.39
ITGB1-210ENST00000474568 RRP9O43818 475 aaKnown RBP12.58□□□□□ -0.4
ITGB1-210ENST00000474568 SCGNO76038 276 aa12.58□□□□□ -0.4
ITGB1-210ENST00000474568 TFAP2AP05549 437 aa12.58□□□□□ -0.4
ITGB1-210ENST00000474568 PTHLHP12272 177 aa12.58□□□□□ -0.4
ITGB1-210ENST00000474568 VDAC1P21796 283 aa12.58□□□□□ -0.4
ITGB1-210ENST00000474568 NCS1P62166 190 aa12.58□□□□□ -0.4
ITGB1-210ENST00000474568 RPL23AP62750 156 aaKnown RBP12.58□□□□□ -0.4
ITGB1-210ENST00000474568 PNLIPRP3Q17RR3 467 aa12.58□□□□□ -0.4
ITGB1-210ENST00000474568 OR5AN1Q8NGI8 311 aa12.58□□□□□ -0.4
ITGB1-210ENST00000474568 C5orf30Q96GV9 206 aa12.58□□□□□ -0.4
ITGB1-210ENST00000474568 CLCC1Q96S66 551 aa12.58□□□□□ -0.4
ITGB1-210ENST00000474568 FUNDC2Q9BWH2 189 aa12.58□□□□□ -0.4
ITGB1-210ENST00000474568 GHITMQ9H3K2 345 aa12.58□□□□□ -0.4
ITGB1-210ENST00000474568 SDHAF2Q9NX18 166 aa12.58□□□□□ -0.4
ITGB1-210ENST00000474568 IGHV7-81A0A0B4J1V7 117 aa12.57□□□□□ -0.4
ITGB1-210ENST00000474568 TRIM64CA6NLI5 447 aa12.57□□□□□ -0.4
ITGB1-210ENST00000474568 ATP6V0E1O15342 81 aa12.57□□□□□ -0.4
ITGB1-210ENST00000474568 APOA2P02652 100 aa12.57□□□□□ -0.4
ITGB1-210ENST00000474568 IGKV1-16P04430 117 aa12.57□□□□□ -0.4
ITGB1-210ENST00000474568 RPLP1P05386 114 aaKnown RBP12.57□□□□□ -0.4
ITGB1-210ENST00000474568 SMIM18P0DKX4 95 aa12.57□□□□□ -0.4
ITGB1-210ENST00000474568 CD33P20138 364 aa12.57□□□□□ -0.4
ITGB1-210ENST00000474568 NFYAP23511 347 aaPredicted RBP12.57□□□□□ -0.4
ITGB1-210ENST00000474568 MC5RP33032 325 aa12.57□□□□□ -0.4
ITGB1-210ENST00000474568 RPS16P62249 146 aaKnown RBP12.57□□□□□ -0.4
ITGB1-210ENST00000474568 OXLD1Q5BKU9 147 aa12.57□□□□□ -0.4
ITGB1-210ENST00000474568 LIN54Q6MZP7 749 aa12.57□□□□□ -0.4
ITGB1-210ENST00000474568 C8orf86Q6ZUL3 223 aa12.57□□□□□ -0.4
ITGB1-210ENST00000474568 H1FOOQ8IZA3 346 aaPredicted RBP12.57□□□□□ -0.4
ITGB1-210ENST00000474568 NPBQ8NG41 125 aa12.57□□□□□ -0.4
ITGB1-210ENST00000474568 TOLLIPQ9H0E2 274 aa12.57□□□□□ -0.4
ITGB1-210ENST00000474568 SLC35D1Q9NTN3 355 aa12.57□□□□□ -0.4
ITGB1-210ENST00000474568 SPATA2Q9UM82 520 aa12.57□□□□□ -0.4
ITGB1-210ENST00000474568 G3V318 75 aa12.56□□□□□ -0.4
ITGB1-210ENST00000474568 RRHO14718 337 aa12.56□□□□□ -0.4
ITGB1-210ENST00000474568 NDUFA3O95167 84 aa12.56□□□□□ -0.4
ITGB1-210ENST00000474568 HLA-DRB1P01911 266 aa12.56□□□□□ -0.4
ITGB1-210ENST00000474568 PRB2P02812 416 aaPredicted RBP12.56□□□□□ -0.4
ITGB1-210ENST00000474568 SCAND1P57086 179 aa12.56□□□□□ -0.4
ITGB1-210ENST00000474568 VBP1P61758 197 aa12.56□□□□□ -0.4
ITGB1-210ENST00000474568 PITPNAQ00169 270 aa12.56□□□□□ -0.4
ITGB1-210ENST00000474568 NDPQ00604 133 aa12.56□□□□□ -0.4
ITGB1-210ENST00000474568 SRSF7Q16629 238 aaKnown RBP eCLIP12.56□□□□□ -0.4
ITGB1-210ENST00000474568 TEX38Q6PEX7 206 aa12.56□□□□□ -0.4
ITGB1-210ENST00000474568 Q6ZS49 121 aa12.56□□□□□ -0.4
ITGB1-210ENST00000474568 GVQW1Q8N7I0 195 aa12.56□□□□□ -0.4
ITGB1-210ENST00000474568 KLHL30-AS1Q8NEE0 82 aa12.56□□□□□ -0.4
ITGB1-210ENST00000474568 ABHD5Q8WTS1 349 aa12.56□□□□□ -0.4
ITGB1-210ENST00000474568 DUX3Q96PT4 197 aa12.56□□□□□ -0.4
ITGB1-210ENST00000474568 OR51J1Q9H342 316 aa12.56□□□□□ -0.4
ITGB1-210ENST00000474568 A3GALT2U3KPV4 340 aa12.56□□□□□ -0.4
ITGB1-210ENST00000474568 MEIS3P1A6NDR6 274 aa12.55□□□□□ -0.4
ITGB1-210ENST00000474568 FCN1O00602 326 aa12.55□□□□□ -0.4
ITGB1-210ENST00000474568 IGLL1P15814 213 aa12.55□□□□□ -0.4
ITGB1-210ENST00000474568 PSG5Q15238 335 aa12.55□□□□□ -0.4
ITGB1-210ENST00000474568 ECSCRQ19T08 205 aa12.55□□□□□ -0.4
ITGB1-210ENST00000474568 CXorf66Q5JRM2 361 aaPredicted RBP12.55□□□□□ -0.4
ITGB1-210ENST00000474568 SAMD5Q5TGI4 173 aa12.55□□□□□ -0.4
ITGB1-210ENST00000474568 COMMD1Q8N668 190 aa12.55□□□□□ -0.4
ITGB1-210ENST00000474568 SAMD12Q8N8I0 201 aa12.55□□□□□ -0.4
ITGB1-210ENST00000474568 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.55□□□□□ -0.4
ITGB1-210ENST00000474568 BVESQ8NE79 360 aa12.55□□□□□ -0.4
ITGB1-210ENST00000474568 OR13F1Q8NGS4 319 aa12.55□□□□□ -0.4
ITGB1-210ENST00000474568 GON7Q9BXV9 100 aa12.55□□□□□ -0.4
ITGB1-210ENST00000474568 NAA50Q9GZZ1 169 aaKnown RBP12.55□□□□□ -0.4
ITGB1-210ENST00000474568 DCSTAMPQ9H295 470 aa12.55□□□□□ -0.4
ITGB1-210ENST00000474568 DIABLOQ9NR28 239 aa12.55□□□□□ -0.4
ITGB1-210ENST00000474568 METTL1Q9UBP6 276 aaKnown RBP12.55□□□□□ -0.4
ITGB1-210ENST00000474568 GAB2Q9UQC2 676 aa12.55□□□□□ -0.4
ITGB1-210ENST00000474568 RBBP9O75884 186 aa12.54□□□□□ -0.4
ITGB1-210ENST00000474568 DIRAS3O95661 229 aa12.54□□□□□ -0.4
ITGB1-210ENST00000474568 IGF1P05019 195 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms