RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 HSPA13P48723 471 aa14.43□□□□□ -0.1
COL7A1-209ENST00000474432 RAB25P57735 213 aa14.43□□□□□ -0.1
COL7A1-209ENST00000474432 CX3CL1P78423 397 aa14.43□□□□□ -0.1
COL7A1-209ENST00000474432 RUNX1Q01196 453 aa14.43□□□□□ -0.1
COL7A1-209ENST00000474432 NR2C2APQ86WQ0 139 aa14.43□□□□□ -0.1
COL7A1-209ENST00000474432 DRAXINQ8NBI3 349 aaPredicted RBP14.43□□□□□ -0.1
COL7A1-209ENST00000474432 OR56B1Q8NGI3 324 aa14.43□□□□□ -0.1
COL7A1-209ENST00000474432 DPF1Q92782 380 aa14.43□□□□□ -0.1
COL7A1-209ENST00000474432 TOLLIPQ9H0E2 274 aa14.43□□□□□ -0.1
COL7A1-209ENST00000474432 VCX3BQ9H321 246 aa14.43□□□□□ -0.1
COL7A1-209ENST00000474432 GHITMQ9H3K2 345 aa14.43□□□□□ -0.1
COL7A1-209ENST00000474432 NDUFB11Q9NX14 153 aa14.43□□□□□ -0.1
COL7A1-209ENST00000474432 MGAT4AQ9UM21 535 aa14.43□□□□□ -0.1
COL7A1-209ENST00000474432 TRDCB7Z8K6 153 aa14.42□□□□□ -0.1
COL7A1-209ENST00000474432 RAB27BO00194 218 aa14.42□□□□□ -0.1
COL7A1-209ENST00000474432 MC5RP33032 325 aa14.42□□□□□ -0.1
COL7A1-209ENST00000474432 C11orf87Q6NUJ2 197 aa14.42□□□□□ -0.1
COL7A1-209ENST00000474432 ZNF383Q8NA42 475 aa14.42□□□□□ -0.1
COL7A1-209ENST00000474432 OR11H1Q8NG94 326 aa14.42□□□□□ -0.1
COL7A1-209ENST00000474432 OR5M8Q8NGP6 311 aa14.42□□□□□ -0.1
COL7A1-209ENST00000474432 EDARADDQ8WWZ3 215 aa14.42□□□□□ -0.1
COL7A1-209ENST00000474432 RAB22AQ9UL26 194 aa14.42□□□□□ -0.1
COL7A1-209ENST00000474432 GAB2Q9UQC2 676 aa14.42□□□□□ -0.1
COL7A1-209ENST00000474432 WASHC3Q9Y3C0 194 aa14.42□□□□□ -0.1
COL7A1-209ENST00000474432 NUBP2Q9Y5Y2 271 aa14.42□□□□□ -0.1
COL7A1-209ENST00000474432 TRDV1A0A1B0GX56 115 aa14.41□□□□□ -0.1
COL7A1-209ENST00000474432 IFITM5A6NNB3 132 aa14.41□□□□□ -0.1
COL7A1-209ENST00000474432 IGKV1-16P04430 117 aa14.41□□□□□ -0.1
COL7A1-209ENST00000474432 CD3GP09693 182 aa14.41□□□□□ -0.1
COL7A1-209ENST00000474432 RAB9AP51151 201 aa14.41□□□□□ -0.1
COL7A1-209ENST00000474432 PSMD7P51665 324 aa14.41□□□□□ -0.1
COL7A1-209ENST00000474432 GNB1P62873 340 aa14.41□□□□□ -0.1
COL7A1-209ENST00000474432 DGCR2P98153 550 aa14.41□□□□□ -0.1
COL7A1-209ENST00000474432 ZNF660Q6AZW8 331 aaPredicted RBP14.41□□□□□ -0.1
COL7A1-209ENST00000474432 RDH8Q9NYR8 311 aa14.41□□□□□ -0.1
COL7A1-209ENST00000474432 KIAA1456Q9P272 454 aa14.41□□□□□ -0.1
COL7A1-209ENST00000474432 RAB26Q9ULW5 256 aa14.41□□□□□ -0.1
COL7A1-209ENST00000474432 A0A0B4J203 849 aa14.4□□□□□ -0.1
COL7A1-209ENST00000474432 ERICH4A6NGS2 130 aa14.4□□□□□ -0.1
COL7A1-209ENST00000474432 MFNGO00587 321 aa14.4□□□□□ -0.1
COL7A1-209ENST00000474432 HSPA12AO43301 675 aa14.4□□□□□ -0.1
COL7A1-209ENST00000474432 RBBP9O75884 186 aa14.4□□□□□ -0.1
COL7A1-209ENST00000474432 PSG5Q15238 335 aa14.4□□□□□ -0.1
COL7A1-209ENST00000474432 CASTOR1Q8WTX7 329 aa14.4□□□□□ -0.1
COL7A1-209ENST00000474432 RAB3CQ96E17 227 aa14.4□□□□□ -0.1
COL7A1-209ENST00000474432 C5orf30Q96GV9 206 aa14.4□□□□□ -0.1
COL7A1-209ENST00000474432 OR5B12Q96R08 314 aa14.4□□□□□ -0.1
COL7A1-209ENST00000474432 RNF5Q99942 180 aa14.4□□□□□ -0.1
COL7A1-209ENST00000474432 TPSG1Q9NRR2 321 aa14.4□□□□□ -0.1
COL7A1-209ENST00000474432 VSIG4Q9Y279 399 aa14.4□□□□□ -0.1
COL7A1-209ENST00000474432 H7C2Y5 167 aa14.39□□□□□ -0.11
COL7A1-209ENST00000474432 FCGR3AP08637 254 aa14.39□□□□□ -0.11
COL7A1-209ENST00000474432 GSTT2P0CG29 244 aa14.39□□□□□ -0.11
COL7A1-209ENST00000474432 GSTT2BP0CG30 244 aa14.39□□□□□ -0.11
COL7A1-209ENST00000474432 IGSF11Q5DX21 431 aa14.39□□□□□ -0.11
COL7A1-209ENST00000474432 C9orf66Q5T8R8 295 aa14.39□□□□□ -0.11
COL7A1-209ENST00000474432 TMEM65Q6PI78 240 aa14.39□□□□□ -0.11
COL7A1-209ENST00000474432 OR4A4PQ8NGN8 299 aa14.39□□□□□ -0.11
COL7A1-209ENST00000474432 OR1N2Q8NGR9 330 aa14.39□□□□□ -0.11
COL7A1-209ENST00000474432 OR10R2Q8NGX6 335 aa14.39□□□□□ -0.11
COL7A1-209ENST00000474432 B9D2Q9BPU9 175 aa14.39□□□□□ -0.11
COL7A1-209ENST00000474432 CABLES2Q9BTV7 478 aa14.39□□□□□ -0.11
COL7A1-209ENST00000474432 ALX4Q9H161 411 aaPredicted RBP14.39□□□□□ -0.11
COL7A1-209ENST00000474432 BLOC1S6Q9UL45 172 aa14.39□□□□□ -0.11
COL7A1-209ENST00000474432 LSM4Q9Y4Z0 139 aaKnown RBP14.39□□□□□ -0.11
COL7A1-209ENST00000474432 SEC14L6B5MCN3 397 aa14.38□□□□□ -0.11
COL7A1-209ENST00000474432 PDCD5O14737 125 aa14.38□□□□□ -0.11
COL7A1-209ENST00000474432 FABP7O15540 132 aa14.38□□□□□ -0.11
COL7A1-209ENST00000474432 GSTP1P09211 210 aaKnown RBP14.38□□□□□ -0.11
COL7A1-209ENST00000474432 GNB3P16520 340 aa14.38□□□□□ -0.11
COL7A1-209ENST00000474432 RAB6AP20340 208 aa14.38□□□□□ -0.11
COL7A1-209ENST00000474432 GABARAPL2P60520 117 aa14.38□□□□□ -0.11
COL7A1-209ENST00000474432 SSBP2P81877 361 aaPredicted RBP14.38□□□□□ -0.11
COL7A1-209ENST00000474432 ECSCRQ19T08 205 aa14.38□□□□□ -0.11
COL7A1-209ENST00000474432 UBE2UQ5VVX9 321 aa14.38□□□□□ -0.11
COL7A1-209ENST00000474432 FAM103A1Q9BTL3 118 aaKnown RBP14.38□□□□□ -0.11
COL7A1-209ENST00000474432 ZNF230Q9UIE0 474 aaPredicted RBP14.38□□□□□ -0.11
COL7A1-209ENST00000474432 ELF5Q9UKW6 265 aaPredicted RBP14.38□□□□□ -0.11
COL7A1-209ENST00000474432 IGKV1D-8A0A087WSZ0 117 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 TRBV6-7A0A0A0MS04 114 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 A0A1W2PN81 502 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 RAMP3O60896 148 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 ATP6V1G2O95670 118 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 TFAP2AP05549 437 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 HIST1H1DP16402 221 aaKnown RBP14.37□□□□□ -0.11
COL7A1-209ENST00000474432 RAB3BP20337 219 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 GALP22466 123 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 CHRNA7P36544 502 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 ZNF616Q08AN1 781 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 VAX1Q5SQQ9 334 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 C22orf42Q6IC83 251 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 ZNF562Q6V9R5 426 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 SPARTQ8N0X7 666 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 MAFIPQ8WZ33 124 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 PRR25Q96S07 402 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 CLCC1Q96S66 551 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 METTL1Q9UBP6 276 aaKnown RBP14.37□□□□□ -0.11
COL7A1-209ENST00000474432 ZNF221Q9UK13 617 aa14.37□□□□□ -0.11
COL7A1-209ENST00000474432 FOXA2Q9Y261 457 aaPredicted RBP14.37□□□□□ -0.11
COL7A1-209ENST00000474432 SORL1Q92673 2214 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms