RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 KIAA1456Q9P272 454 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 ZNF230Q9UIE0 474 aaPredicted RBP14.06□□□□□ -0.16
UPF3A-203ENST00000474056 DAPK2Q9UIK4 370 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 BET1O15155 118 aa14.05□□□□□ -0.16
UPF3A-203ENST00000474056 ATP6V0E1O15342 81 aa14.05□□□□□ -0.16
UPF3A-203ENST00000474056 ELANEP08246 267 aa14.05□□□□□ -0.16
UPF3A-203ENST00000474056 LINC00205P59089 165 aa14.05□□□□□ -0.16
UPF3A-203ENST00000474056 FOXE3Q13461 319 aa14.05□□□□□ -0.16
UPF3A-203ENST00000474056 KIR2DS1Q14954 304 aa14.05□□□□□ -0.16
UPF3A-203ENST00000474056 KCTD21Q4G0X4 260 aa14.05□□□□□ -0.16
UPF3A-203ENST00000474056 CXorf66Q5JRM2 361 aaPredicted RBP14.05□□□□□ -0.16
UPF3A-203ENST00000474056 SFXN4Q6P4A7 337 aa14.05□□□□□ -0.16
UPF3A-203ENST00000474056 ZNF695Q8IW36 515 aa14.05□□□□□ -0.16
UPF3A-203ENST00000474056 DRAXINQ8NBI3 349 aaPredicted RBP14.05□□□□□ -0.16
UPF3A-203ENST00000474056 OR5AN1Q8NGI8 311 aa14.05□□□□□ -0.16
UPF3A-203ENST00000474056 RCC1LQ96I51 464 aaKnown RBP14.05□□□□□ -0.16
UPF3A-203ENST00000474056 ZNF580Q9UK33 172 aa14.05□□□□□ -0.16
UPF3A-203ENST00000474056 WASHC3Q9Y3C0 194 aa14.05□□□□□ -0.16
UPF3A-203ENST00000474056 G3V318 75 aa14.04□□□□□ -0.16
UPF3A-203ENST00000474056 H7C2Y5 167 aa14.04□□□□□ -0.16
UPF3A-203ENST00000474056 IGHG4P01861 327 aa14.04□□□□□ -0.16
UPF3A-203ENST00000474056 CLEC2LP0C7M8 214 aa14.04□□□□□ -0.16
UPF3A-203ENST00000474056 SNRPBP14678 240 aaKnown RBP14.04□□□□□ -0.16
UPF3A-203ENST00000474056 SDC2P34741 201 aa14.04□□□□□ -0.16
UPF3A-203ENST00000474056 NDPQ00604 133 aa14.04□□□□□ -0.16
UPF3A-203ENST00000474056 MXD1Q05195 221 aa14.04□□□□□ -0.16
UPF3A-203ENST00000474056 ARFRP1Q13795 201 aa14.04□□□□□ -0.16
UPF3A-203ENST00000474056 RNF152Q8N8N0 203 aa14.04□□□□□ -0.16
UPF3A-203ENST00000474056 LGALS14Q8TCE9 139 aa14.04□□□□□ -0.16
UPF3A-203ENST00000474056 DUX3Q96PT4 197 aa14.04□□□□□ -0.16
UPF3A-203ENST00000474056 OR51J1Q9H342 316 aa14.04□□□□□ -0.16
UPF3A-203ENST00000474056 FBXL15Q9H469 300 aa14.04□□□□□ -0.16
UPF3A-203ENST00000474056 PARP11Q9NR21 331 aa14.04□□□□□ -0.16
UPF3A-203ENST00000474056 NECAP2Q9NVZ3 263 aa14.04□□□□□ -0.16
UPF3A-203ENST00000474056 AURKAIP1Q9NWT8 199 aaPredicted RBP14.04□□□□□ -0.16
UPF3A-203ENST00000474056 ZNF221Q9UK13 617 aa14.04□□□□□ -0.16
UPF3A-203ENST00000474056 IGKV1D-8A0A087WSZ0 117 aa14.03□□□□□ -0.16
UPF3A-203ENST00000474056 TRBV6-7A0A0A0MS04 114 aa14.03□□□□□ -0.16
UPF3A-203ENST00000474056 LOC100506127A0A0U1RQW1 187 aa14.03□□□□□ -0.16
UPF3A-203ENST00000474056 RRHO14718 337 aa14.03□□□□□ -0.16
UPF3A-203ENST00000474056 GSTP1P09211 210 aaKnown RBP14.03□□□□□ -0.16
UPF3A-203ENST00000474056 OR5H8P0DN80 308 aa14.03□□□□□ -0.16
UPF3A-203ENST00000474056 CD36P16671 472 aa14.03□□□□□ -0.16
UPF3A-203ENST00000474056 SLC6A1P30531 599 aa14.03□□□□□ -0.16
UPF3A-203ENST00000474056 MC5RP33032 325 aa14.03□□□□□ -0.16
UPF3A-203ENST00000474056 MYCNOSP40205 109 aa14.03□□□□□ -0.16
UPF3A-203ENST00000474056 SERPINB10P48595 397 aa14.03□□□□□ -0.16
UPF3A-203ENST00000474056 LIN54Q6MZP7 749 aa14.03□□□□□ -0.16
UPF3A-203ENST00000474056 ZNF383Q8NA42 475 aa14.03□□□□□ -0.16
UPF3A-203ENST00000474056 P2RX4Q99571 388 aa14.03□□□□□ -0.16
UPF3A-203ENST00000474056 WSB1Q9Y6I7 421 aa14.03□□□□□ -0.16
UPF3A-203ENST00000474056 RBBP9O75884 186 aa14.02□□□□□ -0.17
UPF3A-203ENST00000474056 TFAP2AP05549 437 aa14.02□□□□□ -0.17
UPF3A-203ENST00000474056 PSMB8P28062 276 aa14.02□□□□□ -0.17
UPF3A-203ENST00000474056 PPIFP30405 207 aaKnown RBP14.02□□□□□ -0.17
UPF3A-203ENST00000474056 DEFB136Q30KP8 78 aa14.02□□□□□ -0.17
UPF3A-203ENST00000474056 CDNFQ49AH0 187 aa14.02□□□□□ -0.17
UPF3A-203ENST00000474056 REC114Q7Z4M0 266 aa14.02□□□□□ -0.17
UPF3A-203ENST00000474056 OR10J5Q8NHC4 309 aa14.02□□□□□ -0.17
UPF3A-203ENST00000474056 C5orf30Q96GV9 206 aa14.02□□□□□ -0.17
UPF3A-203ENST00000474056 RAX2Q96IS3 184 aa14.02□□□□□ -0.17
UPF3A-203ENST00000474056 CENPOQ9BU64 300 aa14.02□□□□□ -0.17
UPF3A-203ENST00000474056 OR2D2Q9H210 308 aa14.02□□□□□ -0.17
UPF3A-203ENST00000474056 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.02□□□□□ -0.17
UPF3A-203ENST00000474056 FBXO7Q9Y3I1 522 aa14.02□□□□□ -0.17
UPF3A-203ENST00000474056 M0R1X1 148 aa14.01□□□□□ -0.17
UPF3A-203ENST00000474056 FCN1O00602 326 aa14.01□□□□□ -0.17
UPF3A-203ENST00000474056 DUS4LO95620 317 aaKnown RBP14.01□□□□□ -0.17
UPF3A-203ENST00000474056 DIRAS3O95661 229 aa14.01□□□□□ -0.17
UPF3A-203ENST00000474056 IGKV1-16P04430 117 aa14.01□□□□□ -0.17
UPF3A-203ENST00000474056 OR8U9P0C7N5 309 aa14.01□□□□□ -0.17
UPF3A-203ENST00000474056 TALDO1P37837 337 aa14.01□□□□□ -0.17
UPF3A-203ENST00000474056 CDX1P47902 265 aaPredicted RBP14.01□□□□□ -0.17
UPF3A-203ENST00000474056 ARL6IP1Q15041 203 aa14.01□□□□□ -0.17
UPF3A-203ENST00000474056 PLGLAQ15195 96 aa14.01□□□□□ -0.17
UPF3A-203ENST00000474056 SRSF7Q16629 238 aaKnown RBP eCLIP14.01□□□□□ -0.17
UPF3A-203ENST00000474056 Q6ZS49 121 aa14.01□□□□□ -0.17
UPF3A-203ENST00000474056 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.01□□□□□ -0.17
UPF3A-203ENST00000474056 OR8U1Q8NH10 309 aa14.01□□□□□ -0.17
UPF3A-203ENST00000474056 SDHAF2Q9NX18 166 aa14.01□□□□□ -0.17
UPF3A-203ENST00000474056 TRAV41A0A0B4J266 112 aa14□□□□□ -0.17
UPF3A-203ENST00000474056 TMEM235A6NFC5 223 aa14□□□□□ -0.17
UPF3A-203ENST00000474056 DTYMKP23919 212 aa14□□□□□ -0.17
UPF3A-203ENST00000474056 CX3CL1P78423 397 aa14□□□□□ -0.17
UPF3A-203ENST00000474056 ECSCRQ19T08 205 aa14□□□□□ -0.17
UPF3A-203ENST00000474056 ZNF260Q3ZCT1 412 aa14□□□□□ -0.17
UPF3A-203ENST00000474056 PDPNQ86YL7 162 aa14□□□□□ -0.17
UPF3A-203ENST00000474056 OR5H6Q8NGV6 325 aa14□□□□□ -0.17
UPF3A-203ENST00000474056 MRAPQ8TCY5 172 aa14□□□□□ -0.17
UPF3A-203ENST00000474056 MYOZ3Q8TDC0 251 aa14□□□□□ -0.17
UPF3A-203ENST00000474056 NUDCD2Q8WVJ2 157 aa14□□□□□ -0.17
UPF3A-203ENST00000474056 RNF5Q99942 180 aa14□□□□□ -0.17
UPF3A-203ENST00000474056 GINS4Q9BRT9 223 aa14□□□□□ -0.17
UPF3A-203ENST00000474056 KLK15Q9H2R5 256 aa14□□□□□ -0.17
UPF3A-203ENST00000474056 SLC35D1Q9NTN3 355 aa14□□□□□ -0.17
UPF3A-203ENST00000474056 RHBDL2Q9NX52 303 aa14□□□□□ -0.17
UPF3A-203ENST00000474056 TNCP24821 2201 aa14□□□□□ -0.17
UPF3A-203ENST00000474056 CCL24O00175 119 aa13.99□□□□□ -0.17
UPF3A-203ENST00000474056 APOA2P02652 100 aa13.99□□□□□ -0.17
UPF3A-203ENST00000474056 TGFBR1P36897 503 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms