RNA–Protein interactions for RNA: ENST00000472524.1

CCDC88B-205, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 779 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-205ENST00000472524 MOGAT2Q3SYC2 334 aa12.26□□□□□ -0.45
CCDC88B-205ENST00000472524 DRAXINQ8NBI3 349 aaPredicted RBP12.26□□□□□ -0.45
CCDC88B-205ENST00000472524 OR5M8Q8NGP6 311 aa12.26□□□□□ -0.45
CCDC88B-205ENST00000472524 ABHD5Q8WTS1 349 aa12.26□□□□□ -0.45
CCDC88B-205ENST00000472524 CHCHD6Q9BRQ6 235 aa12.26□□□□□ -0.45
CCDC88B-205ENST00000472524 AGMATQ9BSE5 352 aa12.26□□□□□ -0.45
CCDC88B-205ENST00000472524 KLK15Q9H2R5 256 aa12.26□□□□□ -0.45
CCDC88B-205ENST00000472524 GNB4Q9HAV0 340 aa12.26□□□□□ -0.45
CCDC88B-205ENST00000472524 NDUFB11Q9NX14 153 aa12.26□□□□□ -0.45
CCDC88B-205ENST00000472524 WASHC3Q9Y3C0 194 aa12.26□□□□□ -0.45
CCDC88B-205ENST00000472524 SORL1Q92673 2214 aa12.26□□□□□ -0.45
CCDC88B-205ENST00000472524 A0A075B6Q4 140 aa12.25□□□□□ -0.45
CCDC88B-205ENST00000472524 TRAV1-2A0A0B4J238 106 aa12.25□□□□□ -0.45
CCDC88B-205ENST00000472524 IGKV1-6A0A0C4DH72 117 aa12.25□□□□□ -0.45
CCDC88B-205ENST00000472524 TRDCB7Z8K6 153 aa12.25□□□□□ -0.45
CCDC88B-205ENST00000472524 MC5RP33032 325 aa12.25□□□□□ -0.45
CCDC88B-205ENST00000472524 LUMP51884 338 aaPredicted RBP12.25□□□□□ -0.45
CCDC88B-205ENST00000472524 CD69Q07108 199 aa12.25□□□□□ -0.45
CCDC88B-205ENST00000472524 RAB3CQ96E17 227 aa12.25□□□□□ -0.45
CCDC88B-205ENST00000472524 OR5B12Q96R08 314 aa12.25□□□□□ -0.45
CCDC88B-205ENST00000472524 GHITMQ9H3K2 345 aa12.25□□□□□ -0.45
CCDC88B-205ENST00000472524 ZNF221Q9UK13 617 aa12.25□□□□□ -0.45
CCDC88B-205ENST00000472524 FBXO7Q9Y3I1 522 aa12.25□□□□□ -0.45
CCDC88B-205ENST00000472524 A3GALT2U3KPV4 340 aa12.25□□□□□ -0.45
CCDC88B-205ENST00000472524 A0A0B4J203 849 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 A0A1W2PN81 502 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 SMIM30A4D0T7 59 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 ATP6V1G2O95670 118 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 RAB3BP20337 219 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 CHRNA7P36544 502 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 LINC00205P59089 165 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 GABARAPL2P60520 117 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 C22orf42Q6IC83 251 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 ZNF491Q8N8L2 437 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 OR11H1Q8NG94 326 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 OR5AN1Q8NGI8 311 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 MYOZ3Q8TDC0 251 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 PTX4Q96A99 478 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 CLCC1Q96S66 551 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 B9D2Q9BPU9 175 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 RDH8Q9NYR8 311 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 KCNK7Q9Y2U2 307 aa12.24□□□□□ -0.45
CCDC88B-205ENST00000472524 TRDV1A0A1B0GX56 115 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 IFITM5A6NNB3 132 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 FCN1O00602 326 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 BET1O15155 118 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 FABP7O15540 132 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 RBBP9O75884 186 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 IGLV1-40P01703 118 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 FCGR3AP08637 254 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 GNB3P16520 340 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 GADD45AP24522 165 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 CX3CL1P78423 397 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 DGCR2P98153 550 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 C9orf66Q5T8R8 295 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 ZNF660Q6AZW8 331 aaPredicted RBP12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 CD200R1LQ6Q8B3 271 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 OR4A4PQ8NGN8 299 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 OR10R2Q8NGX6 335 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 CASTOR1Q8WTX7 329 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 MAFIPQ8WZ33 124 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 UBE2E2Q96LR5 201 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 METTL1Q9UBP6 276 aaKnown RBP12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 VSIG4Q9Y279 399 aa12.23□□□□□ -0.45
CCDC88B-205ENST00000472524 SEC14L6B5MCN3 397 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 M0R1X1 148 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 MFNGO00587 321 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 PROP1O75360 226 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 APOA2P02652 100 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 TFAP2AP05549 437 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 SNRPBP14678 240 aaKnown RBP12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 RAB6AP20340 208 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 PSMB9P28065 219 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 RAB9AP51151 201 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 RPS16P62249 146 aaKnown RBP12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 GNB1P62873 340 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 FHL3Q13643 280 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 KIAA0141Q14154 515 aaPredicted RBP12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 IGSF11Q5DX21 431 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 ZNF383Q8NA42 475 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 MINDY2Q8NBR6 621 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 WWC2-AS2Q96NR7 200 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 FAM103A1Q9BTL3 118 aaKnown RBP12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 OR2D2Q9H210 308 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 ZMAT5Q9UDW3 170 aaKnown RBP12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 ZNF230Q9UIE0 474 aaPredicted RBP12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 GAB2Q9UQC2 676 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 FOXA2Q9Y261 457 aaPredicted RBP12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 TNCP24821 2201 aa12.22□□□□□ -0.45
CCDC88B-205ENST00000472524 I3L521 148 aa12.21□□□□□ -0.45
CCDC88B-205ENST00000472524 SOX15O60248 233 aa12.21□□□□□ -0.45
CCDC88B-205ENST00000472524 CA2P00918 260 aa12.21□□□□□ -0.45
CCDC88B-205ENST00000472524 IGKV1-16P04430 117 aa12.21□□□□□ -0.45
CCDC88B-205ENST00000472524 OR8U9P0C7N5 309 aa12.21□□□□□ -0.45
CCDC88B-205ENST00000472524 GSTT2P0CG29 244 aa12.21□□□□□ -0.45
CCDC88B-205ENST00000472524 GSTT2BP0CG30 244 aa12.21□□□□□ -0.45
CCDC88B-205ENST00000472524 HIST1H1DP16402 221 aaKnown RBP12.21□□□□□ -0.45
CCDC88B-205ENST00000472524 SERPINB10P48595 397 aa12.21□□□□□ -0.45
CCDC88B-205ENST00000472524 ZNF616Q08AN1 781 aa12.21□□□□□ -0.45
CCDC88B-205ENST00000472524 PSG5Q15238 335 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms