RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 UBALD1Q8TB05 177 aa2.98□□□□□ -1.93
COL9A1-206ENST00000470652 C12orf43Q96C57 262 aaKnown RBP2.98□□□□□ -1.93
COL9A1-206ENST00000470652 ISOC1Q96CN7 298 aa2.98□□□□□ -1.93
COL9A1-206ENST00000470652 RNF170Q96K19 258 aa2.98□□□□□ -1.93
COL9A1-206ENST00000470652 CCL19Q99731 98 aa2.98□□□□□ -1.93
COL9A1-206ENST00000470652 NICN1Q9BSH3 213 aa2.98□□□□□ -1.93
COL9A1-206ENST00000470652 CHST5Q9GZS9 411 aa2.98□□□□□ -1.93
COL9A1-206ENST00000470652 COMMD4Q9H0A8 199 aa2.98□□□□□ -1.93
COL9A1-206ENST00000470652 OR51I2Q9H344 312 aa2.98□□□□□ -1.93
COL9A1-206ENST00000470652 ZNF442Q9H7R0 627 aa2.98□□□□□ -1.93
COL9A1-206ENST00000470652 PLEKHA1Q9HB21 404 aa2.98□□□□□ -1.93
COL9A1-206ENST00000470652 TMEM100Q9NV29 134 aa2.98□□□□□ -1.93
COL9A1-206ENST00000470652 C1orf123Q9NWV4 160 aa2.98□□□□□ -1.93
COL9A1-206ENST00000470652 MTCH1Q9NZJ7 389 aa2.98□□□□□ -1.93
COL9A1-206ENST00000470652 ATPIF1Q9UII2 106 aa2.98□□□□□ -1.93
COL9A1-206ENST00000470652 ACANP16112 2415 aa2.98□□□□□ -1.93
COL9A1-206ENST00000470652 TEX15Q9BXT5 2789 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 CUBNO60494 3623 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 TRAV9-2A0A087WT02 112 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 ANKRD30BLA7E2S9 258 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 RNF212BA8MTL3 300 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 SULT1B1O43704 296 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 MRPS14O60783 128 aaKnown RBP2.97□□□□□ -1.93
COL9A1-206ENST00000470652 RP2O75695 350 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 PTBP3O95758 552 aaKnown RBP2.97□□□□□ -1.93
COL9A1-206ENST00000470652 GYPAP02724 150 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 SRMP19623 302 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 SERPINA2P20848 420 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 GLRA1P23415 457 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 RPL5P46777 297 aaKnown RBP2.97□□□□□ -1.93
COL9A1-206ENST00000470652 HAAOP46952 286 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 TAS2R43P59537 309 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 LYZP61626 148 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 SNRPD2P62316 118 aaKnown RBP2.97□□□□□ -1.93
COL9A1-206ENST00000470652 UNC119Q13432 240 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 MEF2DQ14814 521 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 ZMYND11Q15326 602 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 KISS1Q15726 138 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 CNPY1Q3B7I2 92 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 SLC22A6Q4U2R8 563 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 CCDC58Q4VC31 144 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 CLVS2Q5SYC1 327 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 IDNKQ5T6J7 187 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 PAMR1Q6UXH9 720 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 WDR82Q6UXN9 313 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 SNX29P2Q8IUI4 249 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 FAM216BQ8N7L0 139 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 TPRX1Q8N7U7 411 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 WFDC11Q8NEX6 87 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 OR51D1Q8NGF3 324 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 OR5L1Q8NGL2 311 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 OR8S1Q8NH09 359 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 LGALS14Q8TCE9 139 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 LRRC29Q8WV35 223 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 TNFAIP8L1Q8WVP5 186 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 AQP3Q92482 292 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 CCL17Q92583 94 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 FCGR1BQ92637 280 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 RAB40CQ96S21 281 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 SSX3Q99909 188 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 SMR3AQ99954 134 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 HDHD3Q9BSH5 251 aaPredicted RBP2.97□□□□□ -1.93
COL9A1-206ENST00000470652 BCL2L14Q9BZR8 327 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 CHST6Q9GZX3 395 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 DCSTAMPQ9H295 470 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 MIXL1Q9H2W2 232 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 LPAR2Q9HBW0 351 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 NEK6Q9HC98 313 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 NGBQ9NPG2 151 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 ISYNA1Q9NPH2 558 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 CBLN4Q9NTU7 201 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 ING4Q9UNL4 249 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 SOX21Q9Y651 276 aaPredicted RBP2.97□□□□□ -1.93
COL9A1-206ENST00000470652 FLNAP21333 2647 aaKnown RBP2.97□□□□□ -1.93
COL9A1-206ENST00000470652 NAV2Q8IVL1 2488 aa2.97□□□□□ -1.93
COL9A1-206ENST00000470652 A0A075B6Q4 140 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 IGKV1D-17A0A075B6S4 117 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 A0A1B0GWJ7 208 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 ISPDA4D126 451 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 MEIS3P1A6NDR6 274 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 SIRPB1O00241 398 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 SOCS1O15524 211 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 HPGDSO60760 199 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 LY6G6DO95868 133 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 EIF4EP06730 217 aaKnown RBP2.96□□□□□ -1.94
COL9A1-206ENST00000470652 PRKACAP17612 351 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 RAB3AP20336 220 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 GABRR1P24046 479 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 PSMA1P25786 263 aaKnown RBP2.96□□□□□ -1.94
COL9A1-206ENST00000470652 PAX6P26367 422 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 HTR2CP28335 458 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 FGF9P31371 208 aaPredicted RBP2.96□□□□□ -1.94
COL9A1-206ENST00000470652 ZNF93P35789 620 aaPredicted RBP2.96□□□□□ -1.94
COL9A1-206ENST00000470652 CD200P41217 278 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 ATP5J2P56134 94 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 GNG3P63215 75 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 QRFPP83859 136 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 BDH1Q02338 343 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 PDZK1IP1Q13113 114 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 TAF9Q16594 264 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms