RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 H0Y980 276 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 HSD17B6O14756 317 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 ST8SIA5O15466 376 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 RBFOX2O43251 390 aaKnown RBP eCLIP10.4□□□□□ -0.74
TRAF4-208ENST00000469529 OR2A4O95047 310 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 MMP9P14780 707 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 RPA2P15927 270 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 GPR12P47775 334 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 ARF6P62330 175 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 TAGLNQ01995 201 aaKnown RBP10.4□□□□□ -0.74
TRAF4-208ENST00000469529 SRSF4Q08170 494 aaKnown RBP10.4□□□□□ -0.74
TRAF4-208ENST00000469529 UTF1Q5T230 341 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 BTNL3Q6UXE8 466 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 ZNF833PQ6ZTB9 187 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 TBC1D26Q86UD7 250 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 COQ8AQ8NI60 647 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 CD300LFQ8TDQ1 290 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 PPP1R14BQ96C90 147 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 MSI2Q96DH6 328 aaKnown RBP10.4□□□□□ -0.74
TRAF4-208ENST00000469529 OR2A7Q96R45 310 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 NEURL2Q9BR09 285 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 CLEC7AQ9BXN2 247 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 MMP26Q9NRE1 261 aa10.4□□□□□ -0.74
TRAF4-208ENST00000469529 KIAA2026Q5HYC2 2103 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 IGHV2-26A0A0B4J1V2 119 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 TRAV20A0A0B4J274 112 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 DUXBA0A1W2PPF3 345 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 LY6LH3BQJ8 138 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 SLC31A2O15432 143 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 CD99P14209 185 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 VAMP1P23763 118 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 DUTP33316 252 aaKnown RBP10.39□□□□□ -0.75
TRAF4-208ENST00000469529 DVL1P1P54792 670 aaPredicted RBP10.39□□□□□ -0.75
TRAF4-208ENST00000469529 LCN2P80188 198 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 CBX3Q13185 183 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 LTC4SQ16873 150 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 PHLDA2Q53GA4 152 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 Q5PR19 223 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 NCR3LG1Q68D85 454 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 LIAT1Q6ZQX7 453 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 OR52B4Q8NGK2 314 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 C5orf30Q96GV9 206 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 ABHD14BQ96IU4 210 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 S1PR3Q99500 378 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 TMUB1Q9BVT8 246 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 REG4Q9BYZ8 158 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 RAB18Q9NP72 206 aa10.39□□□□□ -0.75
TRAF4-208ENST00000469529 DSCAML1Q8TD84 2053 aa10.38□□□□□ -0.75
TRAF4-208ENST00000469529 TOR1AO14656 332 aa10.38□□□□□ -0.75
TRAF4-208ENST00000469529 SSNA1O43805 119 aa10.38□□□□□ -0.75
TRAF4-208ENST00000469529 MSMBP08118 114 aa10.38□□□□□ -0.75
TRAF4-208ENST00000469529 IL3RAP26951 378 aa10.38□□□□□ -0.75
TRAF4-208ENST00000469529 CATR1Q13166 79 aa10.38□□□□□ -0.75
TRAF4-208ENST00000469529 FCN2Q15485 313 aa10.38□□□□□ -0.75
TRAF4-208ENST00000469529 HLA-DRB5Q30154 266 aa10.38□□□□□ -0.75
TRAF4-208ENST00000469529 ANKRD55Q3KP44 614 aa10.38□□□□□ -0.75
TRAF4-208ENST00000469529 HCP5Q6MZN7 132 aa10.38□□□□□ -0.75
TRAF4-208ENST00000469529 LGI3Q8N145 548 aa10.38□□□□□ -0.75
TRAF4-208ENST00000469529 LINC01356Q8N9X3 169 aa10.38□□□□□ -0.75
TRAF4-208ENST00000469529 DDB2Q92466 427 aa10.38□□□□□ -0.75
TRAF4-208ENST00000469529 PCGF1Q9BSM1 259 aa10.38□□□□□ -0.75
TRAF4-208ENST00000469529 LIN7CQ9NUP9 197 aaKnown RBP10.38□□□□□ -0.75
TRAF4-208ENST00000469529 ONECUT1Q9UBC0 465 aa10.38□□□□□ -0.75
TRAF4-208ENST00000469529 ITPR3Q14573 2671 aa10.38□□□□□ -0.75
TRAF4-208ENST00000469529 hCG_2014768A0A024R1R8 64 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 SAA2-SAA4A0A096LPE2 208 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 ODF3BA8MYP8 253 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 OOSP1A8MZH6 123 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 BUB1B-PAK6H3BSN5 160 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 J3QLI3 93 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 OR5AC1P0C628 307 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 SAA2P0DJI9 122 aaPredicted RBP10.37□□□□□ -0.75
TRAF4-208ENST00000469529 KIR2DS2P43631 304 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 THBS3P49746 956 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 UBE2E1P51965 193 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 RIPPLY3P57055 190 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 BRWD1-AS2P59051 145 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 ZNF585BQ52M93 769 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 C1orf229Q6ZS94 237 aaPredicted RBP10.37□□□□□ -0.75
TRAF4-208ENST00000469529 LYG1Q8N1E2 194 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 OR11H7Q8NGC8 314 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 OR4P4Q8NGL7 312 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 LEAP2Q969E1 77 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 C18orf12Q96KH6 178 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 TP53RKQ96S44 253 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 KCNS2Q9ULS6 477 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 TMED3Q9Y3Q3 217 aa10.37□□□□□ -0.75
TRAF4-208ENST00000469529 AMMECR1Q9Y4X0 333 aaPredicted RBP10.37□□□□□ -0.75
TRAF4-208ENST00000469529 TXNL1O43396 289 aa10.36□□□□□ -0.75
TRAF4-208ENST00000469529 TOX4O94842 621 aa10.36□□□□□ -0.75
TRAF4-208ENST00000469529 CT45A6P0DMU7 189 aa10.36□□□□□ -0.75
TRAF4-208ENST00000469529 CT45A5P0DMU8 189 aa10.36□□□□□ -0.75
TRAF4-208ENST00000469529 CT45A7P0DMV0 189 aa10.36□□□□□ -0.75
TRAF4-208ENST00000469529 CXCL3P19876 107 aa10.36□□□□□ -0.75
TRAF4-208ENST00000469529 ARHGDIBP52566 201 aa10.36□□□□□ -0.75
TRAF4-208ENST00000469529 RPL30P62888 115 aaKnown RBP10.36□□□□□ -0.75
TRAF4-208ENST00000469529 CYCSP99999 105 aaKnown RBP10.36□□□□□ -0.75
TRAF4-208ENST00000469529 ZNF816Q0VGE8 651 aaPredicted RBP10.36□□□□□ -0.75
TRAF4-208ENST00000469529 SLC9A3R2Q15599 337 aa10.36□□□□□ -0.75
TRAF4-208ENST00000469529 MINOS1Q5TGZ0 78 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms