RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 OXLD1Q5BKU9 147 aa12.14□□□□□ -0.47
VARS-219ENST00000461328 KPRPQ5T749 579 aaPredicted RBP12.14□□□□□ -0.47
VARS-219ENST00000461328 HACD4Q5VWC8 232 aa12.14□□□□□ -0.47
VARS-219ENST00000461328 FAM71E2Q8N5Q1 922 aa12.14□□□□□ -0.47
VARS-219ENST00000461328 OR5H6Q8NGV6 325 aa12.14□□□□□ -0.47
VARS-219ENST00000461328 YIPF6Q96EC8 236 aa12.14□□□□□ -0.47
VARS-219ENST00000461328 HSPB9Q9BQS6 159 aa12.14□□□□□ -0.47
VARS-219ENST00000461328 AGMATQ9BSE5 352 aa12.14□□□□□ -0.47
VARS-219ENST00000461328 ST6GALNAC5Q9BVH7 336 aa12.14□□□□□ -0.47
VARS-219ENST00000461328 OR2D2Q9H210 308 aa12.14□□□□□ -0.47
VARS-219ENST00000461328 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.14□□□□□ -0.47
VARS-219ENST00000461328 WASHC3Q9Y3C0 194 aa12.14□□□□□ -0.47
VARS-219ENST00000461328 PLXNB1O43157 2135 aa12.14□□□□□ -0.47
VARS-219ENST00000461328 LINC01548A6NM66 108 aa12.13□□□□□ -0.47
VARS-219ENST00000461328 H0YJW9 148 aa12.13□□□□□ -0.47
VARS-219ENST00000461328 M0R1X1 148 aa12.13□□□□□ -0.47
VARS-219ENST00000461328 APOA2P02652 100 aa12.13□□□□□ -0.47
VARS-219ENST00000461328 TFAP2AP05549 437 aa12.13□□□□□ -0.47
VARS-219ENST00000461328 OR8U9P0C7N5 309 aa12.13□□□□□ -0.47
VARS-219ENST00000461328 VDAC1P21796 283 aa12.13□□□□□ -0.47
VARS-219ENST00000461328 CNTFRP26992 372 aa12.13□□□□□ -0.47
VARS-219ENST00000461328 MC5RP33032 325 aa12.13□□□□□ -0.47
VARS-219ENST00000461328 PITPNAQ00169 270 aa12.13□□□□□ -0.47
VARS-219ENST00000461328 CROCCP3Q8IVE0 287 aa12.13□□□□□ -0.47
VARS-219ENST00000461328 DRAXINQ8NBI3 349 aaPredicted RBP12.13□□□□□ -0.47
VARS-219ENST00000461328 OR8U1Q8NH10 309 aa12.13□□□□□ -0.47
VARS-219ENST00000461328 GON7Q9BXV9 100 aa12.13□□□□□ -0.47
VARS-219ENST00000461328 TRBV6-7A0A0A0MS04 114 aa12.12□□□□□ -0.47
VARS-219ENST00000461328 NUDT19A8MXV4 375 aa12.12□□□□□ -0.47
VARS-219ENST00000461328 DIRAS3O95661 229 aa12.12□□□□□ -0.47
VARS-219ENST00000461328 SRSF7Q16629 238 aaKnown RBP eCLIP12.12□□□□□ -0.47
VARS-219ENST00000461328 COMMD1Q8N668 190 aa12.12□□□□□ -0.47
VARS-219ENST00000461328 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.12□□□□□ -0.47
VARS-219ENST00000461328 SLC25A38Q96DW6 304 aa12.12□□□□□ -0.47
VARS-219ENST00000461328 RITA1Q96K30 269 aa12.12□□□□□ -0.47
VARS-219ENST00000461328 PARP11Q9NR21 331 aa12.12□□□□□ -0.47
VARS-219ENST00000461328 DIABLOQ9NR28 239 aa12.12□□□□□ -0.47
VARS-219ENST00000461328 TRAV18A0A075B6X5 111 aa12.11□□□□□ -0.47
VARS-219ENST00000461328 IGKV1D-8A0A087WSZ0 117 aa12.11□□□□□ -0.47
VARS-219ENST00000461328 TMEM127O75204 238 aa12.11□□□□□ -0.47
VARS-219ENST00000461328 RBBP9O75884 186 aa12.11□□□□□ -0.47
VARS-219ENST00000461328 PNLIPRP3Q17RR3 467 aa12.11□□□□□ -0.47
VARS-219ENST00000461328 C5orf64Q2M2E5 130 aa12.11□□□□□ -0.47
VARS-219ENST00000461328 ZNF260Q3ZCT1 412 aa12.11□□□□□ -0.47
VARS-219ENST00000461328 TEX38Q6PEX7 206 aa12.11□□□□□ -0.47
VARS-219ENST00000461328 Q6ZS49 121 aa12.11□□□□□ -0.47
VARS-219ENST00000461328 DCSTAMPQ9H295 470 aa12.11□□□□□ -0.47
VARS-219ENST00000461328 SPATA2Q9UM82 520 aa12.11□□□□□ -0.47
VARS-219ENST00000461328 A0A0A6YYH2 397 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 A6NJ64 397 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 TRIM64CA6NLI5 447 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 HLA-DRB1P01911 266 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 PRB2P02812 416 aaPredicted RBP12.1□□□□□ -0.47
VARS-219ENST00000461328 CTXN2P0C2S0 81 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 IGLL1P15814 213 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 RPL23AP62750 156 aaKnown RBP12.1□□□□□ -0.47
VARS-219ENST00000461328 CBX3Q13185 183 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 CXorf66Q5JRM2 361 aaPredicted RBP12.1□□□□□ -0.47
VARS-219ENST00000461328 LIN54Q6MZP7 749 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 REC114Q7Z4M0 266 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 ZNF383Q8NA42 475 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 KLHL30-AS1Q8NEE0 82 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 WFDC9Q8NEX5 89 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 NPBQ8NG41 125 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 OR5AN1Q8NGI8 311 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 ABHD5Q8WTS1 349 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 FUNDC2Q9BWH2 189 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 TOLLIPQ9H0E2 274 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 FBXL15Q9H469 300 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 SLC35D1Q9NTN3 355 aa12.1□□□□□ -0.47
VARS-219ENST00000461328 J3QRK9 145 aa12.09□□□□□ -0.47
VARS-219ENST00000461328 RRHO14718 337 aa12.09□□□□□ -0.47
VARS-219ENST00000461328 NDUFA3O95167 84 aa12.09□□□□□ -0.47
VARS-219ENST00000461328 OR5H8P0DN80 308 aa12.09□□□□□ -0.47
VARS-219ENST00000461328 RPS19P39019 145 aaKnown RBP12.09□□□□□ -0.47
VARS-219ENST00000461328 ARPC4P59998 168 aa12.09□□□□□ -0.47
VARS-219ENST00000461328 NCS1P62166 190 aa12.09□□□□□ -0.47
VARS-219ENST00000461328 RPS16P62249 146 aaKnown RBP12.09□□□□□ -0.47
VARS-219ENST00000461328 PDPNQ86YL7 162 aa12.09□□□□□ -0.47
VARS-219ENST00000461328 H1FOOQ8IZA3 346 aaPredicted RBP12.09□□□□□ -0.47
VARS-219ENST00000461328 TSNAXQ99598 290 aaKnown RBP12.09□□□□□ -0.47
VARS-219ENST00000461328 OR51J1Q9H342 316 aa12.09□□□□□ -0.47
VARS-219ENST00000461328 ZFP57Q9NU63 452 aa12.09□□□□□ -0.47
VARS-219ENST00000461328 NECAP2Q9NVZ3 263 aa12.09□□□□□ -0.47
VARS-219ENST00000461328 SDHAF2Q9NX18 166 aa12.09□□□□□ -0.47
VARS-219ENST00000461328 TGP01266 2768 aa12.08□□□□□ -0.48
VARS-219ENST00000461328 ATP6V0E1O15342 81 aa12.08□□□□□ -0.48
VARS-219ENST00000461328 SSX5O60225 188 aa12.08□□□□□ -0.48
VARS-219ENST00000461328 SMIM18P0DKX4 95 aa12.08□□□□□ -0.48
VARS-219ENST00000461328 NFYAP23511 347 aaPredicted RBP12.08□□□□□ -0.48
VARS-219ENST00000461328 LINC00205P59089 165 aa12.08□□□□□ -0.48
VARS-219ENST00000461328 VBP1P61758 197 aa12.08□□□□□ -0.48
VARS-219ENST00000461328 UBE2NLQ5JXB2 153 aa12.08□□□□□ -0.48
VARS-219ENST00000461328 CNIH2Q6PI25 160 aa12.08□□□□□ -0.48
VARS-219ENST00000461328 SAMD12Q8N8I0 201 aa12.08□□□□□ -0.48
VARS-219ENST00000461328 OR13F1Q8NGS4 319 aa12.08□□□□□ -0.48
VARS-219ENST00000461328 FLYWCH2Q96CP2 140 aaKnown RBP12.08□□□□□ -0.48
VARS-219ENST00000461328 CLCC1Q96S66 551 aa12.08□□□□□ -0.48
VARS-219ENST00000461328 RNF5Q99942 180 aa12.08□□□□□ -0.48
VARS-219ENST00000461328 METTL1Q9UBP6 276 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms