RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 H0YJW9 148 aa16.63■□□□□ 0.25
HMGB3-205ENST00000455596 H7C2Y5 167 aa16.63■□□□□ 0.25
HMGB3-205ENST00000455596 ATP6V0E1O15342 81 aa16.63■□□□□ 0.25
HMGB3-205ENST00000455596 FABP7O15540 132 aa16.63■□□□□ 0.25
HMGB3-205ENST00000455596 GSTP1P09211 210 aaKnown RBP16.63■□□□□ 0.25
HMGB3-205ENST00000455596 HIST1H1DP16402 221 aaKnown RBP16.63■□□□□ 0.25
HMGB3-205ENST00000455596 CDX1P47902 265 aaPredicted RBP16.63■□□□□ 0.25
HMGB3-205ENST00000455596 ZNF773Q6PK81 442 aa16.63■□□□□ 0.25
HMGB3-205ENST00000455596 LCNL1Q6ZST4 164 aa16.63■□□□□ 0.25
HMGB3-205ENST00000455596 TPRA1Q86W33 373 aa16.63■□□□□ 0.25
HMGB3-205ENST00000455596 OR5AN1Q8NGI8 311 aa16.63■□□□□ 0.25
HMGB3-205ENST00000455596 P2RX4Q99571 388 aa16.63■□□□□ 0.25
HMGB3-205ENST00000455596 GPR61Q9BZJ8 451 aa16.63■□□□□ 0.25
HMGB3-205ENST00000455596 ATG5Q9H1Y0 275 aa16.63■□□□□ 0.25
HMGB3-205ENST00000455596 RNF150Q9ULK6 438 aa16.63■□□□□ 0.25
HMGB3-205ENST00000455596 NOTOA8MTQ0 251 aa16.62■□□□□ 0.25
HMGB3-205ENST00000455596 RBBP9O75884 186 aa16.62■□□□□ 0.25
HMGB3-205ENST00000455596 ARFRP1Q13795 201 aa16.62■□□□□ 0.25
HMGB3-205ENST00000455596 TOLLIPQ9H0E2 274 aa16.62■□□□□ 0.25
HMGB3-205ENST00000455596 PARP11Q9NR21 331 aa16.62■□□□□ 0.25
HMGB3-205ENST00000455596 RRHO14718 337 aa16.61■□□□□ 0.25
HMGB3-205ENST00000455596 GSTT2P0CG29 244 aa16.61■□□□□ 0.25
HMGB3-205ENST00000455596 GSTT2BP0CG30 244 aa16.61■□□□□ 0.25
HMGB3-205ENST00000455596 PSMB8P28062 276 aa16.61■□□□□ 0.25
HMGB3-205ENST00000455596 ARL6IP1Q15041 203 aa16.61■□□□□ 0.25
HMGB3-205ENST00000455596 PLGLAQ15195 96 aa16.61■□□□□ 0.25
HMGB3-205ENST00000455596 DRAXINQ8NBI3 349 aaPredicted RBP16.61■□□□□ 0.25
HMGB3-205ENST00000455596 OR10J5Q8NHC4 309 aa16.61■□□□□ 0.25
HMGB3-205ENST00000455596 DUX3Q96PT4 197 aa16.61■□□□□ 0.25
HMGB3-205ENST00000455596 RNF5Q99942 180 aa16.61■□□□□ 0.25
HMGB3-205ENST00000455596 CABLES2Q9BTV7 478 aa16.61■□□□□ 0.25
HMGB3-205ENST00000455596 MCRIP2Q9BUT9 160 aaKnown RBP16.61■□□□□ 0.25
HMGB3-205ENST00000455596 WSB1Q9Y6I7 421 aa16.61■□□□□ 0.25
HMGB3-205ENST00000455596 CCL24O00175 119 aa16.6■□□□□ 0.25
HMGB3-205ENST00000455596 BET1O15155 118 aa16.6■□□□□ 0.25
HMGB3-205ENST00000455596 PROP1O75360 226 aa16.6■□□□□ 0.25
HMGB3-205ENST00000455596 DIRAS3O95661 229 aa16.6■□□□□ 0.25
HMGB3-205ENST00000455596 PPIFP30405 207 aaKnown RBP16.6■□□□□ 0.25
HMGB3-205ENST00000455596 TALDO1P37837 337 aa16.6■□□□□ 0.25
HMGB3-205ENST00000455596 IGSF11Q5DX21 431 aa16.6■□□□□ 0.25
HMGB3-205ENST00000455596 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.6■□□□□ 0.25
HMGB3-205ENST00000455596 OR8U1Q8NH10 309 aa16.6■□□□□ 0.25
HMGB3-205ENST00000455596 DPF1Q92782 380 aa16.6■□□□□ 0.25
HMGB3-205ENST00000455596 RAX2Q96IS3 184 aa16.6■□□□□ 0.25
HMGB3-205ENST00000455596 OR51E2Q9H255 320 aa16.6■□□□□ 0.25
HMGB3-205ENST00000455596 FBXL15Q9H469 300 aa16.6■□□□□ 0.25
HMGB3-205ENST00000455596 ZNF230Q9UIE0 474 aaPredicted RBP16.6■□□□□ 0.25
HMGB3-205ENST00000455596 TRAV41A0A0B4J266 112 aa16.59■□□□□ 0.25
HMGB3-205ENST00000455596 G3V318 75 aa16.59■□□□□ 0.25
HMGB3-205ENST00000455596 TFAP2AP05549 437 aa16.59■□□□□ 0.25
HMGB3-205ENST00000455596 SRSF7Q16629 238 aaKnown RBP eCLIP16.59■□□□□ 0.25
HMGB3-205ENST00000455596 ZNF660Q6AZW8 331 aaPredicted RBP16.59■□□□□ 0.25
HMGB3-205ENST00000455596 TMEM65Q6PI78 240 aa16.59■□□□□ 0.25
HMGB3-205ENST00000455596 C4orf3Q8WVX3 66 aa16.59■□□□□ 0.25
HMGB3-205ENST00000455596 MAFIPQ8WZ33 124 aa16.59■□□□□ 0.25
HMGB3-205ENST00000455596 CENPOQ9BU64 300 aa16.59■□□□□ 0.25
HMGB3-205ENST00000455596 DAPK2Q9UIK4 370 aa16.59■□□□□ 0.25
HMGB3-205ENST00000455596 TGP01266 2768 aa16.58■□□□□ 0.25
HMGB3-205ENST00000455596 TRBV6-7A0A0A0MS04 114 aa16.58■□□□□ 0.24
HMGB3-205ENST00000455596 APOA2P02652 100 aa16.58■□□□□ 0.24
HMGB3-205ENST00000455596 RAB25P57735 213 aa16.58■□□□□ 0.24
HMGB3-205ENST00000455596 DEFB136Q30KP8 78 aa16.58■□□□□ 0.24
HMGB3-205ENST00000455596 PDPNQ86YL7 162 aa16.58■□□□□ 0.24
HMGB3-205ENST00000455596 ZNF383Q8NA42 475 aa16.58■□□□□ 0.24
HMGB3-205ENST00000455596 OR2D2Q9H210 308 aa16.58■□□□□ 0.24
HMGB3-205ENST00000455596 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.58■□□□□ 0.24
HMGB3-205ENST00000455596 GAB2Q9UQC2 676 aa16.58■□□□□ 0.24
HMGB3-205ENST00000455596 RRP15Q9Y3B9 282 aaKnown RBP16.58■□□□□ 0.24
HMGB3-205ENST00000455596 M0R1X1 148 aa16.57■□□□□ 0.24
HMGB3-205ENST00000455596 IGLV1-40P01703 118 aa16.57■□□□□ 0.24
HMGB3-205ENST00000455596 OR8U9P0C7N5 309 aa16.57■□□□□ 0.24
HMGB3-205ENST00000455596 KCTD21Q4G0X4 260 aa16.57■□□□□ 0.24
HMGB3-205ENST00000455596 SFXN4Q6P4A7 337 aa16.57■□□□□ 0.24
HMGB3-205ENST00000455596 Q6ZS49 121 aa16.57■□□□□ 0.24
HMGB3-205ENST00000455596 MYOZ3Q8TDC0 251 aa16.57■□□□□ 0.24
HMGB3-205ENST00000455596 TSNAXQ99598 290 aaKnown RBP16.57■□□□□ 0.24
HMGB3-205ENST00000455596 GINS4Q9BRT9 223 aa16.57■□□□□ 0.24
HMGB3-205ENST00000455596 METTL1Q9UBP6 276 aaKnown RBP16.57■□□□□ 0.24
HMGB3-205ENST00000455596 SCGNO76038 276 aa16.56■□□□□ 0.24
HMGB3-205ENST00000455596 SPDEFO95238 335 aa16.56■□□□□ 0.24
HMGB3-205ENST00000455596 IGKV1-16P04430 117 aa16.56■□□□□ 0.24
HMGB3-205ENST00000455596 SNRPBP14678 240 aaKnown RBP16.56■□□□□ 0.24
HMGB3-205ENST00000455596 DTYMKP23919 212 aa16.56■□□□□ 0.24
HMGB3-205ENST00000455596 HOXD3P31249 432 aaPredicted RBP16.56■□□□□ 0.24
HMGB3-205ENST00000455596 SDC2P34741 201 aa16.56■□□□□ 0.24
HMGB3-205ENST00000455596 CRIP2P52943 208 aaPredicted RBP16.56■□□□□ 0.24
HMGB3-205ENST00000455596 LINC00205P59089 165 aa16.56■□□□□ 0.24
HMGB3-205ENST00000455596 RPS16P62249 146 aaKnown RBP16.56■□□□□ 0.24
HMGB3-205ENST00000455596 CX3CL1P78423 397 aa16.56■□□□□ 0.24
HMGB3-205ENST00000455596 NDPQ00604 133 aa16.56■□□□□ 0.24
HMGB3-205ENST00000455596 EGFEM1PQ0D2K5 195 aa16.56■□□□□ 0.24
HMGB3-205ENST00000455596 NEDD8Q15843 81 aa16.56■□□□□ 0.24
HMGB3-205ENST00000455596 ECSCRQ19T08 205 aa16.56■□□□□ 0.24
HMGB3-205ENST00000455596 CDNFQ49AH0 187 aa16.56■□□□□ 0.24
HMGB3-205ENST00000455596 UBE2E2Q96LR5 201 aa16.56■□□□□ 0.24
HMGB3-205ENST00000455596 KLK15Q9H2R5 256 aa16.56■□□□□ 0.24
HMGB3-205ENST00000455596 SLC35D1Q9NTN3 355 aa16.56■□□□□ 0.24
HMGB3-205ENST00000455596 ELF5Q9UKW6 265 aaPredicted RBP16.56■□□□□ 0.24
HMGB3-205ENST00000455596 FBXO7Q9Y3I1 522 aa16.56■□□□□ 0.24
HMGB3-205ENST00000455596 RBM7Q9Y580 266 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms