RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 PEX14O75381 377 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 GPR12P47775 334 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 GNG2P59768 71 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 ACTBP60709 375 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 PITPNAQ00169 270 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 CD83Q01151 205 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 PNLIPRP3Q17RR3 467 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 C2orf68Q2NKX9 166 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 UBE2NLQ5JXB2 153 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 SLC35E3Q7Z769 313 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 CROCCP3Q8IVE0 287 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 GVQW1Q8N7I0 195 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 ZNF383Q8NA42 475 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 OR5AN1Q8NGI8 311 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 OR10J5Q8NHC4 309 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 ST6GALNAC5Q9BVH7 336 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 OR2D2Q9H210 308 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 DCSTAMPQ9H295 470 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 MMP27Q9H306 513 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 AUNIPQ9H7T9 357 aa8.92□□□□□ -0.98
HDAC9-217ENST00000455069 NOTCH3Q9UM47 2321 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 OR5H14A6NHG9 310 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 NDUFA3O95167 84 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 EIF4EP06730 217 aaKnown RBP8.91□□□□□ -0.98
HDAC9-217ENST00000455069 CSF1P09603 554 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 OR8U9P0C7N5 309 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 DEFA6Q01524 100 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 MMDQ15546 238 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 NSUN5P1Q3KNT7 163 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 PDLIM3Q53GG5 364 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-217ENST00000455069 GPR107Q5VW38 600 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 CENPVQ7Z7K6 275 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-217ENST00000455069 ZNF329Q86UD4 541 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 NDUFA11Q86Y39 141 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 SAMD12Q8N8I0 201 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-217ENST00000455069 NPBQ8NG41 125 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 OR8H1Q8NGG4 311 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 OR8U1Q8NH10 309 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 GHITMQ9H3K2 345 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 SDHAF2Q9NX18 166 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 ZNF107Q9UII5 783 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-217ENST00000455069 ANXA10Q9UJ72 324 aa8.91□□□□□ -0.98
HDAC9-217ENST00000455069 PSMB11A5LHX3 300 aa8.9□□□□□ -0.98
HDAC9-217ENST00000455069 M0R1X1 148 aa8.9□□□□□ -0.98
HDAC9-217ENST00000455069 NBR2O15453 112 aa8.9□□□□□ -0.98
HDAC9-217ENST00000455069 XRCC3O43542 346 aa8.9□□□□□ -0.98
HDAC9-217ENST00000455069 IGKV1-16P04430 117 aa8.9□□□□□ -0.98
HDAC9-217ENST00000455069 FCER2P06734 321 aa8.9□□□□□ -0.98
HDAC9-217ENST00000455069 NFYAP23511 347 aaPredicted RBP8.9□□□□□ -0.98
HDAC9-217ENST00000455069 NDPQ00604 133 aa8.9□□□□□ -0.98
HDAC9-217ENST00000455069 STPG2Q8N412 459 aa8.9□□□□□ -0.98
HDAC9-217ENST00000455069 FAM110DQ8TAY7 271 aaPredicted RBP8.9□□□□□ -0.98
HDAC9-217ENST00000455069 SNAPC3Q92966 411 aa8.9□□□□□ -0.98
HDAC9-217ENST00000455069 PHF21AQ96BD5 680 aa8.9□□□□□ -0.98
HDAC9-217ENST00000455069 RASL11BQ9BPW5 248 aa8.9□□□□□ -0.98
HDAC9-217ENST00000455069 GINS4Q9BRT9 223 aa8.9□□□□□ -0.98
HDAC9-217ENST00000455069 DIABLOQ9NR28 239 aa8.9□□□□□ -0.98
HDAC9-217ENST00000455069 ZNF221Q9UK13 617 aa8.9□□□□□ -0.98
HDAC9-217ENST00000455069 GAB2Q9UQC2 676 aa8.9□□□□□ -0.98
HDAC9-217ENST00000455069 WASHC3Q9Y3C0 194 aa8.9□□□□□ -0.98
HDAC9-217ENST00000455069 TNCP24821 2201 aa8.9□□□□□ -0.98
HDAC9-217ENST00000455069 IGHV7-81A0A0B4J1V7 117 aa8.89□□□□□ -0.99
HDAC9-217ENST00000455069 IGKV1D-13A0A0B4J2D9 117 aa8.89□□□□□ -0.99
HDAC9-217ENST00000455069 A0A1W2PRX2 142 aa8.89□□□□□ -0.99
HDAC9-217ENST00000455069 MEIS3P1A6NDR6 274 aa8.89□□□□□ -0.99
HDAC9-217ENST00000455069 IGLV2-14P01704 120 aa8.89□□□□□ -0.99
HDAC9-217ENST00000455069 IGKV1-13P0DP09 117 aa8.89□□□□□ -0.99
HDAC9-217ENST00000455069 TAS2R20P59543 309 aa8.89□□□□□ -0.99
HDAC9-217ENST00000455069 CFHR3Q02985 330 aa8.89□□□□□ -0.99
HDAC9-217ENST00000455069 C5orf64Q2M2E5 130 aa8.89□□□□□ -0.99
HDAC9-217ENST00000455069 CNIH2Q6PI25 160 aa8.89□□□□□ -0.99
HDAC9-217ENST00000455069 GPR141Q7Z602 305 aa8.89□□□□□ -0.99
HDAC9-217ENST00000455069 HOGA1Q86XE5 327 aa8.89□□□□□ -0.99
HDAC9-217ENST00000455069 FOXRED2Q8IWF2 684 aa8.89□□□□□ -0.99
HDAC9-217ENST00000455069 BEST4Q8NFU0 473 aa8.89□□□□□ -0.99
HDAC9-217ENST00000455069 COMMD3Q9UBI1 195 aa8.89□□□□□ -0.99
HDAC9-217ENST00000455069 ANAPC10Q9UM13 185 aa8.89□□□□□ -0.99
HDAC9-217ENST00000455069 LINC00473A8K010 186 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 H7C2Y5 167 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 J3QRK9 145 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 AP4M1O00189 453 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 RRHO14718 337 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 HPGDSO60760 199 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 TUSC2O75896 110 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 HLA-DRB1P01911 266 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 HLA-DQB1P01920 261 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 MC5RP33032 325 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 SOX6P35712 828 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 SPCS2Q15005 226 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 TMEM69Q5SWH9 247 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 C18orf65Q6ZTR6 163 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 OR4X2Q8NGF9 303 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 CHPT1Q8WUD6 406 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 DDB2Q92466 427 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 S100A16Q96FQ6 103 aaKnown RBP8.88□□□□□ -0.99
HDAC9-217ENST00000455069 FBXL15Q9H469 300 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 TPSG1Q9NRR2 321 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 FBXO7Q9Y3I1 522 aa8.88□□□□□ -0.99
HDAC9-217ENST00000455069 OR2W1Q9Y3N9 320 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms