RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 C13orf42A0A1B0GVH6 325 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 RBMY1BA6NDE4 496 aaKnown RBP4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 RBMY1EA6NEQ0 496 aaKnown RBP4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 OR5H14A6NHG9 310 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SNTNA6NMZ2 147 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 M0R1X1 148 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ZNF780AO75290 641 aaPredicted RBP4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 HLA-AP01891 365 aaKnown RBP4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CSN3P07498 182 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 RBMY1DP0C7P1 496 aaKnown RBP4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CPEP16870 476 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 MYL12AP19105 171 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 FUT3P21217 361 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 HTR2CP28335 458 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 EWSR1Q01844 656 aaKnown RBP eCLIP4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 MRPL28Q13084 256 aaKnown RBP4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 UNC119Q13432 240 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 FXYD3Q14802 87 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 TMEM30BQ3MIR4 351 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CD300EQ496F6 205 aaPredicted RBP4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 Q499Y3 187 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 C10orf55Q5SWW7 151 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ZNF660Q6AZW8 331 aaPredicted RBP4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 TRAT1Q6PIZ9 186 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 RPP25LQ8N5L8 163 aaKnown RBP4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 BVESQ8NE79 360 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 LINC00476Q8WZB0 136 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 GGHQ92820 318 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 GALMQ96C23 342 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 FLYWCH2Q96CP2 140 aaKnown RBP4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 RHOVQ96L33 236 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 TSC22D3Q99576 134 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ELOVL1Q9BW60 279 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 TINAGL1Q9GZM7 467 aaPredicted RBP4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SRD5A3Q9H8P0 318 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 COA4Q9NYJ1 87 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 STEAP1Q9UHE8 339 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 NUBP2Q9Y5Y2 271 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 S4R3C0 116 aa4.54□□□□□ -1.68
HLA-DPA3-207ENST00000454398 IGKV1-6A0A0C4DH72 117 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 LOC100130705A0A1B0GUX0 176 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 FAM90A23PA8MXZ1 464 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 PPP5D1E7EU14 171 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 BMPR1BO00238 502 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 RAB29O14966 203 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 OGG1O15527 345 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 YPEL1O60688 119 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 PROP1O75360 226 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 DEDDO75618 318 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CNIH1O95406 144 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 LY6G6CO95867 125 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 IGHV3-23P01764 117 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 IFNA6P05013 189 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 TFAP2AP05549 437 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ZP3P21754 424 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CAPGP40121 348 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 RPS16P62249 146 aaKnown RBP4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 HLA-DRB3P79483 266 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 HTD2P86397 168 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 EXOSC2Q13868 293 aaKnown RBP4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 P2RY14Q15391 338 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 GUCA2BQ16661 112 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CCDC58Q4VC31 144 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 LCN12Q6JVE5 192 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 PYHIN1Q6K0P9 492 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CD200R1LQ6Q8B3 271 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 TMPRSS11AQ6ZMR5 421 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 TCTEX1D1Q8N7M0 179 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ZNF485Q8NCK3 441 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 OR5AN1Q8NGI8 311 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CYGBQ8WWM9 190 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 MAFIPQ8WZ33 124 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 WDR89Q96FK6 387 aaPredicted RBP4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 HARBI1Q96MB7 349 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 NEDD4LQ96PU5 975 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 YPEL2Q96QA6 119 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 AGMATQ9BSE5 352 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 TMEM59Q9BXS4 323 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 C11orf54Q9H0W9 315 aaPredicted RBP4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 OR2D2Q9H210 308 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 RAB9BQ9NP90 201 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 FGF20Q9NP95 211 aaPredicted RBP4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ABRACLQ9P1F3 81 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 AK3Q9UIJ7 227 aa4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 RPL36Q9Y3U8 105 aaKnown RBP4.53□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SHISA3A0PJX4 238 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 CXorf65A6NEN9 183 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 A8MZ25 164 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 SLC22A1O15245 554 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 SOCS1O15524 211 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 CA11O75493 328 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 TPPPO94811 219 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 NAPSAO96009 420 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 IGLV2-23P01705 113 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 GNAO1P09471 354 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 SCTP09683 121 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 CELP19835 753 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 RPS27AP62979 156 aaKnown RBP4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ZNF45Q02386 682 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 TMEM267Q0VDI3 215 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms