RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, human

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGCE-208	ENST00000450385		Q6ZS49	121 aa		12.55	□□□□□ -0.4
SGCE-208	ENST00000450385	OR5M8	Q8NGP6	311 aa		12.55	□□□□□ -0.4
SGCE-208	ENST00000450385	OR10R2	Q8NGX6	335 aa		12.55	□□□□□ -0.4
SGCE-208	ENST00000450385	TSNAX	Q99598	290 aa	Known RBP	12.55	□□□□□ -0.4
SGCE-208	ENST00000450385	KCNK15	Q9H427	330 aa		12.55	□□□□□ -0.4
SGCE-208	ENST00000450385	IGHV7-81	A0A0B4J1V7	117 aa		12.54	□□□□□ -0.4
SGCE-208	ENST00000450385		H0YJW9	148 aa		12.54	□□□□□ -0.4
SGCE-208	ENST00000450385	RRH	O14718	337 aa		12.54	□□□□□ -0.4
SGCE-208	ENST00000450385	SCT	P09683	121 aa		12.54	□□□□□ -0.4
SGCE-208	ENST00000450385	CLDN12	P56749	244 aa		12.54	□□□□□ -0.4
SGCE-208	ENST00000450385	AKIRIN2	Q53H80	203 aa		12.54	□□□□□ -0.4
SGCE-208	ENST00000450385	PLAC9	Q5JTB6	97 aa		12.54	□□□□□ -0.4
SGCE-208	ENST00000450385	PYHIN1	Q6K0P9	492 aa		12.54	□□□□□ -0.4
SGCE-208	ENST00000450385	ZNF562	Q6V9R5	426 aa		12.54	□□□□□ -0.4
SGCE-208	ENST00000450385	PDPN	Q86YL7	162 aa		12.54	□□□□□ -0.4
SGCE-208	ENST00000450385	MINDY2	Q8NBR6	621 aa		12.54	□□□□□ -0.4
SGCE-208	ENST00000450385	OR10J5	Q8NHC4	309 aa		12.54	□□□□□ -0.4
SGCE-208	ENST00000450385	RAX2	Q96IS3	184 aa		12.54	□□□□□ -0.4
SGCE-208	ENST00000450385	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	12.54	□□□□□ -0.4
SGCE-208	ENST00000450385	VSIG4	Q9Y279	399 aa		12.54	□□□□□ -0.4
SGCE-208	ENST00000450385	TRAV41	A0A0B4J266	112 aa		12.53	□□□□□ -0.4
SGCE-208	ENST00000450385		H7C2Y5	167 aa		12.53	□□□□□ -0.4
SGCE-208	ENST00000450385	ARPC1B	O15143	372 aa	Known RBP	12.53	□□□□□ -0.4
SGCE-208	ENST00000450385	TMEM127	O75204	238 aa		12.53	□□□□□ -0.4
SGCE-208	ENST00000450385	TFAP2A	P05549	437 aa		12.53	□□□□□ -0.4
SGCE-208	ENST00000450385	SLC2A2	P11168	524 aa	Predicted RBP	12.53	□□□□□ -0.4
SGCE-208	ENST00000450385	INSL3	P51460	131 aa		12.53	□□□□□ -0.4
SGCE-208	ENST00000450385	HES5	Q5TA89	166 aa		12.53	□□□□□ -0.4
SGCE-208	ENST00000450385	FAM131A	Q6UXB0	335 aa		12.53	□□□□□ -0.4
SGCE-208	ENST00000450385	LCNL1	Q6ZST4	164 aa		12.53	□□□□□ -0.4
SGCE-208	ENST00000450385	C5orf24	Q7Z6I8	188 aa		12.53	□□□□□ -0.4
SGCE-208	ENST00000450385	SPART	Q8N0X7	666 aa		12.53	□□□□□ -0.4
SGCE-208	ENST00000450385	HDHD3	Q9BSH5	251 aa	Predicted RBP	12.53	□□□□□ -0.4
SGCE-208	ENST00000450385	KCNK7	Q9Y2U2	307 aa		12.53	□□□□□ -0.4
SGCE-208	ENST00000450385	TRBV6-7	A0A0A0MS04	114 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	NOTO	A8MTQ0	251 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	RAB27B	O00194	218 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	FABP7	O15540	132 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	APOA2	P02652	100 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	PRB2	P02812	416 aa	Predicted RBP	12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	HIST1H1D	P16402	221 aa	Known RBP	12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	CD40LG	P29965	261 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	TALDO1	P37837	337 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	LGALS7	P47929	136 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	RAB9A	P51151	201 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	SCAND1	P57086	179 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	PITPNA	Q00169	270 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	FHL3	Q13643	280 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	PLGLA	Q15195	96 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	RPL39P5	Q59GN2	51 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	C9orf66	Q5T8R8	295 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	ZNF491	Q8N8L2	437 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	ABHD14B	Q96IU4	210 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	RITA1	Q96K30	269 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	CABLES2	Q9BTV7	478 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	RDH8	Q9NYR8	311 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	STUB1	Q9UNE7	303 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	SSR3	Q9UNL2	185 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	NUBP2	Q9Y5Y2	271 aa		12.52	□□□□□ -0.41
SGCE-208	ENST00000450385	MFNG	O00587	321 aa		12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	ATP6V0E1	O15342	81 aa		12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	FCGR3A	P08637	254 aa		12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	CTXN2	P0C2S0	81 aa		12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	OR8U8	P0C7N1	319 aa		12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	RRAS	P10301	218 aa		12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	DTYMK	P23919	212 aa		12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	LUM	P51884	338 aa	Predicted RBP	12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	CX3CL1	P78423	397 aa		12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	CBX3	Q13185	183 aa		12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	C18orf65	Q6ZTR6	163 aa		12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	FLYWCH2	Q96CP2	140 aa	Known RBP	12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	CYYR1	Q96J86	154 aa		12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	TMEM68	Q96MH6	324 aa		12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	DCSTAMP	Q9H295	470 aa		12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	PARP11	Q9NR21	331 aa		12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	OR1A1	Q9P1Q5	309 aa		12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	FOXA2	Q9Y261	457 aa	Predicted RBP	12.51	□□□□□ -0.41
SGCE-208	ENST00000450385	IGKV1-6	A0A0C4DH72	117 aa		12.5	□□□□□ -0.41
SGCE-208	ENST00000450385		I3L521	148 aa		12.5	□□□□□ -0.41
SGCE-208	ENST00000450385	PROP1	O75360	226 aa		12.5	□□□□□ -0.41
SGCE-208	ENST00000450385	SLC22A5	O76082	557 aa		12.5	□□□□□ -0.41
SGCE-208	ENST00000450385	CNTFR	P26992	372 aa		12.5	□□□□□ -0.41
SGCE-208	ENST00000450385	KRTAP10-11	P60412	298 aa		12.5	□□□□□ -0.41
SGCE-208	ENST00000450385	DGCR2	P98153	550 aa		12.5	□□□□□ -0.41
SGCE-208	ENST00000450385	KIAA0141	Q14154	515 aa	Predicted RBP	12.5	□□□□□ -0.41
SGCE-208	ENST00000450385	C19orf54	Q5BKX5	351 aa		12.5	□□□□□ -0.41
SGCE-208	ENST00000450385	C22orf42	Q6IC83	251 aa		12.5	□□□□□ -0.41
SGCE-208	ENST00000450385	ADTRP	Q96IZ2	230 aa		12.5	□□□□□ -0.41
SGCE-208	ENST00000450385	TXNL4B	Q9NX01	149 aa	Known RBP	12.5	□□□□□ -0.41
SGCE-208	ENST00000450385	SHISA3	A0PJX4	238 aa		12.49	□□□□□ -0.41
SGCE-208	ENST00000450385		K7EIL1	84 aa		12.49	□□□□□ -0.41
SGCE-208	ENST00000450385	GNB3	P16520	340 aa		12.49	□□□□□ -0.41
SGCE-208	ENST00000450385	PSMB9	P28065	219 aa		12.49	□□□□□ -0.41
SGCE-208	ENST00000450385	OR10A3	P58181	314 aa		12.49	□□□□□ -0.41
SGCE-208	ENST00000450385	RPS16	P62249	146 aa	Known RBP	12.49	□□□□□ -0.41
SGCE-208	ENST00000450385	ZNF616	Q08AN1	781 aa		12.49	□□□□□ -0.41
SGCE-208	ENST00000450385	ARFRP1	Q13795	201 aa		12.49	□□□□□ -0.41
SGCE-208	ENST00000450385	ZNF773	Q6PK81	442 aa		12.49	□□□□□ -0.41
SGCE-208	ENST00000450385	OR11H1	Q8NG94	326 aa		12.49	□□□□□ -0.41
SGCE-208	ENST00000450385	PARP12	Q9H0J9	701 aa	Known RBP	12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms