RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 RNF150Q9ULK6 438 aa11.56□□□□□ -0.56
USP39-206ENST00000448971 DNAH3Q8TD57 4116 aa11.55□□□□□ -0.56
USP39-206ENST00000448971 TRBV6-7A0A0A0MS04 114 aa11.55□□□□□ -0.56
USP39-206ENST00000448971 DIRAS3O95661 229 aa11.55□□□□□ -0.56
USP39-206ENST00000448971 SRSF7Q16629 238 aaKnown RBP eCLIP11.55□□□□□ -0.56
USP39-206ENST00000448971 GLDNQ6ZMI3 551 aaPredicted RBP11.55□□□□□ -0.56
USP39-206ENST00000448971 SLC35E3Q7Z769 313 aa11.55□□□□□ -0.56
USP39-206ENST00000448971 ANKRD13BQ86YJ7 626 aa11.55□□□□□ -0.56
USP39-206ENST00000448971 LINC00528Q8N1L1 170 aa11.55□□□□□ -0.56
USP39-206ENST00000448971 OR8H1Q8NGG4 311 aa11.55□□□□□ -0.56
USP39-206ENST00000448971 RASL11BQ9BPW5 248 aa11.55□□□□□ -0.56
USP39-206ENST00000448971 ZNF251Q9BRH9 671 aa11.55□□□□□ -0.56
USP39-206ENST00000448971 WNT10AQ9GZT5 417 aa11.55□□□□□ -0.56
USP39-206ENST00000448971 DCSTAMPQ9H295 470 aa11.55□□□□□ -0.56
USP39-206ENST00000448971 LIN7CQ9NUP9 197 aaKnown RBP11.55□□□□□ -0.56
USP39-206ENST00000448971 IGKV1D-8A0A087WSZ0 117 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 OR5H14A6NHG9 310 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 H7C2Y5 167 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 PRB2P02812 416 aaPredicted RBP11.54□□□□□ -0.56
USP39-206ENST00000448971 OPN1MWP04001 364 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 OR8U9P0C7N5 309 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 OPN1MW2P0DN77 364 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 OPN1MW3P0DN78 364 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 CD28P10747 220 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 ACTBP60709 375 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 KHDC1LQ5JSQ8 128 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 TMEM69Q5SWH9 247 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 Q6ZS49 121 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 CENPVQ7Z7K6 275 aaPredicted RBP11.54□□□□□ -0.56
USP39-206ENST00000448971 FOXRED2Q8IWF2 684 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 Q8N9W7 124 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 OR4X2Q8NGF9 303 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 OR8U1Q8NH10 309 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 S100A16Q96FQ6 103 aaKnown RBP11.54□□□□□ -0.56
USP39-206ENST00000448971 AGMATQ9BSE5 352 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 ABCG5Q9H222 651 aa11.54□□□□□ -0.56
USP39-206ENST00000448971 M0R1X1 148 aa11.53□□□□□ -0.56
USP39-206ENST00000448971 SSX5O60225 188 aa11.53□□□□□ -0.56
USP39-206ENST00000448971 APOA2P02652 100 aa11.53□□□□□ -0.56
USP39-206ENST00000448971 ARPC4P59998 168 aa11.53□□□□□ -0.56
USP39-206ENST00000448971 NSUN5P1Q3KNT7 163 aa11.53□□□□□ -0.56
USP39-206ENST00000448971 DRAXINQ8NBI3 349 aaPredicted RBP11.53□□□□□ -0.56
USP39-206ENST00000448971 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.53□□□□□ -0.56
USP39-206ENST00000448971 OR5AU1Q8NGC0 362 aa11.53□□□□□ -0.56
USP39-206ENST00000448971 TOLLIPQ9H0E2 274 aa11.53□□□□□ -0.56
USP39-206ENST00000448971 KIAA1456Q9P272 454 aa11.53□□□□□ -0.56
USP39-206ENST00000448971 COMMD3Q9UBI1 195 aa11.53□□□□□ -0.56
USP39-206ENST00000448971 WASHC3Q9Y3C0 194 aa11.53□□□□□ -0.56
USP39-206ENST00000448971 PSMB11A5LHX3 300 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 H0YJW9 148 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 NBR2O15453 112 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 NOL3O60936 208 aaKnown RBP11.52□□□□□ -0.57
USP39-206ENST00000448971 TFAP2AP05549 437 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 FCER2P06734 321 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 CTXN2P0C2S0 81 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 CT45A6P0DMU7 189 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 CT45A5P0DMU8 189 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 CT45A7P0DMV0 189 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 PTHLHP12272 177 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 ALDH3B2P48448 385 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 RORCP51449 518 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 F2RL1P55085 397 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 CTF1Q16619 201 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 H1FOOQ8IZA3 346 aaPredicted RBP11.52□□□□□ -0.57
USP39-206ENST00000448971 FAM71E2Q8N5Q1 922 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 BEST4Q8NFU0 473 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 ACOT12Q8WYK0 555 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 AP3S1Q92572 193 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 CITED2Q99967 270 aaPredicted RBP11.52□□□□□ -0.57
USP39-206ENST00000448971 AUNIPQ9H7T9 357 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 IFT46Q9NQC8 304 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 ANXA10Q9UJ72 324 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 LINC00527Q9UJ94 153 aa11.52□□□□□ -0.57
USP39-206ENST00000448971 MEIS3P1A6NDR6 274 aa11.51□□□□□ -0.57
USP39-206ENST00000448971 J3QRK9 145 aa11.51□□□□□ -0.57
USP39-206ENST00000448971 XRCC3O43542 346 aa11.51□□□□□ -0.57
USP39-206ENST00000448971 IGHG2P01859 326 aa11.51□□□□□ -0.57
USP39-206ENST00000448971 EIF4EP06730 217 aaKnown RBP11.51□□□□□ -0.57
USP39-206ENST00000448971 NFYAP23511 347 aaPredicted RBP11.51□□□□□ -0.57
USP39-206ENST00000448971 CNTFRP26992 372 aa11.51□□□□□ -0.57
USP39-206ENST00000448971 MC5RP33032 325 aa11.51□□□□□ -0.57
USP39-206ENST00000448971 SOX6P35712 828 aa11.51□□□□□ -0.57
USP39-206ENST00000448971 TAS2R20P59543 309 aa11.51□□□□□ -0.57
USP39-206ENST00000448971 PLGLAQ15195 96 aa11.51□□□□□ -0.57
USP39-206ENST00000448971 CNIH2Q6PI25 160 aa11.51□□□□□ -0.57
USP39-206ENST00000448971 NDUFA11Q86Y39 141 aa11.51□□□□□ -0.57
USP39-206ENST00000448971 CLVS1Q8IUQ0 354 aaPredicted RBP11.51□□□□□ -0.57
USP39-206ENST00000448971 GVQW1Q8N7I0 195 aa11.51□□□□□ -0.57
USP39-206ENST00000448971 WIPF2Q8TF74 440 aaPredicted RBP11.51□□□□□ -0.57
USP39-206ENST00000448971 CHPT1Q8WUD6 406 aa11.51□□□□□ -0.57
USP39-206ENST00000448971 NOL4LQ96MY1 436 aaPredicted RBP11.51□□□□□ -0.57
USP39-206ENST00000448971 SDHAF2Q9NX18 166 aa11.51□□□□□ -0.57
USP39-206ENST00000448971 ZNF107Q9UII5 783 aaPredicted RBP11.51□□□□□ -0.57
USP39-206ENST00000448971 A0A1W2PRX2 142 aa11.5□□□□□ -0.57
USP39-206ENST00000448971 AP4M1O00189 453 aa11.5□□□□□ -0.57
USP39-206ENST00000448971 CBX5P45973 191 aa11.5□□□□□ -0.57
USP39-206ENST00000448971 SLC35B1P78383 322 aa11.5□□□□□ -0.57
USP39-206ENST00000448971 CBX3Q13185 183 aa11.5□□□□□ -0.57
USP39-206ENST00000448971 MZT2AQ6P582 158 aa11.5□□□□□ -0.57
USP39-206ENST00000448971 C10orf99Q6UWK7 81 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms